##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547609_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1975505 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.289689978005622 31.0 31.0 33.0 30.0 34.0 2 31.68957608307749 31.0 31.0 34.0 30.0 34.0 3 31.806651463802925 31.0 31.0 34.0 30.0 34.0 4 35.5789613288754 37.0 35.0 37.0 33.0 37.0 5 35.49023920465906 37.0 35.0 37.0 33.0 37.0 6 35.533550661729535 37.0 35.0 37.0 33.0 37.0 7 35.89321768357964 37.0 35.0 37.0 35.0 37.0 8 35.915138154547826 37.0 35.0 37.0 35.0 37.0 9 37.73697459636903 39.0 37.0 39.0 35.0 39.0 10 37.138570137762244 39.0 37.0 39.0 33.0 39.0 11 36.796756778646476 39.0 35.0 39.0 32.0 39.0 12 35.856949995064554 37.0 35.0 39.0 32.0 39.0 13 35.47700410781041 37.0 35.0 39.0 30.0 39.0 14 36.411471497161486 38.0 35.0 41.0 31.0 41.0 15 36.72214598292589 38.0 35.0 41.0 32.0 41.0 16 36.88537968772542 38.0 35.0 41.0 32.0 41.0 17 36.79576412107284 38.0 35.0 41.0 32.0 41.0 18 36.71948640980408 38.0 35.0 40.0 32.0 41.0 19 36.64778271884911 38.0 35.0 40.0 31.0 41.0 20 36.47962217255841 38.0 35.0 40.0 31.0 41.0 21 36.268916555513655 37.0 35.0 40.0 31.0 41.0 22 36.18973173947927 37.0 35.0 40.0 31.0 41.0 23 36.15889962313434 37.0 35.0 40.0 31.0 41.0 24 36.03912721051073 37.0 35.0 40.0 31.0 41.0 25 35.94869868717113 37.0 35.0 40.0 30.0 41.0 26 35.793220467677884 36.0 34.0 40.0 30.0 41.0 27 35.72796120485648 36.0 34.0 40.0 30.0 41.0 28 35.769260011996934 36.0 35.0 40.0 30.0 41.0 29 35.82833351472155 36.0 35.0 40.0 30.0 41.0 30 35.850282839071525 36.0 35.0 40.0 30.0 41.0 31 35.7210085522436 36.0 34.0 40.0 30.0 41.0 32 35.56839491674281 36.0 34.0 40.0 30.0 41.0 33 35.41944768552851 36.0 34.0 40.0 29.0 41.0 34 35.332988273884396 36.0 34.0 40.0 29.0 41.0 35 35.16448249941154 36.0 34.0 40.0 28.0 41.0 36 35.015244709580585 36.0 34.0 40.0 27.0 41.0 37 34.96691580127613 36.0 34.0 40.0 27.0 41.0 38 34.90976231393998 36.0 34.0 40.0 27.0 41.0 39 34.88435058377478 36.0 34.0 40.0 27.0 41.0 40 34.77850524296319 36.0 34.0 40.0 26.0 41.0 41 34.717842779441206 36.0 34.0 40.0 26.0 41.0 42 34.67860369880107 36.0 34.0 40.0 26.0 41.0 43 34.617724581815786 36.0 34.0 40.0 26.0 41.0 44 34.48046448882691 35.0 34.0 40.0 25.0 41.0 45 34.39448343588095 35.0 34.0 40.0 24.0 41.0 46 34.35209781802628 35.0 34.0 40.0 24.0 41.0 47 34.29849025945265 35.0 33.0 40.0 24.0 41.0 48 34.20060085902086 35.0 33.0 40.0 24.0 41.0 49 34.18025720005771 35.0 33.0 40.0 24.0 41.0 50 34.08031313512241 35.0 33.0 40.0 24.0 41.0 51 33.6298865353416 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 3.0 12 5.0 13 5.0 14 10.0 15 52.0 16 141.0 17 386.0 18 875.0 19 1779.0 20 3034.0 21 4921.0 22 7604.0 23 11422.0 24 16307.0 25 23247.0 26 31126.0 27 37154.0 28 40414.0 29 46469.0 30 53975.0 31 65160.0 32 81466.0 33 106370.0 34 191008.0 35 312466.0 36 131500.0 37 155222.0 38 232912.0 39 420288.0 40 182.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.12150564032994 25.086901830164944 27.75092950916348 14.040663020341634 2 30.68886183532818 26.954424311758256 28.789853733602293 13.566860119311263 3 28.28122429454747 25.78829210758768 32.338971554108944 13.591512043755902 4 24.969109164492117 28.148093778552823 32.01394073920339 14.868856317751664 5 23.221404147293985 32.90839557480239 29.378007142477493 14.492193135426131 6 22.082961065651567 39.86605956451641 27.37978390335636 10.67119546647566 7 87.79441206172599 3.9378285552301815 6.940655680446266 1.3271037025975636 8 88.37294767667001 3.126643567087909 6.406564397457864 2.0938443587842097 9 83.53135021171802 5.70603465949213 8.334729600785622 2.4278855280042317 10 48.86649236524332 28.808330021943757 12.626948552395465 9.698229060417463 11 44.63952255246127 19.564567034758202 22.448791574812514 13.347118837968013 12 41.716219397065565 20.43153522770127 23.58095778041564 14.271287594817528 13 21.615941240341076 39.31657981123814 24.389054950506324 14.678423997914457 14 15.640405870903894 40.6979987395628 27.80215691683899 15.859438472694324 15 14.225729623564606 25.224031323636236 46.15964019326704 14.390598859532119 16 16.22668634096092 21.126749869020834 45.499808909620576 17.146754880397673 17 17.16123219126249 21.016043998876235 28.784437397020003 33.03828641284127 18 21.530393494321707 24.373615860248393 34.31183418923263 19.784156456197277 19 27.518077656093 26.449591370307846 25.895657059840392 20.13667391375876 20 30.324499305240938 23.413557546045187 27.44680474106621 18.815138407647662 21 21.797818785576347 28.52632617988818 29.78514354557442 19.89071148896105 22 23.198017722050817 23.901989617844553 27.676467536148984 25.223525123955646 23 19.424046003426973 29.96712233074581 26.150427359080336 24.458404306746885 24 20.3661342289693 23.44559998582641 38.736373737348174 17.45189204785612 25 17.57621468940853 25.539748064418973 35.295886368295704 21.588150877876796 26 17.371963118291273 34.55810033383869 27.710382914748383 20.359553633121656 27 17.31005489735536 35.12393033679996 29.97213370758363 17.59388105826105 28 15.145899402937477 29.902733731375015 38.22015130308453 16.73121556260298 29 15.575865411628925 25.19462112219407 37.91835505351796 21.311158412659044 30 18.008559836598742 32.83054206392796 31.023307964292673 18.137590135180627 31 27.954776120536266 28.641081647477478 25.71686733265671 17.687274899329537 32 27.46234507126026 27.721418067785198 27.68289627209245 17.13334058886209 33 25.81188101270308 30.691797793475594 24.62975289862592 18.866568295195403 34 18.658975806186266 29.659150445076072 27.811369751025687 23.870503997711978 35 19.350444569869477 28.686639618730403 30.403719555252962 21.55919625614716 36 27.340806527951077 27.048779932219862 27.525215071589287 18.085198468239767 37 18.833462836084948 33.05534534207709 30.48233236564828 17.628859456189684 38 18.643992295640864 33.44871311386203 25.277688489778562 22.62960610071855 39 19.174236461056793 32.17698765632079 29.06578317949081 19.582992703131605 40 23.618112836970802 27.89995469512859 26.17816710157656 22.303765366324054 41 16.940832850334473 25.223727603827882 30.40032801739302 27.43511152844463 42 21.14957947461535 25.781458411899745 26.727090035206185 26.341872078278715 43 21.917585630003465 26.475863133730364 27.07793703382173 24.528614202444437 44 18.270568791271096 30.916398591752486 28.713518821769625 22.099513795206796 45 17.73713556786746 37.65902895715273 23.671567523240896 20.932267951738922 46 22.239275527017142 33.475642936869306 25.03106800539609 19.25401353071746 47 20.405617804055165 28.80514096395605 27.546121118397576 23.24312011359121 48 21.911814953644765 25.828433742258312 31.264259012252566 20.995492291844364 49 20.846669585751492 24.88376389834498 32.10353808266747 22.16602843323606 50 18.827236580013718 32.15673966909727 28.94029627867305 20.075727472215966 51 17.33587108106535 33.649826246959634 25.126233545346633 23.88806912662838 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 962.0 1 2061.0 2 3160.0 3 11397.5 4 19635.0 5 14015.5 6 8396.0 7 8452.0 8 8508.0 9 9268.5 10 10029.0 11 10126.0 12 10223.0 13 10219.5 14 10216.0 15 9764.5 16 9313.0 17 8633.0 18 7953.0 19 7990.0 20 8027.0 21 7735.5 22 7444.0 23 7733.0 24 8022.0 25 10087.0 26 14563.5 27 16975.0 28 20913.5 29 24852.0 30 28830.5 31 32809.0 32 38253.0 33 43697.0 34 51547.5 35 59398.0 36 63411.5 37 67425.0 38 77347.0 39 87269.0 40 116487.5 41 145706.0 42 176757.0 43 207808.0 44 217398.0 45 226988.0 46 215819.5 47 204651.0 48 183264.0 49 161877.0 50 148527.5 51 135178.0 52 119247.5 53 103317.0 54 92843.5 55 82370.0 56 73166.0 57 63962.0 58 57679.0 59 51396.0 60 47591.5 61 43787.0 62 37646.5 63 31506.0 64 26355.5 65 21205.0 66 17701.5 67 14198.0 68 11518.0 69 8838.0 70 7838.0 71 6838.0 72 5429.0 73 4020.0 74 3328.5 75 2064.5 76 1492.0 77 1115.5 78 739.0 79 545.0 80 351.0 81 203.0 82 55.0 83 62.0 84 69.0 85 48.5 86 28.0 87 16.5 88 5.0 89 7.5 90 10.0 91 6.5 92 3.0 93 4.0 94 5.0 95 3.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1975505.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.133717227582636 #Duplication Level Percentage of deduplicated Percentage of total 1 79.24539167441036 13.57768132538378 2 8.638267986859963 2.9601128204587623 3 2.9185969557498055 1.50019244823302 4 1.3526461505374585 0.9270342660914792 5 0.7961137626880502 0.682019404544194 6 0.5006371012173083 0.5146664715536415 7 0.34074504410339085 0.408676046265737 8 0.2569989118059241 0.35226773461433214 9 0.19187453573298274 0.29587716345803633 >10 2.6810420383393523 11.841828428322094 >50 1.4295135881176433 17.695502157440867 >100 1.6374037929031569 46.907043535185494 >500 0.008076343150955248 0.8947404738605641 >1k 0.0020938667428402496 0.5227605013963658 >5k 2.991238204057499E-4 0.2864420041474792 >10k+ 2.991238204057499E-4 0.6331552190441865 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12354 0.6253590853984171 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5589 0.28291500148063403 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2252 0.11399616806841795 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.061996805880015E-5 0.0 0.0 0.05623878451332697 0.0 2 5.061996805880015E-5 0.0 0.0 0.20445405098949382 0.0 3 5.061996805880015E-5 0.0 0.0 0.3113634235296798 0.0 4 5.061996805880015E-5 0.0 0.0 0.6102237149488359 0.0 5 5.061996805880015E-5 0.0 0.0 0.9680056491884353 0.0 6 5.061996805880015E-5 0.0 0.0 1.429609137916634 0.0 7 5.061996805880015E-5 0.0 0.0 1.6203957975302519 0.0 8 5.061996805880015E-5 0.0 0.0 2.1502856231697716 0.0 9 5.061996805880015E-5 0.0 0.0 2.2993108091348793 0.0 10 5.061996805880015E-5 0.0 0.0 2.600550239052799 0.0 11 5.061996805880015E-5 0.0 0.0 3.005864323299612 0.0 12 5.061996805880015E-5 0.0 0.0 3.323808342676936 0.0 13 5.061996805880015E-5 0.0 0.0 3.4591155172981085 0.0 14 5.061996805880015E-5 0.0 0.0 3.512722063472378 0.0 15 5.061996805880015E-5 0.0 0.0 3.600851427862749 0.0 16 5.061996805880015E-5 0.0 0.0 3.8079883371593595 0.0 17 5.061996805880015E-5 0.0 0.0 4.037651132242136 0.0 18 5.061996805880015E-5 0.0 0.0 4.325982470305061 0.0 19 5.061996805880015E-5 0.0 0.0 4.46650350163629 0.0 20 5.061996805880015E-5 0.0 0.0 4.62894297913698 0.0 21 5.061996805880015E-5 0.0 0.0 4.849392940033055 0.0 22 5.061996805880015E-5 0.0 0.0 5.068830501567954 0.0 23 5.061996805880015E-5 0.0 0.0 5.311502628441842 0.0 24 5.061996805880015E-5 0.0 0.0 5.49975828965252 0.0 25 5.061996805880015E-5 0.0 0.0 5.654706011880506 0.0 26 5.061996805880015E-5 0.0 0.0 5.805705376599907 0.0 27 5.061996805880015E-5 0.0 0.0 5.943290449783726 0.0 28 5.061996805880015E-5 0.0 0.0 6.094796014183715 0.0 29 5.061996805880015E-5 0.0 0.0 6.2589059506303455 0.0 30 5.061996805880015E-5 0.0 0.0 6.470699896988365 0.0 31 5.061996805880015E-5 0.0 0.0 6.668927691906626 0.0 32 5.061996805880015E-5 0.0 0.0 6.853285615576777 0.0 33 1.012399361176003E-4 0.0 0.0 7.032176582696576 0.0 34 1.012399361176003E-4 0.0 0.0 7.228278338956368 0.0 35 1.012399361176003E-4 0.0 0.0 7.470393646181609 0.0 36 1.012399361176003E-4 0.0 0.0 7.692969645736153 0.0 37 1.012399361176003E-4 0.0 0.0 7.906383431072055 0.0 38 1.012399361176003E-4 0.0 0.0 8.121417055385837 0.0 39 1.012399361176003E-4 0.0 0.0 8.331996122510446 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCACG 35 1.2125201E-7 45.000004 1 GATCGAC 70 0.0 45.000004 9 CATTACG 30 2.1662981E-6 45.000004 45 CGTAAGT 30 2.1662981E-6 45.000004 24 CGAACGC 45 3.8562575E-10 45.0 18 CGTATCA 20 7.034519E-4 45.0 42 CGTGAAT 25 3.8918282E-5 45.0 26 ATCGTTC 25 3.8918282E-5 45.0 42 CCGTCCA 20 7.034519E-4 45.0 34 TACGCCG 25 3.8918282E-5 45.0 35 CGCTATA 40 6.8193913E-9 45.0 26 TATTACG 110 0.0 45.0 1 CTACCGT 20 7.034519E-4 45.0 40 ACGCTAA 25 3.8918282E-5 45.0 25 TACACCG 40 6.8193913E-9 45.0 1 GTACGTA 20 7.034519E-4 45.0 26 GTTGCGA 20 7.034519E-4 45.0 25 AAATGCG 50 2.1827873E-11 45.0 1 CGGTCTA 125 0.0 44.999996 31 CGTAAGG 420 0.0 43.392857 2 >>END_MODULE