##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547608_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 862114 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.260255604247234 31.0 31.0 33.0 30.0 34.0 2 31.679127122399127 31.0 31.0 34.0 30.0 34.0 3 31.814671841543 31.0 31.0 34.0 30.0 34.0 4 35.58471153466943 37.0 35.0 37.0 33.0 37.0 5 35.48100135248934 37.0 35.0 37.0 33.0 37.0 6 35.52516024562877 37.0 35.0 37.0 33.0 37.0 7 35.89901799529993 37.0 35.0 37.0 35.0 37.0 8 35.93015888849966 37.0 35.0 37.0 35.0 37.0 9 37.75958631921068 39.0 37.0 39.0 35.0 39.0 10 37.0834877985974 39.0 37.0 39.0 33.0 39.0 11 36.756671391486506 39.0 35.0 39.0 32.0 39.0 12 36.23726560524478 38.0 35.0 39.0 32.0 39.0 13 36.04491401369192 38.0 35.0 39.0 32.0 39.0 14 37.01011467160956 39.0 35.0 41.0 31.0 41.0 15 37.25089141343256 39.0 35.0 41.0 32.0 41.0 16 37.3414478827626 39.0 35.0 41.0 32.0 41.0 17 37.25373906467126 39.0 35.0 41.0 32.0 41.0 18 37.16016443301002 39.0 35.0 41.0 32.0 41.0 19 37.14386380455485 39.0 35.0 41.0 32.0 41.0 20 37.00738185437193 39.0 35.0 41.0 32.0 41.0 21 36.827798875786726 38.0 35.0 41.0 31.0 41.0 22 36.79158788744876 38.0 35.0 41.0 31.0 41.0 23 36.72267240759343 38.0 35.0 40.0 31.0 41.0 24 36.65467327986786 38.0 35.0 40.0 31.0 41.0 25 36.54019538019334 38.0 35.0 40.0 31.0 41.0 26 36.43287430664622 38.0 35.0 40.0 31.0 41.0 27 36.34148036106594 38.0 35.0 40.0 30.0 41.0 28 36.38249929823666 38.0 35.0 40.0 30.0 41.0 29 36.391735895716806 38.0 35.0 40.0 30.0 41.0 30 36.40606230730506 38.0 35.0 40.0 30.0 41.0 31 36.33086459563352 38.0 35.0 40.0 30.0 41.0 32 36.23070150815322 38.0 35.0 40.0 30.0 41.0 33 36.119933094695135 38.0 35.0 41.0 30.0 41.0 34 36.03421241274356 38.0 35.0 41.0 30.0 41.0 35 35.883488726548926 38.0 35.0 41.0 29.0 41.0 36 35.78403900180255 38.0 35.0 40.0 29.0 41.0 37 35.729338579352614 38.0 35.0 40.0 29.0 41.0 38 35.65455844586679 38.0 34.0 40.0 29.0 41.0 39 35.57247417394915 38.0 34.0 40.0 28.0 41.0 40 35.508395641411695 38.0 34.0 40.0 27.0 41.0 41 35.43955323773886 38.0 34.0 40.0 27.0 41.0 42 35.39269980536217 38.0 34.0 40.0 27.0 41.0 43 35.365087447831726 38.0 34.0 40.0 27.0 41.0 44 35.26210338771902 38.0 34.0 40.0 27.0 41.0 45 35.17694991613638 38.0 34.0 40.0 27.0 41.0 46 35.145563115782835 37.0 34.0 40.0 27.0 41.0 47 35.10015728778328 37.0 34.0 40.0 27.0 41.0 48 34.96678049538692 37.0 34.0 40.0 26.0 41.0 49 34.8825816539344 37.0 34.0 40.0 26.0 41.0 50 34.81302124777002 37.0 34.0 40.0 26.0 41.0 51 34.41385014046866 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 2.0 14 6.0 15 15.0 16 51.0 17 152.0 18 301.0 19 571.0 20 1116.0 21 1745.0 22 2706.0 23 4040.0 24 6091.0 25 8431.0 26 11407.0 27 13729.0 28 15541.0 29 17777.0 30 21676.0 31 26488.0 32 32634.0 33 42237.0 34 68264.0 35 98691.0 36 63678.0 37 80194.0 38 122567.0 39 221953.0 40 48.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.05388150523017 25.141570604351628 29.347278898150357 13.457268992267842 2 30.30063309492712 26.281675045295632 30.30701276165333 13.110679098123915 3 28.19418313587298 25.38724577028096 32.49605040632677 13.922520687519285 4 25.286447036006837 28.55399633923124 31.784311587562662 14.375245037199258 5 23.34633238759607 32.400935375136 30.040922662200124 14.211809575067798 6 21.76173916674593 41.43964719283065 26.466917368236683 10.331696272186742 7 90.06743887699307 2.975824542925878 5.66873986502945 1.2879967150516056 8 90.76804227747142 2.0754795769469 5.528271203112349 1.6282069424693253 9 85.97575262668278 4.800293232681525 6.900131537128501 2.323822603507193 10 42.26424811567844 35.0600964605609 12.773252725277631 9.902402698483032 11 33.02521476278079 24.21199516537256 27.084121125512407 15.678668946334243 12 32.38075242949308 23.19240842858369 27.243728787608134 17.18311035431509 13 23.215491222738525 31.01503977432219 28.520010114671614 17.249458888267675 14 17.516592933185173 34.00130377189095 29.94267579461649 18.539427500307383 15 16.280677497407538 28.038983243515357 39.3906142343124 16.289725024764707 16 20.526519694611153 25.84843767761572 36.82633619219732 16.798706435575806 17 20.51271641569444 25.252460811447207 29.095804035197204 25.139018737661146 18 21.76278311221022 26.416923979891287 32.70936326286315 19.110929645035345 19 24.64233268454056 27.979594345991366 28.035967401062965 19.342105568405106 20 26.869184353809356 27.394636904168124 28.450645738266633 17.285533003755884 21 23.183824876988428 28.06403793465829 30.701044177452168 18.05109301090111 22 23.098917312559593 23.97304764799087 30.259919221819853 22.668115817629687 23 19.516444460941358 29.14162164168544 29.387064819733816 21.954869077639383 24 19.629886534727426 26.94608833634531 35.61095168388403 17.81307344504323 25 19.502757175965126 28.36840603446876 32.31881166527861 19.810025124287506 26 18.26046207346128 33.28214134093635 28.408191956052214 20.04920462955015 27 17.925007597603102 32.752629002660896 30.659054370999662 18.66330902873634 28 17.431105399053955 29.314104631174065 34.27852928962991 18.97626068014207 29 17.265002076291537 26.405672567665068 35.04188541190608 21.28743994413732 30 19.114177475368688 29.919477006521177 31.951458855789372 19.01488666232076 31 24.02211308481245 28.350194985813943 28.44333812001661 19.184353809357 32 24.737679703612283 27.20661072665564 28.33256390686151 19.72314566287057 33 23.517771431620414 28.54448483611216 28.00766487958669 19.930078852680737 34 19.59914814050114 28.40900391363555 29.52590956648425 22.46593837937906 35 19.36089658676231 28.21877385125401 31.06677307177473 21.353556490208952 36 24.83024286811257 27.305669551822614 28.495419399290583 19.368668180774236 37 19.709342383953864 30.572870873225582 30.812166372428706 18.90562037039185 38 20.244654419253138 30.580294485416083 28.177596002384835 20.997455092945945 39 19.491737751619855 30.756257293119006 28.892698645422765 20.859306309838374 40 22.698622223975022 27.867312211610066 28.364810222313984 21.069255342100927 41 18.47435489970004 26.7863646803091 30.107155202212237 24.632125217778622 42 21.041764778207988 26.393841185736456 29.19300695731655 23.371387078739005 43 20.487661724551508 27.46608917150168 29.22049752120949 22.82575158273732 44 19.48825793340556 29.55142823338909 29.399708159245762 21.560605673959593 45 18.421461662842734 33.364613032615175 26.636500509213402 21.577424795328692 46 21.19162894930369 31.135557478477327 27.6564352278237 20.01637834439529 47 19.96963278638324 28.36144639804017 29.433926371686344 22.23499444389025 48 21.079462808862864 26.562612369129834 31.539216391335717 20.81870843067158 49 20.431636651301336 26.85317719002359 31.151912624084517 21.56327353459055 50 19.381543508167134 30.240780221641224 30.01702791046196 20.360648359729687 51 18.97254887404682 30.563823345868414 28.05557037700351 22.408057403081262 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 452.0 1 779.0 2 1106.0 3 4316.0 4 7526.0 5 5334.5 6 3143.0 7 3139.0 8 3135.0 9 3470.5 10 3806.0 11 3996.0 12 4186.0 13 4134.0 14 4082.0 15 3894.5 16 3707.0 17 3562.0 18 3417.0 19 3333.0 20 3249.0 21 3354.0 22 3459.0 23 4311.0 24 5163.0 25 6468.0 26 9367.0 27 10961.0 28 13363.0 29 15765.0 30 17195.5 31 18626.0 32 22818.0 33 27010.0 34 30678.5 35 34347.0 36 36574.5 37 38802.0 38 42267.0 39 45732.0 40 53037.5 41 60343.0 42 67264.0 43 74185.0 44 74851.0 45 75517.0 46 74099.0 47 72681.0 48 70742.5 49 68804.0 50 67576.0 51 66348.0 52 59759.5 53 53171.0 54 47456.5 55 41742.0 56 36325.5 57 30909.0 58 26952.5 59 22996.0 60 19494.5 61 15993.0 62 13717.0 63 11441.0 64 9811.5 65 8182.0 66 6878.5 67 5575.0 68 4430.5 69 3286.0 70 2841.5 71 2397.0 72 1809.5 73 1222.0 74 1025.0 75 674.5 76 521.0 77 397.0 78 273.0 79 200.5 80 128.0 81 93.0 82 58.0 83 57.0 84 56.0 85 30.5 86 5.0 87 3.5 88 2.0 89 2.5 90 3.0 91 1.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 862114.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.275533544195657 #Duplication Level Percentage of deduplicated Percentage of total 1 74.87548997900332 18.17642468623381 2 6.978581837450506 3.3881759497188866 3 2.6121892177083623 1.902368609347967 4 1.562329912348345 1.5170556877725003 5 1.1176815812295118 1.356615835843333 6 0.9168847872252717 1.3354720445069868 7 0.7605074558029206 1.2923206977768287 8 0.6565945957168273 1.2751347306609142 9 0.5792422875339719 1.2655274023122804 >10 8.822189614182907 50.41326990058914 >50 1.085929006202027 16.2115636288304 >100 0.03092988713648338 1.1128849402298655 >500 4.832794865075528E-4 0.06558113868738084 >1k 9.665589730151056E-4 0.6876047474896944 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4849 0.5624546173707885 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1012 0.11738586776226809 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.038741976119167534 0.0 2 0.0 0.0 0.0 0.12840529210754031 0.0 3 0.0 0.0 0.0 0.20797713527445327 0.0 4 0.0 0.0 0.0 0.3721085610487708 0.0 5 0.0 0.0 0.0 0.6639493152877693 0.0 6 0.0 0.0 0.0 1.1032183678724623 0.0 7 0.0 0.0 0.0 1.3166472183493134 0.0 8 0.0 0.0 0.0 1.8410558232437937 0.0 9 0.0 0.0 0.0 2.0360416371848733 0.0 10 0.0 0.0 0.0 2.3458614521977372 0.0 11 0.0 0.0 0.0 2.7255096193774837 0.0 12 0.0 0.0 0.0 3.022570100937927 0.0 13 0.0 0.0 0.0 3.1612988537478803 0.0 14 0.0 0.0 0.0 3.2255594967718886 0.0 15 0.0 0.0 0.0 3.311627000605488 0.0 16 0.0 0.0 0.0 3.465782947498823 0.0 17 0.0 0.0 0.0 3.677587882809002 0.0 18 0.0 0.0 0.0 3.91061970922639 0.0 19 0.0 0.0 0.0 4.05920794697685 0.0 20 0.0 0.0 0.0 4.208144166548739 0.0 21 0.0 0.0 0.0 4.4115975381446075 0.0 22 0.0 0.0 0.0 4.6459052979072375 0.0 23 0.0 0.0 0.0 4.891812451717522 0.0 24 0.0 0.0 0.0 5.079838629230009 0.0 25 0.0 0.0 0.0 5.243274091361467 0.0 26 0.0 0.0 0.0 5.403693711040535 0.0 27 0.0 0.0 0.0 5.567129173171994 0.0 28 0.0 0.0 0.0 5.738452223255857 0.0 29 0.0 0.0 0.0 5.937265837232663 0.0 30 0.0 0.0 0.0 6.176445342495308 0.0 31 0.0 0.0 0.0 6.37908675650784 0.0 32 0.0 0.0 0.0 6.574652540151303 0.0 33 0.0 0.0 0.0 6.75861892974711 0.0 34 0.0 0.0 0.0 6.974367659033492 0.0 35 0.0 0.0 0.0 7.217026982510434 0.0 36 0.0 0.0 0.0 7.424772129903934 0.0 37 0.0 0.0 0.0 7.6421447743569875 0.0 38 0.0 0.0 0.0 7.887819940286319 0.0 39 0.0 0.0 0.0 8.273847774192276 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGATC 20 7.032303E-4 45.000004 33 GTCTACG 20 7.032303E-4 45.000004 1 TACGATA 20 7.032303E-4 45.000004 43 TATTACG 20 7.032303E-4 45.000004 1 GCGTGAT 20 7.032303E-4 45.000004 16 ATCGATC 20 7.032303E-4 45.000004 11 AGCGTCG 25 3.8899918E-5 45.0 17 CGGGCTA 25 3.8899918E-5 45.0 6 ATACCGG 25 3.8899918E-5 45.0 2 TACTCGC 30 2.1648684E-6 44.999996 45 CGTATGG 85 0.0 42.35294 2 CGTTTTT 2460 0.0 41.615852 1 ATGACGG 65 0.0 41.538464 2 ACGGGAC 320 0.0 41.48438 5 ATATGCG 60 3.6379788E-12 41.249996 1 ACGGGCT 55 6.002665E-11 40.909092 5 GCTACGA 55 6.002665E-11 40.909092 10 CGGGACC 260 0.0 40.67308 6 TATGCGG 155 0.0 40.64516 2 GCGATAT 95 0.0 40.26316 9 >>END_MODULE