##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547615_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2042728 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.33742818427123 31.0 31.0 33.0 30.0 34.0 2 31.73879831284439 31.0 31.0 34.0 30.0 34.0 3 31.780368213487062 31.0 31.0 34.0 30.0 34.0 4 35.62569368021587 37.0 35.0 37.0 33.0 37.0 5 35.57069810567046 37.0 35.0 37.0 33.0 37.0 6 35.62713586928852 37.0 35.0 37.0 33.0 37.0 7 35.9250580596144 37.0 35.0 37.0 35.0 37.0 8 35.95624723409088 37.0 35.0 37.0 35.0 37.0 9 37.81857398537642 39.0 38.0 39.0 35.0 39.0 10 37.16907880050599 39.0 37.0 39.0 33.0 39.0 11 36.928292459886976 39.0 37.0 39.0 33.0 39.0 12 36.454779588863516 38.0 35.0 39.0 32.0 39.0 13 36.281831452841494 39.0 35.0 39.0 32.0 39.0 14 37.3196475497472 39.0 35.0 41.0 32.0 41.0 15 37.51286808620629 39.0 35.0 41.0 32.0 41.0 16 37.574715772241824 39.0 35.0 41.0 33.0 41.0 17 37.47956605088881 39.0 35.0 41.0 32.0 41.0 18 37.36018843428983 39.0 36.0 41.0 32.0 41.0 19 37.25566595258889 39.0 35.0 41.0 32.0 41.0 20 37.05656553393305 39.0 35.0 41.0 32.0 41.0 21 36.89631561323877 38.0 35.0 41.0 32.0 41.0 22 36.85019591448299 38.0 35.0 41.0 32.0 41.0 23 36.7745147665279 38.0 35.0 40.0 31.0 41.0 24 36.69073317641899 38.0 35.0 40.0 31.0 41.0 25 36.5693650843382 38.0 35.0 40.0 31.0 41.0 26 36.48329146122244 38.0 35.0 40.0 31.0 41.0 27 36.38991877528481 38.0 35.0 40.0 31.0 41.0 28 36.40490265958072 38.0 35.0 40.0 31.0 41.0 29 36.38641708538778 38.0 35.0 40.0 31.0 41.0 30 36.356588836105445 38.0 35.0 40.0 31.0 41.0 31 36.23387352599073 38.0 35.0 40.0 30.0 41.0 32 36.0470165386679 38.0 35.0 40.0 30.0 41.0 33 35.82014688201268 38.0 35.0 40.0 29.0 41.0 34 35.61176818450621 38.0 35.0 40.0 28.0 41.0 35 35.3556836739889 38.0 34.0 40.0 27.0 41.0 36 35.21879956607047 38.0 34.0 40.0 25.0 41.0 37 35.15699789692999 38.0 34.0 40.0 25.0 41.0 38 35.05871413129893 38.0 34.0 40.0 25.0 41.0 39 34.9917306660505 38.0 34.0 40.0 24.0 41.0 40 34.910632742097825 38.0 34.0 40.0 24.0 41.0 41 34.80990812286315 38.0 34.0 40.0 23.0 41.0 42 34.776542447158896 38.0 34.0 40.0 23.0 41.0 43 34.7219414430115 38.0 34.0 40.0 23.0 41.0 44 34.58832845097341 37.0 34.0 40.0 23.0 41.0 45 34.50176724458665 37.0 34.0 40.0 23.0 41.0 46 34.46854255681618 37.0 34.0 40.0 23.0 41.0 47 34.408198742074326 37.0 33.0 40.0 23.0 41.0 48 34.28806282578983 37.0 33.0 40.0 23.0 41.0 49 34.21004607564003 36.0 33.0 40.0 23.0 41.0 50 34.13027725668812 36.0 33.0 40.0 23.0 41.0 51 33.69755004092566 36.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 1.0 11 4.0 12 6.0 13 13.0 14 10.0 15 38.0 16 115.0 17 317.0 18 760.0 19 1548.0 20 2705.0 21 4540.0 22 7649.0 23 11601.0 24 17655.0 25 26992.0 26 36232.0 27 40398.0 28 40963.0 29 43356.0 30 49646.0 31 58881.0 32 73489.0 33 95728.0 34 157146.0 35 231664.0 36 151497.0 37 191308.0 38 290998.0 39 507309.0 40 155.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.094826134463325 23.33130010456605 27.960991380154383 16.61288238081624 2 33.39989465068281 24.55481101742376 29.004351044289795 13.040943287603636 3 27.822500107699117 24.699813190987737 34.03566211458403 13.44202458672912 4 25.116706678520096 26.82603851320391 34.11247116600938 13.944783642266618 5 22.20041043154057 31.223931918493307 32.96841282833544 13.607244821630681 6 20.387442674697756 39.898116636184554 29.616228886077835 10.098211803039856 7 85.8602320034777 3.274885349395514 9.371634402622375 1.4932482445044077 8 86.82071230237213 2.500822429613732 8.93050861397112 1.7479566540430247 9 82.4255603291285 4.5283072440383645 10.561513818775676 2.4846186080574606 10 40.00806764287756 27.54634978323105 19.07052725570903 13.375055318182353 11 32.687416043643594 24.964850924841684 27.235442016754064 15.112291014760654 12 32.21353993287408 22.0278960292315 29.026478317230687 16.73208572066374 13 22.246280464163608 30.159375110146826 29.821053023212095 17.77329140247747 14 17.430171809462642 32.60458563254628 31.64107017674404 18.32417238124704 15 16.8657794870389 26.68382672582938 40.16995899600926 16.28043479112246 16 19.51953466149189 23.21111768184506 39.36471228670679 17.904635369956253 17 19.428333091826225 24.407214274245028 31.55163095625066 24.612821677678085 18 21.795902342357866 25.6746370539788 33.78849264317129 18.740967960492046 19 25.159639462522666 27.295068163749654 28.601066808698956 18.944225565028727 20 26.027106888435465 26.15756968132811 29.848124664664116 17.967198765572313 21 22.867165868387765 27.411530071551375 30.989784249297998 18.73151981076286 22 22.4614339256132 24.248553894595855 30.750643257447884 22.539368922343062 23 19.520073157072307 28.36966057154942 30.258752021806135 21.85151424957214 24 19.96643703909674 25.709737174993442 36.59973329782526 17.724092488084562 25 19.522765634974405 27.7129407341555 33.08570695657963 19.678586674290457 26 18.82139961854931 31.123282199098462 29.64442647283437 20.410891709517863 27 17.86982897380366 30.916401987929866 32.344100634054065 18.869668404212405 28 17.83477780693269 28.13282042445201 35.58344527514187 18.448956493473435 29 17.66990025103685 26.43176184004919 35.523819128146286 20.374518780767676 30 19.079828543007192 28.89072847682119 33.15610301518362 18.873339964987995 31 24.022630521537867 27.824703044164472 29.419677999224565 18.732988435073096 32 25.04836669395044 27.39625637872492 28.694569223117323 18.860807704207314 33 23.025434614887544 28.642530968391288 27.92221969836415 20.40981471835702 34 19.79499962794851 27.84996338230053 30.287781829005134 22.067255160745827 35 19.8171269008894 28.343519058827216 30.878511480725773 20.96084255955761 36 24.653306754496928 28.12723965207311 28.061347374687184 19.15810621874278 37 19.905293313647242 31.071782439952848 29.736851896091892 19.28607235030802 38 19.973192710923822 31.086517637198885 28.312726902455932 20.62756274942136 39 19.613820342209046 30.865538632652022 28.447742430710303 21.072898594428626 40 22.862759995457054 28.024386996212908 28.488619140678544 20.624233867651494 41 18.721043624016513 26.63643911475243 30.628062081686842 24.014455179544218 42 20.85456311364019 27.695023517570622 27.67862387943965 23.771789489349537 43 21.03319678390858 28.013568130460836 28.274591624533468 22.67864346109712 44 19.900789532429183 30.01026078851418 28.65839211094184 21.430557568114793 45 18.9046706169397 32.49316600154303 27.09807668960331 21.50408669191395 46 20.935141634128478 31.306566513015927 27.566078303131892 20.192213549723704 47 20.05396704798681 28.862530890064658 29.479353100363824 21.604148961584706 48 20.890103821947907 27.49024833458003 30.58204518663278 21.037602656839287 49 19.972458398768705 27.708241136362748 30.5052850893511 21.814015375517446 50 19.275351392843294 29.909219435969938 30.357982071034424 20.457447100152347 51 18.273945429836964 31.212574557160817 28.529544804790458 21.983935208211765 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1526.0 1 2260.5 2 2995.0 3 17952.0 4 32909.0 5 23375.5 6 13842.0 7 13813.5 8 13785.0 9 14415.5 10 15046.0 11 15566.0 12 16086.0 13 15713.5 14 15341.0 15 14786.0 16 14231.0 17 13554.0 18 12877.0 19 12659.0 20 12441.0 21 12684.0 22 12927.0 23 12976.0 24 13025.0 25 15136.0 26 20186.0 27 23125.0 28 26523.0 29 29921.0 30 36400.5 31 42880.0 32 49642.0 33 56404.0 34 61947.5 35 67491.0 36 73906.5 37 80322.0 38 86547.5 39 92773.0 40 110672.0 41 128571.0 42 143901.0 43 159231.0 44 164505.0 45 169779.0 46 169636.5 47 169494.0 48 166926.0 49 164358.0 50 155158.5 51 145959.0 52 132983.0 53 120007.0 54 105723.0 55 91439.0 56 82635.0 57 73831.0 58 68455.0 59 63079.0 60 56931.0 61 50783.0 62 43952.0 63 37121.0 64 31798.0 65 26475.0 66 23170.0 67 19865.0 68 16754.0 69 13643.0 70 11453.0 71 9263.0 72 7264.5 73 5266.0 74 4427.5 75 2876.5 76 2164.0 77 1569.0 78 974.0 79 650.0 80 326.0 81 227.0 82 128.0 83 126.5 84 125.0 85 80.0 86 35.0 87 25.5 88 16.0 89 12.5 90 9.0 91 5.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2042728.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.86229243451243 #Duplication Level Percentage of deduplicated Percentage of total 1 77.73080096861054 16.993735019446454 2 7.3802483203397715 3.226982940371745 3 2.7320244763501704 1.7918495412063935 4 1.5906714223690495 1.3910289521221597 5 1.0609048983621947 1.1596906566600496 6 0.7194003373984073 0.9436644332214534 7 0.601196330702383 0.9200470994659938 8 0.4782534524011367 0.8364573467367057 9 0.3654244400510554 0.7190114374002716 >10 5.118858951366343 27.724843621035177 >50 1.6082995170697338 24.570042899630096 >100 0.6096015243507733 17.986623104823217 >500 0.003633987897616479 0.5228129288436274 >1k 4.5424848720205987E-4 0.1789550570379365 >5k 0.0 0.0 >10k+ 2.2712424360102993E-4 1.0342549619986623 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20829 1.019665858596935 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2549 0.12478411222639528 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02888294476797694 0.0 2 0.0 0.0 0.0 0.08013793319521738 0.0 3 0.0 0.0 0.0 0.14896745920161666 0.0 4 0.0 0.0 0.0 0.26611472501478417 0.0 5 0.0 0.0 0.0 0.46134384998883843 0.0 6 0.0 0.0 0.0 0.8943432507901199 0.0 7 0.0 0.0 0.0 1.1101820702511542 0.0 8 0.0 0.0 0.0 1.6145076583862366 0.0 9 0.0 0.0 0.0 1.8642716994137252 0.0 10 0.0 0.0 0.0 2.21282520237643 0.0 11 0.0 0.0 0.0 2.5248099600142555 0.0 12 0.0 0.0 0.0 2.764440493301115 0.0 13 0.0 0.0 0.0 2.9031765364747533 0.0 14 0.0 0.0 0.0 2.9740131823718086 0.0 15 0.0 0.0 0.0 3.048766159762827 0.0 16 0.0 0.0 0.0 3.1730607305524767 0.0 17 0.0 0.0 0.0 3.3212938775989755 0.0 18 0.0 0.0 0.0 3.50487191637849 0.0 19 0.0 0.0 0.0 3.6223129070537046 0.0 20 0.0 0.0 0.0 3.739900760159943 0.0 21 0.0 0.0 0.0 3.9031628293145246 0.0 22 0.0 0.0 0.0 4.079985196266953 0.0 23 0.0 0.0 0.0 4.287697627878014 0.0 24 0.0 0.0 0.0 4.441658409734433 0.0 25 0.0 0.0 0.0 4.581569352356261 0.0 26 0.0 0.0 0.0 4.707283593312472 0.0 27 0.0 0.0 0.0 4.8429844795782895 0.0 28 0.0 0.0 0.0 4.98832933214799 0.0 29 0.0 0.0 0.0 5.150954997434803 0.0 30 0.0 0.0 0.0 5.346771572132951 0.0 31 0.0 0.0 0.0 5.526629095993202 0.0 32 0.0 0.0 0.0 5.693464817636024 0.0 33 0.0 0.0 0.0 5.873028616634226 0.0 34 0.0 0.0 0.0 6.055333847678203 0.0 35 0.0 0.0 0.0 6.2676479687946705 0.0 36 0.0 0.0 0.0 6.452205090447676 0.0 37 0.0 0.0 0.0 6.656245961283147 0.0 38 0.0 0.0 0.0 6.868364265824916 0.0 39 0.0 0.0 0.0 7.175013021802218 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCCGAC 20 7.0345774E-4 45.0 25 CGTTTTT 12395 0.0 42.89431 1 CGTAAGG 410 0.0 42.80488 2 ACGTAAG 160 0.0 40.78125 1 ATCGACT 50 1.0822987E-9 40.5 25 TAATGCG 125 0.0 39.600002 1 GGGCGAT 3045 0.0 39.01478 7 TCGATAG 150 0.0 39.0 1 ATAGGGA 2365 0.0 38.72093 4 ATATCGG 65 9.094947E-12 38.076927 2 GGATGCC 1830 0.0 37.745903 8 AAGGGCG 740 0.0 37.7027 5 GCGTAAG 185 0.0 37.7027 1 TATGGGC 1000 0.0 37.575 4 CGCAACT 30 1.14023234E-4 37.500004 18 TAGGGAG 1785 0.0 37.436974 5 GGCACCG 980 0.0 37.42347 8 CGGGTAT 385 0.0 37.4026 6 TACGGGA 700 0.0 37.285713 4 ACGGGAC 480 0.0 37.031254 5 >>END_MODULE