##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547619_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2025000 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.208143209876543 31.0 31.0 33.0 30.0 34.0 2 31.613866666666667 31.0 31.0 34.0 30.0 34.0 3 31.667220740740742 31.0 31.0 34.0 30.0 34.0 4 35.51281925925926 37.0 35.0 37.0 33.0 37.0 5 35.427751111111114 37.0 35.0 37.0 33.0 37.0 6 35.478476049382714 37.0 35.0 37.0 33.0 37.0 7 35.83572148148148 37.0 35.0 37.0 35.0 37.0 8 35.85761086419753 37.0 35.0 37.0 35.0 37.0 9 37.65899901234568 39.0 37.0 39.0 35.0 39.0 10 37.03274074074074 39.0 37.0 39.0 33.0 39.0 11 36.76593283950617 39.0 35.0 39.0 32.0 39.0 12 36.30611259259259 38.0 35.0 39.0 32.0 39.0 13 36.14184098765432 38.0 35.0 39.0 32.0 39.0 14 37.141953086419754 39.0 35.0 41.0 31.0 41.0 15 37.34474765432099 39.0 35.0 41.0 32.0 41.0 16 37.41086765432099 39.0 35.0 41.0 32.0 41.0 17 37.31433827160494 39.0 35.0 41.0 32.0 41.0 18 37.18006222222222 39.0 35.0 41.0 32.0 41.0 19 37.09312197530864 39.0 35.0 41.0 32.0 41.0 20 36.90439061728395 38.0 35.0 41.0 31.0 41.0 21 36.73251851851852 38.0 35.0 41.0 31.0 41.0 22 36.68840345679013 38.0 35.0 41.0 31.0 41.0 23 36.61642419753086 38.0 35.0 40.0 31.0 41.0 24 36.5145175308642 38.0 35.0 40.0 31.0 41.0 25 36.37943012345679 38.0 35.0 40.0 30.0 41.0 26 36.259460246913584 38.0 35.0 40.0 30.0 41.0 27 36.175054320987655 38.0 35.0 40.0 30.0 41.0 28 36.159555555555556 38.0 35.0 40.0 30.0 41.0 29 36.16507851851852 38.0 35.0 40.0 30.0 41.0 30 36.12422814814815 38.0 35.0 40.0 30.0 41.0 31 36.003329382716046 38.0 35.0 40.0 30.0 41.0 32 35.85168839506173 38.0 35.0 40.0 29.0 41.0 33 35.65003160493827 38.0 34.0 40.0 28.0 41.0 34 35.45691358024691 38.0 34.0 40.0 27.0 41.0 35 35.216394074074074 38.0 34.0 40.0 25.0 41.0 36 35.11445777777778 38.0 34.0 40.0 25.0 41.0 37 35.075253827160495 38.0 34.0 40.0 25.0 41.0 38 34.962522962962964 38.0 34.0 40.0 24.0 41.0 39 34.87735851851852 38.0 34.0 40.0 24.0 41.0 40 34.78425432098766 38.0 34.0 40.0 24.0 41.0 41 34.6731387654321 38.0 34.0 40.0 23.0 41.0 42 34.64169283950617 38.0 34.0 40.0 23.0 41.0 43 34.59028938271605 37.0 33.0 40.0 23.0 41.0 44 34.437906172839504 37.0 33.0 40.0 23.0 41.0 45 34.344236049382715 37.0 33.0 40.0 23.0 41.0 46 34.31086024691358 37.0 33.0 40.0 23.0 41.0 47 34.24763901234568 37.0 33.0 40.0 23.0 41.0 48 34.09163111111111 37.0 33.0 40.0 23.0 41.0 49 34.01634271604938 36.0 33.0 40.0 23.0 41.0 50 33.92320740740741 36.0 33.0 40.0 22.0 41.0 51 33.493912098765435 36.0 32.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 5.0 12 8.0 13 5.0 14 23.0 15 62.0 16 150.0 17 420.0 18 1022.0 19 2008.0 20 3495.0 21 5711.0 22 8580.0 23 12930.0 24 18971.0 25 27808.0 26 36680.0 27 41659.0 28 43802.0 29 47474.0 30 54223.0 31 64029.0 32 78279.0 33 99419.0 34 153791.0 35 207345.0 36 155948.0 37 193681.0 38 286872.0 39 480456.0 40 140.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.87713580246914 22.111703703703704 27.655506172839505 17.355654320987654 2 33.65046913580247 24.839555555555556 28.558123456790124 12.95185185185185 3 28.331012345679014 24.732888888888887 33.35575308641975 13.580345679012346 4 25.524691358024693 27.14464197530864 33.13802469135803 14.192641975308643 5 22.476493827160493 30.948395061728394 32.370172839506175 14.204938271604938 6 21.19041975308642 39.84325925925926 28.886469135802468 10.079851851851853 7 85.576 3.344 9.308148148148149 1.7718518518518518 8 85.6472098765432 2.8058765432098767 9.24079012345679 2.3061234567901234 9 80.4679012345679 5.124740740740741 11.233975308641975 3.1733827160493826 10 39.867703703703704 30.60627160493827 17.58804938271605 11.937975308641976 11 31.514074074074074 23.558074074074074 28.85032098765432 16.07753086419753 12 31.466024691358026 21.330617283950616 29.98014814814815 17.223209876543212 13 23.43683950617284 27.31827160493827 30.72854320987654 18.516345679012343 14 18.056 30.134172839506174 32.44730864197531 19.362518518518517 15 17.755259259259258 26.28775308641975 38.78113580246914 17.17585185185185 16 20.7479012345679 24.46385185185185 37.28276543209876 17.505481481481482 17 21.150962962962964 25.026172839506174 30.467209876543212 23.355654320987654 18 22.37916049382716 25.78967901234568 33.10681481481482 18.724345679012348 19 24.51837037037037 27.612592592592595 28.99708641975309 18.87195061728395 20 25.89595061728395 26.71639506172839 29.415703703703706 17.971950617283948 21 23.274666666666665 27.154913580246916 31.447407407407407 18.12301234567901 22 22.657283950617284 23.758814814814816 31.552641975308642 22.031259259259258 23 20.64320987654321 27.028049382716052 30.861234567901235 21.467506172839506 24 21.04888888888889 25.42987654320988 34.85911111111111 18.662123456790123 25 20.525975308641975 27.28977777777778 31.566271604938272 20.617975308641974 26 19.30069135802469 30.462123456790124 29.709382716049383 20.527802469135803 27 18.850716049382715 30.01916049382716 31.31516049382716 19.814962962962962 28 17.940345679012346 27.970320987654322 34.28148148148148 19.80785185185185 29 18.754765432098765 25.688296296296297 34.292 21.26493827160494 30 20.537037037037038 27.038716049382717 32.28493827160494 20.13930864197531 31 23.161086419753087 26.53051851851852 29.178962962962963 21.129432098765434 32 24.12706172839506 26.512493827160494 28.45293827160494 20.907506172839508 33 22.951802469135803 26.916543209876544 29.19649382716049 20.93516049382716 34 19.827012345679012 26.812493827160495 30.628345679012348 22.73214814814815 35 20.476395061728393 26.718666666666667 31.39856790123457 21.40637037037037 36 23.233481481481483 27.24330864197531 29.616641975308646 19.906567901234567 37 20.728444444444445 29.659506172839507 29.81076543209877 19.801283950617286 38 20.409777777777776 28.822074074074074 29.922024691358022 20.84612345679012 39 20.369827160493827 29.441728395061727 29.12785185185185 21.06059259259259 40 22.844444444444445 26.824049382716048 30.15906172839506 20.172444444444444 41 19.028444444444446 26.57333333333333 30.95259259259259 23.44562962962963 42 21.641975308641975 26.671308641975312 28.719555555555555 22.96716049382716 43 21.22098765432099 27.102666666666668 29.2679012345679 22.408444444444445 44 20.325333333333333 28.99545679012346 28.93738271604938 21.741827160493827 45 19.515654320987654 30.310765432098762 27.8641975308642 22.309382716049384 46 21.119654320987653 29.53940740740741 28.273827160493823 21.06711111111111 47 20.570617283950618 27.71762962962963 29.893185185185185 21.818567901234566 48 20.65441975308642 26.910271604938274 30.918913580246915 21.516395061728392 49 20.52874074074074 26.313135802469134 30.57372839506173 22.584395061728397 50 19.541382716049384 28.080246913580247 31.06888888888889 21.30948148148148 51 19.258320987654322 29.26681481481481 29.01762962962963 22.457234567901235 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1402.0 1 2010.5 2 2619.0 3 17901.0 4 33183.0 5 23160.5 6 13138.0 7 12893.0 8 12648.0 9 13267.0 10 13886.0 11 14394.5 12 14903.0 13 14600.0 14 14297.0 15 13620.5 16 12944.0 17 12417.5 18 11891.0 19 11534.0 20 11177.0 21 11738.5 22 12300.0 23 12677.0 24 13054.0 25 14910.0 26 19415.5 27 22065.0 28 26327.5 29 30590.0 30 34517.5 31 38445.0 32 45069.0 33 51693.0 34 58661.0 35 65629.0 36 69480.0 37 73331.0 38 82151.0 39 90971.0 40 103849.5 41 116728.0 42 131020.0 43 145312.0 44 149377.5 45 153443.0 46 159499.0 47 165555.0 48 166669.5 49 167784.0 50 160739.0 51 153694.0 52 140170.0 53 126646.0 54 112237.0 55 97828.0 56 89230.0 57 80632.0 58 73935.0 59 67238.0 60 61123.5 61 55009.0 62 49237.0 63 43465.0 64 37470.5 65 31476.0 66 26885.0 67 22294.0 68 18616.0 69 14938.0 70 12731.0 71 10524.0 72 8478.5 73 6433.0 74 5258.5 75 3266.0 76 2448.0 77 1905.5 78 1363.0 79 1000.0 80 637.0 81 466.5 82 296.0 83 229.5 84 163.0 85 101.5 86 40.0 87 29.0 88 18.0 89 16.0 90 14.0 91 8.0 92 2.0 93 2.0 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2025000.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.15213871021779 #Duplication Level Percentage of deduplicated Percentage of total 1 77.54174490377093 17.95257233844428 2 7.089225313788866 3.282614556256542 3 2.644636054973641 1.8368694234837877 4 1.4652197787667796 1.3569188623585244 5 0.9981443318201203 1.155458801155854 6 0.7295253682600088 1.0134043511147066 7 0.542715920061962 0.8795523983062612 8 0.4655831953874846 0.8623397376605982 9 0.3851202006206005 0.8024720674387543 >10 6.167099851249292 35.80881215610729 >50 1.805194268687296 28.38292865485461 >100 0.16189494799294202 4.8531851509372785 >500 0.002597243080082663 0.43304869034385896 >1k 0.0010821846167011096 0.31614258127509903 >5k 0.0 0.0 >10k+ 2.164369233402219E-4 1.0636802302625659 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21227 1.048246913580247 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.876543209876543E-5 0.0 0.0 0.03590123456790124 0.0 2 9.876543209876543E-5 0.0 0.0 0.11871604938271604 0.0 3 9.876543209876543E-5 0.0 0.0 0.2386172839506173 0.0 4 9.876543209876543E-5 0.0 0.0 0.4143703703703704 0.0 5 9.876543209876543E-5 0.0 0.0 0.7522962962962964 0.0 6 9.876543209876543E-5 0.0 0.0 1.4408888888888889 0.0 7 9.876543209876543E-5 0.0 0.0 1.8019753086419754 0.0 8 9.876543209876543E-5 0.0 0.0 2.6166913580246915 0.0 9 9.876543209876543E-5 0.0 0.0 3.071901234567901 0.0 10 9.876543209876543E-5 0.0 0.0 3.6410864197530866 0.0 11 9.876543209876543E-5 0.0 0.0 4.122222222222222 0.0 12 9.876543209876543E-5 0.0 0.0 4.469679012345679 0.0 13 9.876543209876543E-5 0.0 0.0 4.656691358024691 0.0 14 9.876543209876543E-5 0.0 0.0 4.7803456790123455 0.0 15 9.876543209876543E-5 0.0 0.0 4.870074074074074 0.0 16 9.876543209876543E-5 0.0 0.0 5.026123456790123 0.0 17 9.876543209876543E-5 0.0 0.0 5.19516049382716 0.0 18 9.876543209876543E-5 0.0 0.0 5.407753086419753 0.0 19 9.876543209876543E-5 0.0 0.0 5.540592592592593 0.0 20 1.4814814814814815E-4 0.0 0.0 5.686024691358025 0.0 21 1.4814814814814815E-4 0.0 0.0 5.871604938271605 0.0 22 1.4814814814814815E-4 0.0 0.0 6.070913580246914 0.0 23 1.4814814814814815E-4 0.0 0.0 6.27446913580247 0.0 24 1.4814814814814815E-4 0.0 0.0 6.440740740740741 0.0 25 1.4814814814814815E-4 0.0 0.0 6.586716049382716 0.0 26 1.4814814814814815E-4 0.0 0.0 6.72879012345679 0.0 27 1.4814814814814815E-4 0.0 0.0 6.876987654320987 0.0 28 1.4814814814814815E-4 0.0 0.0 7.034172839506173 0.0 29 1.4814814814814815E-4 0.0 0.0 7.214172839506173 0.0 30 1.4814814814814815E-4 0.0 0.0 7.4595061728395065 0.0 31 1.4814814814814815E-4 0.0 0.0 7.656246913580247 0.0 32 1.4814814814814815E-4 0.0 0.0 7.843259259259259 0.0 33 1.4814814814814815E-4 0.0 0.0 8.026765432098765 0.0 34 1.4814814814814815E-4 0.0 0.0 8.218666666666667 0.0 35 1.4814814814814815E-4 0.0 0.0 8.434814814814814 0.0 36 1.4814814814814815E-4 0.0 0.0 8.621728395061728 0.0 37 1.4814814814814815E-4 0.0 0.0 8.821185185185184 0.0 38 1.4814814814814815E-4 0.0 0.0 9.050666666666666 0.0 39 1.4814814814814815E-4 0.0 0.0 9.41604938271605 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 11560 0.0 42.29455 1 GCGATCG 55 6.184564E-11 40.909092 9 GGGCGAT 2510 0.0 39.711155 7 CGGTCTA 210 0.0 39.642857 31 TAGGGAC 2070 0.0 39.239132 5 TACGGGA 690 0.0 39.130436 4 CGACGGT 220 0.0 38.863636 28 TACGCGG 140 0.0 38.571426 2 AGGGCGA 1370 0.0 38.430656 6 GGCGATA 540 0.0 38.333332 8 CGTTAGG 325 0.0 38.07692 2 TAGGGAT 3110 0.0 37.982315 5 CGTAAGG 250 0.0 37.8 2 CTAGGGA 1420 0.0 37.71127 4 AAGGGAT 2905 0.0 37.641994 5 ACGATAG 30 1.14022885E-4 37.500004 1 CGACTAA 30 1.14022885E-4 37.500004 41 ATACGAG 90 0.0 37.5 1 AGGGATC 1890 0.0 37.023808 6 TCGTCCC 930 0.0 37.016125 38 >>END_MODULE