##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547614_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1873048 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.337164877782097 31.0 31.0 33.0 30.0 34.0 2 31.730626230614487 31.0 31.0 34.0 30.0 34.0 3 31.80188174568938 31.0 31.0 34.0 30.0 34.0 4 35.58411209963653 37.0 35.0 37.0 33.0 37.0 5 35.49736739261353 37.0 35.0 37.0 33.0 37.0 6 35.54705752335231 37.0 35.0 37.0 33.0 37.0 7 35.903878597878965 37.0 35.0 37.0 35.0 37.0 8 35.94309649298897 37.0 35.0 37.0 35.0 37.0 9 37.794316002579755 39.0 38.0 39.0 35.0 39.0 10 37.241141177375056 39.0 37.0 39.0 34.0 39.0 11 36.816800744027915 39.0 35.0 39.0 33.0 39.0 12 35.51523773015961 35.0 35.0 39.0 31.0 39.0 13 34.93164670633107 35.0 34.0 39.0 30.0 39.0 14 35.785345063233834 37.0 35.0 40.0 30.0 41.0 15 36.25638851753933 37.0 35.0 40.0 31.0 41.0 16 36.50507835357129 37.0 35.0 40.0 32.0 41.0 17 36.449633965600455 36.0 35.0 40.0 32.0 41.0 18 36.36833599566055 36.0 35.0 40.0 32.0 41.0 19 36.24964442982775 36.0 35.0 40.0 31.0 41.0 20 35.992738039815315 36.0 35.0 40.0 31.0 41.0 21 35.72971755128539 35.0 34.0 40.0 31.0 41.0 22 35.63274032486087 35.0 34.0 40.0 30.0 41.0 23 35.688453259072915 35.0 34.0 40.0 31.0 41.0 24 35.54334645988784 35.0 34.0 40.0 31.0 41.0 25 35.462267384498425 35.0 34.0 40.0 31.0 41.0 26 35.28727667416959 35.0 34.0 40.0 30.0 41.0 27 35.23718879601591 35.0 34.0 40.0 30.0 41.0 28 35.28636906261879 35.0 34.0 40.0 30.0 41.0 29 35.36457741606195 36.0 34.0 40.0 30.0 41.0 30 35.356327760954336 36.0 34.0 40.0 30.0 41.0 31 35.13873162887443 35.0 34.0 40.0 30.0 41.0 32 34.869551127360324 35.0 34.0 40.0 29.0 41.0 33 34.68714095954829 35.0 34.0 40.0 27.0 41.0 34 34.59981965224596 35.0 34.0 40.0 27.0 41.0 35 34.411279369242 35.0 34.0 40.0 26.0 41.0 36 34.200018365786676 35.0 33.0 40.0 24.0 41.0 37 34.11553681486006 35.0 33.0 40.0 24.0 41.0 38 34.09012048810281 35.0 33.0 40.0 24.0 41.0 39 34.101835083777885 35.0 33.0 40.0 24.0 41.0 40 33.94888331745903 35.0 33.0 40.0 23.0 41.0 41 33.93652111424801 35.0 34.0 40.0 23.0 41.0 42 33.868943561510434 35.0 33.0 40.0 23.0 41.0 43 33.75022423344196 35.0 33.0 40.0 23.0 41.0 44 33.618000179386755 35.0 33.0 39.0 23.0 41.0 45 33.508582268046524 35.0 33.0 39.0 23.0 41.0 46 33.49023943860488 35.0 33.0 39.0 23.0 41.0 47 33.454187506139725 35.0 33.0 39.0 23.0 41.0 48 33.34855486885547 35.0 33.0 39.0 23.0 41.0 49 33.378236969901465 35.0 33.0 39.0 23.0 41.0 50 33.219069132237934 35.0 33.0 39.0 22.0 41.0 51 32.78338782561899 35.0 32.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 8.0 13 5.0 14 13.0 15 42.0 16 149.0 17 395.0 18 1010.0 19 1981.0 20 3610.0 21 5754.0 22 8979.0 23 13381.0 24 19458.0 25 27712.0 26 35940.0 27 41274.0 28 43361.0 29 47428.0 30 54649.0 31 65178.0 32 80919.0 33 107668.0 34 208249.0 35 379395.0 36 102748.0 37 115749.0 38 175783.0 39 332044.0 40 162.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.02048212325578 23.739861445088433 28.863008315857364 15.37664811579842 2 30.76680362702931 25.864046196360157 29.580982441453717 13.788167735156815 3 28.09490199930808 24.863324378232697 32.873797147750615 14.167976474708604 4 24.924988574772243 27.829772648645417 32.23110139195578 15.014137384626554 5 23.11659925426364 31.05227415421281 31.778470172681107 14.052656418842444 6 21.110350615680964 40.37408544789029 28.05395270169264 10.46161123473611 7 85.00631056972378 4.736717905787786 8.655837971050396 1.6011335534380327 8 86.19501475669604 3.604552579538805 7.682184332702632 2.5182483310625248 9 82.72286668574431 5.140017767830829 9.920781528289718 2.2163340181351465 10 57.32730821634042 18.765349312991443 14.198141211543966 9.709201259124166 11 52.84157159880579 18.171451025280717 19.68758942643221 9.299387949481273 12 48.61322293929467 20.075566669941185 19.98987746176286 11.321332929001287 13 18.90437404700787 48.3919258876441 21.507777697101197 11.195922368246835 14 11.777861539052923 49.582872409035964 26.98756251841918 11.651703533491933 15 10.61398319744075 22.765727306507895 55.66419013287434 10.956099363177024 16 11.280437020300601 17.058185374854247 55.81159692650696 15.849780678338195 17 11.689983385369729 19.059629011109166 28.68063178306162 40.569755820459484 18 20.23941724931769 23.443499579295352 38.04408643024632 18.27299674114064 19 30.094477023546645 26.359121602863354 25.616321631906924 17.930079741683073 20 33.2778444546002 22.834065117391546 25.38103668459111 18.507053743417146 21 19.11232386997023 30.697024315447337 29.792455932789764 20.39819588179267 22 19.769434632748332 24.324256505973153 27.72128637386762 28.185022487410894 23 16.93672559379151 32.088125878247645 24.462427017353534 26.512721510607314 24 18.175722138460948 23.500091828933375 43.39467007786239 14.929515954743286 25 14.98482687042724 24.671604785355207 38.9133113513375 21.430256992880054 26 13.074945222973463 39.92834139861872 28.598893354575 18.39782002383281 27 15.314236474452336 39.68793111548663 29.97638074411334 15.021451665947696 28 12.036477442115737 30.01738343064353 43.61772896369981 14.328410163540925 29 12.295306900837566 23.847973997462958 43.4874066227881 20.36931247891138 30 15.399925682630663 33.51377006889306 34.60957754419534 16.476726704280935 31 30.569691753761784 27.862019553156138 24.147645975970715 17.420642717111363 32 31.40319949088331 28.266600749153252 26.03195433325788 14.298245426705563 33 27.88001161742785 29.82272744745463 22.97602624171938 19.32123469339814 34 16.366638762060557 32.22410744412316 27.198715676266705 24.210538117549575 35 16.545598404312116 27.620915214132257 32.73925708257343 23.094229298982192 36 30.71848665917798 24.57545134988532 28.673798001973257 16.032263988963443 37 16.24597981471911 34.864883334543485 32.40595008777137 16.48318676296603 38 17.185411158710295 35.3397777312701 24.88185033165194 22.592960778367665 39 16.98370783877402 33.78487897800804 30.369857045841858 18.861556137376084 40 23.602491767429346 27.070315336286093 26.687890539911418 22.639302356373143 41 14.25008862559849 23.817328760394822 30.92681020454361 31.005772409463077 42 22.827498280876945 23.623687166586226 25.64531181261772 27.903502739919105 43 22.75382157851801 24.71549047328205 26.51870106905963 26.01198687914031 44 17.336128065057597 33.156758395940734 28.925580123947704 20.581533415053965 45 14.688144671145642 42.77658661176862 21.849626918263706 20.685641798822026 46 21.941455851638615 35.76742293844045 24.6761428431092 17.614978366811744 47 20.407912664277692 29.242656888664893 26.00579376502898 24.34363668202844 48 22.799041989313675 24.16638548504897 33.493215336713206 19.54135718892415 49 19.714764384041413 23.059046004160063 33.99459063515724 23.231598976641283 50 17.32384861466444 35.159216421575955 28.68041822740261 18.836516736356998 51 15.952607728152188 37.39760006150403 23.18237439723915 23.46741781310463 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1777.0 1 2373.0 2 2969.0 3 11246.5 4 19524.0 5 14239.0 6 8954.0 7 9719.5 8 10485.0 9 11622.5 10 12760.0 11 13187.0 12 13614.0 13 13427.5 14 13241.0 15 12725.5 16 12210.0 17 11458.5 18 10707.0 19 10314.5 20 9922.0 21 9210.0 22 8498.0 23 8767.5 24 9037.0 25 9798.5 26 12678.0 27 14796.0 28 18760.0 29 22724.0 30 26490.0 31 30256.0 32 32363.0 33 34470.0 34 36405.5 35 38341.0 36 44855.0 37 51369.0 38 63667.0 39 75965.0 40 117734.0 41 159503.0 42 199005.0 43 238507.0 44 237998.0 45 237489.0 46 225481.0 47 213473.0 48 189568.5 49 165664.0 50 151604.5 51 137545.0 52 116818.0 53 96091.0 54 79643.0 55 63195.0 56 55625.0 57 48055.0 58 40807.0 59 33559.0 60 29834.5 61 26110.0 62 21851.0 63 17592.0 64 13389.5 65 9187.0 66 7364.5 67 5542.0 68 4456.5 69 3371.0 70 2868.5 71 2366.0 72 1945.0 73 1524.0 74 1247.0 75 751.5 76 533.0 77 451.0 78 369.0 79 225.5 80 82.0 81 67.0 82 52.0 83 46.0 84 40.0 85 32.5 86 25.0 87 21.5 88 18.0 89 12.0 90 6.0 91 3.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1873048.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.64388577184247 #Duplication Level Percentage of deduplicated Percentage of total 1 80.70959888183928 13.433213444805578 2 8.495200176959475 2.8278628270849886 3 2.980134744188117 1.4880306680089799 4 1.4076196566368269 0.9371304310105386 5 0.762944163058248 0.6349177750117717 6 0.5338173035547852 0.5330876534039282 7 0.3800800172111478 0.44282058734355845 8 0.2509254355275091 0.3341099428935747 9 0.1937938308890071 0.2902934146143952 >10 1.6964559889243427 6.48870224287152 >50 0.8122235805124894 10.049659074465247 >100 1.750229608350966 58.150022259550305 >500 0.02372641808906582 2.423711000123616 >1k 0.002600155407020911 0.7005955084947985 >5k 0.0 0.0 >10k+ 6.500388517552278E-4 1.2658431703172175 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13311 0.7106598442752134 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 10089 0.5386407609415241 No Hit GAGCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTCT 2117 0.11302433253178776 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2021 0.10789899671551396 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04943813506114098 0.0 2 0.0 0.0 0.0 0.18034775403513417 0.0 3 0.0 0.0 0.0 0.2758071336132336 0.0 4 0.0 0.0 0.0 0.6667741563483691 0.0 5 0.0 0.0 0.0 1.0461557845821357 0.0 6 0.0 0.0 0.0 1.7945615915876154 0.0 7 0.0 0.0 0.0 2.0564876073651077 0.0 8 0.0 0.0 0.0 2.832121760894542 0.0 9 0.0 0.0 0.0 3.072478655111882 0.0 10 0.0 0.0 0.0 3.4893393015021505 0.0 11 0.0 0.0 0.0 3.9197073433248906 0.0 12 0.0 0.0 0.0 4.263959065651281 0.0 13 0.0 0.0 0.0 4.42716897805075 0.0 14 0.0 0.0 0.0 4.486804395829685 0.0 15 0.0 0.0 0.0 4.567848768424515 0.0 16 0.0 0.0 0.0 4.763679307737975 0.0 17 0.0 0.0 0.0 4.949526119992654 0.0 18 0.0 0.0 0.0 5.238733871208853 0.0 19 0.0 0.0 0.0 5.357951317851971 0.0 20 0.0 0.0 0.0 5.485871157599806 0.0 21 0.0 0.0 0.0 5.673479804041327 0.0 22 5.3388914752852036E-5 0.0 0.0 5.845498887375016 0.0 23 5.3388914752852036E-5 0.0 0.0 6.047949652117832 0.0 24 5.3388914752852036E-5 0.0 0.0 6.189803998616159 0.0 25 5.3388914752852036E-5 0.0 0.0 6.300319052154563 0.0 26 5.3388914752852036E-5 0.0 0.0 6.416172997168252 0.0 27 5.3388914752852036E-5 0.0 0.0 6.513607766592207 0.0 28 5.3388914752852036E-5 0.0 0.0 6.627646488504299 0.0 29 5.3388914752852036E-5 0.0 0.0 6.747504602124452 0.0 30 5.3388914752852036E-5 0.0 0.0 6.915359350107418 0.0 31 5.3388914752852036E-5 0.0 0.0 7.0940520477852145 0.0 32 5.3388914752852036E-5 0.0 0.0 7.234358115755709 0.0 33 5.3388914752852036E-5 0.0 0.0 7.366228735195254 0.0 34 5.3388914752852036E-5 0.0 0.0 7.518440531155635 0.0 35 5.3388914752852036E-5 0.0 0.0 7.723293797062328 0.0 36 5.3388914752852036E-5 0.0 0.0 7.891201933960048 0.0 37 5.3388914752852036E-5 0.0 0.0 8.060444793726589 0.0 38 5.3388914752852036E-5 0.0 0.0 8.205555864024841 0.0 39 5.3388914752852036E-5 0.0 0.0 8.362305717739215 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATTGCG 45 3.8562575E-10 45.000004 1 TAGCGCA 45 3.8562575E-10 45.000004 1 GTGTCAA 45 3.8562575E-10 45.000004 37 GTATCAC 45 3.8562575E-10 45.000004 36 CCGAAAC 45 3.8562575E-10 45.000004 23 TAGTGTC 45 3.8562575E-10 45.000004 27 CGCCCAT 45 3.8562575E-10 45.000004 41 ATCTCGC 50 2.1827873E-11 45.0 38 GTCGCGA 35 1.2124838E-7 45.0 44 GGTACGT 40 6.8193913E-9 45.0 25 GGTACGC 20 7.0344255E-4 45.0 21 GGTACAT 80 0.0 45.0 8 GTCGAGT 25 3.8917504E-5 45.0 13 CGAAACG 35 1.2124838E-7 45.0 31 CAACGCC 20 7.0344255E-4 45.0 31 CAACGAC 35 1.2124838E-7 45.0 15 ACACCGT 35 1.2124838E-7 45.0 27 TTGCTAG 100 0.0 45.0 1 GACGTAT 35 1.2124838E-7 45.0 9 CGGTTCA 20 7.0344255E-4 45.0 37 >>END_MODULE