##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547610_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1645104 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26972154951906 31.0 31.0 33.0 30.0 34.0 2 31.65045188632451 31.0 31.0 34.0 30.0 34.0 3 31.714861188107257 31.0 31.0 34.0 30.0 34.0 4 35.4986183244342 37.0 35.0 37.0 33.0 37.0 5 35.40735175405324 37.0 35.0 37.0 33.0 37.0 6 35.46717289606006 37.0 35.0 37.0 33.0 37.0 7 35.87900096285706 37.0 35.0 37.0 35.0 37.0 8 35.924556745348625 37.0 35.0 37.0 35.0 37.0 9 37.75347272877581 39.0 37.0 39.0 35.0 39.0 10 37.15201956836771 39.0 37.0 39.0 33.0 39.0 11 36.737422679660376 39.0 35.0 39.0 32.0 39.0 12 35.43418896312938 35.0 35.0 39.0 31.0 39.0 13 34.88262018693043 35.0 34.0 39.0 30.0 39.0 14 35.71857949406238 36.0 35.0 40.0 30.0 41.0 15 36.15069199272508 37.0 35.0 40.0 31.0 41.0 16 36.4022614983612 36.0 35.0 40.0 32.0 41.0 17 36.326169044631825 36.0 35.0 40.0 32.0 41.0 18 36.27330065454829 36.0 35.0 40.0 31.0 41.0 19 36.16396653342281 36.0 35.0 40.0 31.0 41.0 20 35.926440516830546 36.0 35.0 40.0 31.0 41.0 21 35.6780835740476 35.0 34.0 40.0 31.0 41.0 22 35.59987696826462 35.0 34.0 40.0 30.0 41.0 23 35.622343025121815 35.0 34.0 40.0 31.0 41.0 24 35.497625074159444 35.0 34.0 40.0 30.0 41.0 25 35.37751047958062 35.0 34.0 40.0 30.0 41.0 26 35.22010766492574 35.0 34.0 40.0 30.0 41.0 27 35.15617857594413 35.0 34.0 40.0 30.0 41.0 28 35.251466776568535 35.0 34.0 40.0 30.0 41.0 29 35.30937193028526 36.0 34.0 40.0 30.0 41.0 30 35.32675988873652 36.0 34.0 40.0 30.0 41.0 31 35.07171157568154 35.0 34.0 40.0 29.0 41.0 32 34.82329323860376 35.0 34.0 40.0 29.0 41.0 33 34.59626686215583 35.0 34.0 40.0 27.0 41.0 34 34.50388486077476 35.0 34.0 40.0 27.0 41.0 35 34.28036829282526 35.0 34.0 40.0 25.0 41.0 36 34.12477448234276 35.0 33.0 40.0 24.0 41.0 37 34.012998570303154 35.0 33.0 40.0 24.0 41.0 38 33.994658696349894 35.0 33.0 40.0 24.0 41.0 39 33.98831563232476 35.0 33.0 40.0 23.0 41.0 40 33.828116641865805 35.0 33.0 39.0 23.0 41.0 41 33.85630574115679 35.0 33.0 39.0 23.0 41.0 42 33.83156627179802 35.0 33.0 39.0 23.0 41.0 43 33.760377459418976 35.0 33.0 39.0 23.0 41.0 44 33.62093095634076 35.0 33.0 39.0 23.0 41.0 45 33.483235710325914 35.0 33.0 39.0 23.0 41.0 46 33.465458110854996 35.0 33.0 39.0 23.0 41.0 47 33.41665572510917 35.0 33.0 39.0 23.0 41.0 48 33.330943818749454 35.0 33.0 39.0 23.0 41.0 49 33.35033529795077 35.0 33.0 39.0 23.0 41.0 50 33.181564205059374 35.0 33.0 38.0 23.0 41.0 51 32.725592424551884 35.0 32.0 38.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 1.0 13 6.0 14 11.0 15 42.0 16 134.0 17 314.0 18 852.0 19 1740.0 20 3018.0 21 5121.0 22 7585.0 23 11409.0 24 16860.0 25 23780.0 26 31426.0 27 36029.0 28 38755.0 29 42689.0 30 49747.0 31 59083.0 32 74155.0 33 98717.0 34 185276.0 35 328305.0 36 98512.0 37 110484.0 38 160018.0 39 260922.0 40 110.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.54505490230405 23.795273733453932 28.99859218626907 14.661079177972944 2 30.74316274229471 26.354078526342406 29.46190635971951 13.440852371643372 3 27.788516713836938 25.52264172964141 32.41922699112032 14.269614565401337 4 24.390919966154115 29.010263180929595 31.558187202754358 15.040629650161936 5 22.073437302444102 32.85044592925432 31.380569252764566 13.695547515537013 6 20.822148630117002 39.89765996557056 28.492180433577452 10.78801097073498 7 86.53975675701962 3.9225483616841244 7.976213054007528 1.5614818272887308 8 87.12148289712991 2.752409574105953 7.346404847353116 2.7797026814110235 9 82.7692960445054 4.6417734076386665 9.834454235112187 2.7544763127437535 10 57.399653760491745 20.519979283984476 12.801804627549382 9.278562327974402 11 51.4116432760482 17.407410109026543 20.09775673756796 11.083189877357299 12 47.836063859792446 18.441630437954075 21.795460955659944 11.92684474659353 13 19.538278431029283 46.55000534920589 22.73303086005505 11.17868535970978 14 13.097105107032746 48.27737334539336 26.020664954920786 12.604856592653107 15 10.562554099923165 22.96876063762534 54.16496464661201 12.303720615839485 16 12.201356266837841 17.687757126601113 54.19614808547058 15.91473852109046 17 12.987385599937754 19.002749978116885 27.5389884165378 40.47087600540756 18 19.408864120444665 22.81959073712057 38.66102082299964 19.110524319435125 19 29.17809451560509 24.94936490337389 26.462643091257455 19.409897489763566 20 32.37138807029829 21.907368774253786 26.592665266147307 19.128577889300615 21 18.96372508972077 30.639947383265735 30.604448107839993 19.7918794191735 22 21.445513475135918 22.94991684416304 26.541483091646484 29.063086589054553 23 16.47379132261547 32.00150264056254 23.9591539501454 27.565552086676586 24 18.464242990108833 22.883720421322906 42.83966241647945 15.812374172088816 25 14.836995107908072 24.21105291823496 38.96550005349206 21.986451920364914 26 13.762351802682385 38.02549869187602 28.1370053200284 20.0751441854132 27 15.189434832083565 38.87656950563611 29.13511850922495 16.79887715305537 28 12.432830994271486 29.993605267508922 41.95455120162616 15.619012536593432 29 12.652391581322517 23.291536583705348 41.43817047432867 22.61790136064346 30 16.87717007556969 33.29515945496455 32.24872105350178 17.578949415963976 31 31.276320524416697 27.403677822192396 24.55753557221914 16.762466081171766 32 31.573991674690475 26.705363308337954 26.24028632840234 15.480358688569234 33 30.069223587080206 29.25353047588481 22.790899541913458 17.886346395121524 34 19.1032299477723 28.853130258026237 26.63296666958442 25.410673124617045 35 17.31671675468542 28.04916892792188 32.42141530261917 22.212699014773534 36 34.03973244244741 22.98657106176874 26.77222838191385 16.201468113870003 37 18.494757778231648 34.044109065445106 31.40913887511063 16.051994281212618 38 18.95928768029255 34.818892908898164 24.38909637323841 21.83272303757088 39 18.90135821200362 33.759810929886505 28.784380805104114 18.554450053005766 40 24.810224763905502 26.01124305818963 26.67715840457503 22.50137377332983 41 15.332830021688599 23.337369552320098 29.99281504391212 31.336985382079185 42 22.414753109833786 24.081577821219813 25.454560927455045 28.04910814149136 43 22.954597399313357 24.379674476507258 26.680197726101206 25.985530398078176 44 18.073629387564555 31.263190655423607 29.314012974255732 21.349166982756103 45 16.421028700921035 41.28511024227039 21.43907011350042 20.854790943308142 46 23.436998511948183 34.047573891984946 25.23615528258396 17.279272313482917 47 20.996301753566947 28.292679368599188 26.365931880294497 24.345086997539365 48 23.447149845845612 23.78317723377975 33.0391270095994 19.730545910775245 49 21.790111749773875 22.03137309252181 33.985085441406746 22.193429716297572 50 18.737174063159536 34.26324414748247 28.278941635300868 18.72064015405713 51 17.454458806251765 35.47107052198524 23.667439870062925 23.407030801700074 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 885.0 1 1470.5 2 2056.0 3 9526.0 4 16996.0 5 12018.0 6 7040.0 7 7606.5 8 8173.0 9 9535.0 10 10897.0 11 11420.0 12 11943.0 13 11657.5 14 11372.0 15 10856.0 16 10340.0 17 9699.0 18 9058.0 19 8381.0 20 7704.0 21 7861.0 22 8018.0 23 7721.5 24 7425.0 25 7747.0 26 9335.5 27 10602.0 28 11603.5 29 12605.0 30 15066.5 31 17528.0 32 20779.0 33 24030.0 34 29431.5 35 34833.0 36 35908.5 37 36984.0 38 50198.0 39 63412.0 40 92550.5 41 121689.0 42 158759.0 43 195829.0 44 200484.0 45 205139.0 46 194903.5 47 184668.0 48 175715.5 49 166763.0 50 150810.0 51 134857.0 52 114575.5 53 94294.0 54 80400.5 55 66507.0 56 55265.0 57 44023.0 58 39685.5 59 35348.0 60 29869.0 61 24390.0 62 21013.5 63 17637.0 64 14759.0 65 11881.0 66 10318.5 67 8756.0 68 6845.5 69 4935.0 70 4071.0 71 3207.0 72 2668.0 73 2129.0 74 1815.5 75 1049.0 76 596.0 77 533.5 78 471.0 79 368.0 80 265.0 81 176.5 82 88.0 83 105.5 84 123.0 85 75.0 86 27.0 87 15.5 88 4.0 89 3.5 90 3.0 91 2.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1645104.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.850552601476025 #Duplication Level Percentage of deduplicated Percentage of total 1 78.9101500086174 14.874999335278064 2 9.271150017963127 3.495326021795787 3 3.292431967884006 1.8619248599213605 4 1.5723608662999113 1.1855948487475558 5 0.9314871355563171 0.8779523623201293 6 0.5739759987740902 0.6491858854125436 7 0.42422349676537047 0.5597793138390398 8 0.2945957759360336 0.4442634536363877 9 0.21701308370188965 0.3681734894577892 >10 2.0880151134931983 9.089475238471652 >50 0.9488688115166782 13.105872256237044 >100 1.4590694424166593 50.10591219429711 >500 0.01371858441493138 1.621378592895847 >1k 0.002286430735821897 0.6737836912641648 >5k 3.266329622602709E-4 0.3527466661109751 >10k+ 3.266329622602709E-4 0.7336317903145869 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11915 0.7242703196879954 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5729 0.3482454604693685 No Hit GAGCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCT 2405 0.14619136540911698 No Hit AAGCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCT 2013 0.12236308464388879 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.078643052354137E-5 0.0 0.0 0.08570886703819333 0.0 2 6.078643052354137E-5 0.0 0.0 0.3291585212849765 0.0 3 6.078643052354137E-5 0.0 0.0 0.4992997403203688 0.0 4 6.078643052354137E-5 0.0 0.0 1.038171446911563 0.0 5 6.078643052354137E-5 0.0 0.0 1.6758818895340355 0.0 6 6.078643052354137E-5 0.0 0.0 2.529870451959268 0.0 7 6.078643052354137E-5 0.0 0.0 2.8941635300868516 0.0 8 6.078643052354137E-5 0.0 0.0 3.9063791711648626 0.0 9 6.078643052354137E-5 0.0 0.0 4.200159989885138 0.0 10 1.2157286104708274E-4 0.0 0.0 4.743955397348739 0.0 11 1.2157286104708274E-4 0.0 0.0 5.465247181941081 0.0 12 1.2157286104708274E-4 0.0 0.0 6.002963946352327 0.0 13 1.2157286104708274E-4 0.0 0.0 6.213467355255352 0.0 14 1.2157286104708274E-4 0.0 0.0 6.285803207578366 0.0 15 1.2157286104708274E-4 0.0 0.0 6.41169190519262 0.0 16 1.2157286104708274E-4 0.0 0.0 6.716231922115562 0.0 17 1.2157286104708274E-4 0.0 0.0 7.040649101819702 0.0 18 1.2157286104708274E-4 0.0 0.0 7.481533082406948 0.0 19 1.2157286104708274E-4 0.0 0.0 7.681459652398876 0.0 20 1.2157286104708274E-4 0.0 0.0 7.8959141792859295 0.0 21 1.2157286104708274E-4 0.0 0.0 8.198448244001595 0.0 22 1.2157286104708274E-4 0.0 0.0 8.495268384248048 0.0 23 1.2157286104708274E-4 0.0 0.0 8.835976327332498 0.0 24 1.2157286104708274E-4 0.0 0.0 9.08526147890954 0.0 25 1.2157286104708274E-4 0.0 0.0 9.269322790534824 0.0 26 1.2157286104708274E-4 0.0 0.0 9.474355420690728 0.0 27 1.2157286104708274E-4 0.0 0.0 9.660848189536953 0.0 28 1.2157286104708274E-4 0.0 0.0 9.84308590824653 0.0 29 1.2157286104708274E-4 0.0 0.0 10.045322362598352 0.0 30 1.2157286104708274E-4 0.0 0.0 10.293452571995449 0.0 31 1.2157286104708274E-4 0.0 0.0 10.55404399964987 0.0 32 1.2157286104708274E-4 0.0 0.0 10.756280454001692 0.0 33 1.2157286104708274E-4 0.0 0.0 10.966601503613145 0.0 34 1.2157286104708274E-4 0.0 0.0 11.19205837442496 0.0 35 1.2157286104708274E-4 0.0 0.0 11.484684250965289 0.0 36 1.2157286104708274E-4 0.0 0.0 11.7196845913693 0.0 37 1.2157286104708274E-4 0.0 0.0 11.960824361256188 0.0 38 1.2157286104708274E-4 0.0 0.0 12.181904609070308 0.0 39 1.2157286104708274E-4 0.0 0.0 12.40505159552223 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGGTA 20 7.0341735E-4 45.000004 12 AACCGGT 20 7.0341735E-4 45.000004 30 CAAACGA 20 7.0341735E-4 45.000004 29 TCACCGT 20 7.0341735E-4 45.000004 45 CACGAAC 20 7.0341735E-4 45.000004 27 TGCGGAT 40 6.8175723E-9 45.000004 38 TAGCACG 40 6.8175723E-9 45.000004 1 CTAACGT 20 7.0341735E-4 45.000004 14 TACGCGG 150 0.0 45.000004 2 CGGATTA 20 7.0341735E-4 45.000004 20 GTATGCG 115 0.0 45.000004 1 GTGTCGA 20 7.0341735E-4 45.000004 39 GTCAACG 20 7.0341735E-4 45.000004 1 CGCAGAT 20 7.0341735E-4 45.000004 28 ACGCTAC 20 7.0341735E-4 45.000004 25 CGTACCG 20 7.0341735E-4 45.000004 27 ACCCGGT 20 7.0341735E-4 45.000004 34 TTCGCAC 20 7.0341735E-4 45.000004 44 GCTCGAT 20 7.0341735E-4 45.000004 9 ATACCCG 20 7.0341735E-4 45.000004 28 >>END_MODULE