##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547621_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2931986 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.313068684502586 31.0 31.0 33.0 30.0 34.0 2 31.724247319052683 31.0 31.0 34.0 30.0 34.0 3 31.848308961911822 31.0 31.0 34.0 30.0 34.0 4 35.623052770374755 37.0 35.0 37.0 33.0 37.0 5 35.53471264869614 37.0 35.0 37.0 33.0 37.0 6 35.57854710083882 37.0 35.0 37.0 33.0 37.0 7 35.92051496835251 37.0 35.0 37.0 35.0 37.0 8 35.94029200685133 37.0 35.0 37.0 35.0 37.0 9 37.75268060625119 39.0 37.0 39.0 35.0 39.0 10 37.15380905638703 39.0 37.0 39.0 33.0 39.0 11 36.87665937013342 39.0 37.0 39.0 32.0 39.0 12 36.38607005626903 38.0 35.0 39.0 32.0 39.0 13 36.21857164393009 38.0 35.0 39.0 32.0 39.0 14 37.22249014831585 39.0 35.0 41.0 32.0 41.0 15 37.42289833580379 39.0 35.0 41.0 32.0 41.0 16 37.489497562403095 39.0 35.0 41.0 32.0 41.0 17 37.38900901982479 39.0 35.0 41.0 32.0 41.0 18 37.292764699422165 39.0 35.0 41.0 32.0 41.0 19 37.25549473974296 39.0 35.0 41.0 32.0 41.0 20 37.11955138939954 39.0 35.0 41.0 32.0 41.0 21 36.96112498490784 39.0 35.0 41.0 31.0 41.0 22 36.918775533034605 39.0 35.0 41.0 31.0 41.0 23 36.85137343766307 38.0 35.0 41.0 31.0 41.0 24 36.77509544724975 38.0 35.0 41.0 31.0 41.0 25 36.66759288755131 38.0 35.0 40.0 31.0 41.0 26 36.54915473675522 38.0 35.0 40.0 31.0 41.0 27 36.46806396756328 38.0 35.0 40.0 31.0 41.0 28 36.484734238158026 38.0 35.0 40.0 31.0 41.0 29 36.48780860481598 38.0 35.0 40.0 31.0 41.0 30 36.49437582580544 38.0 35.0 40.0 30.0 41.0 31 36.414664326500876 38.0 35.0 41.0 30.0 41.0 32 36.31284903816048 38.0 35.0 41.0 30.0 41.0 33 36.20098015474835 38.0 35.0 41.0 30.0 41.0 34 36.10127197060286 38.0 35.0 41.0 30.0 41.0 35 35.92054395894114 38.0 35.0 41.0 29.0 41.0 36 35.81342543927563 38.0 35.0 41.0 29.0 41.0 37 35.77793311427817 38.0 35.0 41.0 29.0 41.0 38 35.67756326258038 38.0 35.0 40.0 28.0 41.0 39 35.603695924878224 38.0 35.0 40.0 27.0 41.0 40 35.522685306137205 38.0 34.0 40.0 27.0 41.0 41 35.43678687415288 38.0 34.0 40.0 27.0 41.0 42 35.402361402817064 38.0 34.0 40.0 27.0 41.0 43 35.36818627374073 38.0 34.0 40.0 27.0 41.0 44 35.23814677150573 38.0 34.0 40.0 27.0 41.0 45 35.14116302056013 38.0 34.0 40.0 26.0 41.0 46 35.11705137746224 38.0 34.0 40.0 26.0 41.0 47 35.07601912151013 37.0 34.0 40.0 26.0 41.0 48 34.954127680009385 37.0 34.0 40.0 26.0 41.0 49 34.87259284321276 37.0 34.0 40.0 26.0 41.0 50 34.80106760400629 37.0 34.0 40.0 26.0 41.0 51 34.35579262656779 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 6.0 11 5.0 12 7.0 13 11.0 14 28.0 15 74.0 16 200.0 17 475.0 18 1053.0 19 2067.0 20 3689.0 21 6035.0 22 9440.0 23 14170.0 24 20930.0 25 29681.0 26 39890.0 27 46972.0 28 52621.0 29 59796.0 30 71515.0 31 86660.0 32 107164.0 33 137907.0 34 219637.0 35 313577.0 36 218134.0 37 281401.0 38 431591.0 39 776963.0 40 280.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.225475155747674 23.35451124255027 27.55725982320516 13.862753778496895 2 32.02569862202616 25.50165655634099 28.990008819960263 13.482636001672589 3 29.4576781744524 25.753670037987902 31.14626058923883 13.642391198320865 4 25.95476240336755 28.597953741934646 30.71501705669809 14.732266797999719 5 23.565119342316095 32.600462621581414 29.239464308492607 14.594953727609886 6 21.86002934529701 41.03344968222904 26.97816428864258 10.128356683831369 7 88.69687645166108 3.3391359986029947 6.365889878055351 1.5980976716805606 8 88.94043150274251 3.038077262306164 6.174142714187584 1.8473485207637415 9 83.77574108471187 5.615886296864992 7.9773573270813705 2.631015291341773 10 40.110355233619806 36.147546407111086 13.564832847087263 10.177265512181846 11 32.643812078229566 24.326582732659705 27.364625888391007 15.664979300719716 12 32.151927055586214 23.011092140276247 28.73990530650556 16.09707549763198 13 23.441107836122 30.10525971133559 29.621253307485095 16.83237914505731 14 18.574474775800432 32.90636449150849 30.58561671167598 17.93354402101511 15 17.56062273148644 26.92795941044739 38.59864951606181 16.912768342004362 16 21.81852164369134 25.22716684186077 35.95839134293274 16.995920171515145 17 21.396589206087615 24.793604062229495 29.59717406563333 24.212632666049565 18 23.241379733736792 26.018507591782498 32.42761050018657 18.31250217429415 19 25.772428654161377 27.254359331865842 28.244200347477783 18.729011666494998 20 27.27833625399303 27.29538954142346 28.095154615335815 17.3311195892477 21 24.481733541701768 27.453337089604112 30.38742340515951 17.677505963534614 22 23.701920814083014 24.361371439017784 30.39710967241999 21.539598074479212 23 20.562342384990924 28.253716081863967 29.566955640306603 21.616985892838507 24 20.437000722377256 26.64190756708934 34.537238581630334 18.38385312890307 25 20.222095194178962 28.497714518418572 31.449092867428423 19.83109741997404 26 19.67110347730173 32.07051466139333 28.463164558084518 19.79521730322041 27 18.825396847051792 30.768769018678803 31.43701913992768 18.96881499434172 28 18.281840363494233 29.02241006607808 33.881983065403446 18.81376650502424 29 18.82212261586515 26.847877172674085 34.05821173770953 20.27178847375124 30 20.30030157033492 29.140043642773193 31.66055363156577 18.899101155326118 31 24.64599080623168 27.569674616454513 29.0992521792396 18.685082398074208 32 25.033577922950517 27.64798331233505 28.41541535327931 18.903023411435115 33 24.10710692343006 28.571589359567202 27.733965987559284 19.587337729443455 34 20.04115981454209 28.648124513554972 29.63718107794512 21.673534593957815 35 21.143927699518347 28.450749764835166 30.38285312412815 20.022469411518337 36 25.0233118439174 28.182740299578512 28.21125339616219 18.582694460341898 37 21.052419759166654 30.622758771699456 29.400413235261013 18.924408233872878 38 21.05859304921647 30.617642785470327 28.025577202619655 20.298186962693546 39 20.488126478093687 30.582342480489334 28.70729942093857 20.222231620478407 40 23.440357491475062 28.038128422168455 28.257501911673522 20.264012174682964 41 19.823355227480622 26.998594126984237 29.499015343183764 23.679035302351377 42 21.89567071602661 27.217012632393196 27.9099900204162 22.977326631163997 43 21.443656279395604 27.514626604629083 28.63206031679551 22.409656799179807 44 20.2884665888582 29.810237838789135 29.010404551727053 20.89089102062561 45 19.376524990228468 32.32327848768718 27.078539938458096 21.221656583626253 46 21.581242202384324 30.425793301877974 27.668754216425317 20.324210279312386 47 20.441639216558332 28.846761205544635 29.45696193638032 21.254637641516705 48 21.463915584862956 27.573392233114348 30.738038994729173 20.22465318729353 49 20.993585917531664 26.901015216307307 30.602669999106407 21.502728867054618 50 19.56892017901859 30.406761833105616 29.69123999909959 20.333077988776207 51 19.40128636357745 30.863278337618254 27.98891263464423 21.74652266416006 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1532.0 1 2655.5 2 3779.0 3 15254.5 4 26730.0 5 19270.0 6 11810.0 7 11707.0 8 11604.0 9 12275.5 10 12947.0 11 13121.5 12 13296.0 13 13349.0 14 13402.0 15 13072.5 16 12743.0 17 12587.0 18 12431.0 19 12797.0 20 13163.0 21 14843.0 22 16523.0 23 17984.0 24 19445.0 25 22793.5 26 32575.5 27 39009.0 28 45476.0 29 51943.0 30 62208.5 31 72474.0 32 81747.0 33 91020.0 34 102359.5 35 113699.0 36 120039.5 37 126380.0 38 134590.5 39 142801.0 40 165874.5 41 188948.0 42 215387.5 43 241827.0 44 245697.5 45 249568.0 46 246038.5 47 242509.0 48 233673.5 49 224838.0 50 218533.5 51 212229.0 52 192199.0 53 172169.0 54 156236.5 55 140304.0 56 126472.0 57 112640.0 58 99932.0 59 87224.0 60 78143.5 61 69063.0 62 59264.5 63 49466.0 64 43072.5 65 36679.0 66 31163.0 67 25647.0 68 21645.5 69 17644.0 70 14346.5 71 11049.0 72 9293.0 73 7537.0 74 6044.5 75 3645.0 76 2738.0 77 2195.0 78 1652.0 79 1042.5 80 433.0 81 348.0 82 263.0 83 172.5 84 82.0 85 58.0 86 34.0 87 22.0 88 10.0 89 7.5 90 5.0 91 3.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2931986.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.148277526675447 #Duplication Level Percentage of deduplicated Percentage of total 1 77.72964058362261 14.106590893603176 2 7.551577475993766 2.740962475970523 3 2.68331372124741 1.460925663130027 4 1.4106827448542758 1.0240584782283073 5 0.8658418498581132 0.7856769092717547 6 0.6463125234224877 0.7037675426422337 7 0.4849798967486465 0.6161084832736987 8 0.37286781176638034 0.541352682296036 9 0.3457123703836538 0.5646675637914627 >10 4.751855748497605 22.106623611960313 >50 2.004148355924585 26.097862787436206 >100 1.1483014141413788 28.073433341869286 >500 0.004003022972859714 0.46086489575261536 >1k 5.718604246942448E-4 0.18255397499523732 >5k 0.0 0.0 >10k+ 1.9062014156474825E-4 0.5345506957791182 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15452 0.5270147947500432 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.821314972172446E-5 0.0 0.0 0.02298783145622114 0.0 2 6.821314972172446E-5 0.0 0.0 0.07704675261068777 0.0 3 6.821314972172446E-5 0.0 0.0 0.13451633125124063 0.0 4 6.821314972172446E-5 0.0 0.0 0.24863693073568563 0.0 5 6.821314972172446E-5 0.0 0.0 0.43346045990669807 0.0 6 6.821314972172446E-5 0.0 0.0 0.777595800252798 0.0 7 6.821314972172446E-5 0.0 0.0 0.9410004004111888 0.0 8 6.821314972172446E-5 0.0 0.0 1.3891266875080577 0.0 9 6.821314972172446E-5 0.0 0.0 1.584864320634546 0.0 10 6.821314972172446E-5 0.0 0.0 1.8712572297412062 0.0 11 6.821314972172446E-5 0.0 0.0 2.1630389776758827 0.0 12 6.821314972172446E-5 0.0 0.0 2.403319797570657 0.0 13 6.821314972172446E-5 0.0 0.0 2.5178496759534323 0.0 14 6.821314972172446E-5 0.0 0.0 2.5768881570375846 0.0 15 6.821314972172446E-5 0.0 0.0 2.64117905065031 0.0 16 6.821314972172446E-5 0.0 0.0 2.7702383299238127 0.0 17 6.821314972172446E-5 0.0 0.0 2.9125991733930516 0.0 18 6.821314972172446E-5 0.0 0.0 3.089066591723153 0.0 19 6.821314972172446E-5 0.0 0.0 3.1994695745477637 0.0 20 6.821314972172446E-5 0.0 0.0 3.321980391447981 0.0 21 6.821314972172446E-5 0.0 0.0 3.4776086925380953 0.0 22 6.821314972172446E-5 0.0 0.0 3.6500515350346148 0.0 23 6.821314972172446E-5 0.0 0.0 3.8391724926380957 0.0 24 6.821314972172446E-5 0.0 0.0 3.981192270358726 0.0 25 6.821314972172446E-5 0.0 0.0 4.109126032661821 0.0 26 6.821314972172446E-5 0.0 0.0 4.229078856447472 0.0 27 6.821314972172446E-5 0.0 0.0 4.365266409866896 0.0 28 6.821314972172446E-5 0.0 0.0 4.502886439430474 0.0 29 6.821314972172446E-5 0.0 0.0 4.658855806269198 0.0 30 6.821314972172446E-5 0.0 0.0 4.868338389064614 0.0 31 6.821314972172446E-5 0.0 0.0 5.04265709317848 0.0 32 6.821314972172446E-5 0.0 0.0 5.211450532164887 0.0 33 6.821314972172446E-5 0.0 0.0 5.3728769509813485 0.0 34 6.821314972172446E-5 0.0 0.0 5.555210700187518 0.0 35 6.821314972172446E-5 0.0 0.0 5.763192593689056 0.0 36 6.821314972172446E-5 0.0 0.0 5.949209852980198 0.0 37 6.821314972172446E-5 0.0 0.0 6.138399023733401 0.0 38 6.821314972172446E-5 0.0 0.0 6.367970379121865 0.0 39 6.821314972172446E-5 0.0 0.0 6.756307840487642 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 9765 0.0 41.45161 1 TATCACG 60 3.6379788E-12 41.250004 1 TACGGGA 1245 0.0 40.120483 4 CGGGATC 760 0.0 39.967106 6 ACGGGTA 160 0.0 39.375 5 GTTAGCG 180 0.0 38.750004 1 ACGGGAT 1260 0.0 38.749996 5 ACACGAC 495 0.0 38.636364 26 AGGGCGA 2280 0.0 37.796055 6 TAAGGGA 3570 0.0 37.563026 4 TTAACGC 30 1.1403536E-4 37.500004 42 CGAGGGA 2040 0.0 37.5 4 AATGCGG 415 0.0 37.40964 2 TAGGGCG 905 0.0 37.292816 5 GTACGGG 965 0.0 37.07254 3 AACGGGA 1165 0.0 36.888412 4 TAACGGG 910 0.0 36.84066 3 ATAGGGA 4105 0.0 36.833126 4 GGGCGAT 4370 0.0 36.8135 7 AGGGATT 5390 0.0 36.56772 6 >>END_MODULE