SRR1547610_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547610_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1645104
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11915	0.7242703196879954	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	5729	0.3482454604693685	No Hit
GAGCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCT	2405	0.14619136540911698	No Hit
AAGCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCT	2013	0.12236308464388879	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTGGTA	20	7.0341735E-4	45.000004	12
AACCGGT	20	7.0341735E-4	45.000004	30
CAAACGA	20	7.0341735E-4	45.000004	29
TCACCGT	20	7.0341735E-4	45.000004	45
CACGAAC	20	7.0341735E-4	45.000004	27
TGCGGAT	40	6.8175723E-9	45.000004	38
TAGCACG	40	6.8175723E-9	45.000004	1
CTAACGT	20	7.0341735E-4	45.000004	14
TACGCGG	150	0.0	45.000004	2
CGGATTA	20	7.0341735E-4	45.000004	20
GTATGCG	115	0.0	45.000004	1
GTGTCGA	20	7.0341735E-4	45.000004	39
GTCAACG	20	7.0341735E-4	45.000004	1
CGCAGAT	20	7.0341735E-4	45.000004	28
ACGCTAC	20	7.0341735E-4	45.000004	25
CGTACCG	20	7.0341735E-4	45.000004	27
ACCCGGT	20	7.0341735E-4	45.000004	34
TTCGCAC	20	7.0341735E-4	45.000004	44
GCTCGAT	20	7.0341735E-4	45.000004	9
ATACCCG	20	7.0341735E-4	45.000004	28