##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547607_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2118475 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.278109961174902 31.0 31.0 33.0 30.0 34.0 2 31.687895774082772 31.0 31.0 34.0 30.0 34.0 3 31.784940110220795 31.0 31.0 34.0 30.0 34.0 4 35.58437083279246 37.0 35.0 37.0 33.0 37.0 5 35.48958661301172 37.0 35.0 37.0 33.0 37.0 6 35.54567884917216 37.0 35.0 37.0 33.0 37.0 7 35.91529614463234 37.0 35.0 37.0 35.0 37.0 8 35.95894074747165 37.0 35.0 37.0 35.0 37.0 9 37.79428220772017 39.0 38.0 39.0 35.0 39.0 10 37.153116746716385 39.0 37.0 39.0 33.0 39.0 11 36.773911422131484 39.0 37.0 39.0 32.0 39.0 12 36.39735894924415 38.0 35.0 39.0 32.0 39.0 13 36.26759815433272 39.0 35.0 39.0 32.0 39.0 14 37.30892033184248 39.0 35.0 41.0 32.0 41.0 15 37.50773126895526 39.0 35.0 41.0 32.0 41.0 16 37.55429731292557 39.0 35.0 41.0 32.0 41.0 17 37.4572732744073 39.0 35.0 41.0 32.0 41.0 18 37.3559508608787 39.0 36.0 41.0 32.0 41.0 19 37.30738290515583 39.0 36.0 41.0 32.0 41.0 20 37.158471542029055 39.0 35.0 41.0 32.0 41.0 21 37.00260375978003 39.0 35.0 41.0 32.0 41.0 22 36.95948170263987 39.0 35.0 41.0 31.0 41.0 23 36.87166239865941 38.0 35.0 41.0 31.0 41.0 24 36.78649453026352 38.0 35.0 41.0 31.0 41.0 25 36.68220063961104 38.0 35.0 40.0 31.0 41.0 26 36.57171550289713 38.0 35.0 40.0 31.0 41.0 27 36.49746822596443 38.0 35.0 40.0 31.0 41.0 28 36.508364271468864 38.0 35.0 40.0 31.0 41.0 29 36.5246745890322 38.0 35.0 40.0 31.0 41.0 30 36.51455504549263 38.0 35.0 40.0 30.0 41.0 31 36.432280768005285 38.0 35.0 41.0 30.0 41.0 32 36.30773268506827 38.0 35.0 41.0 30.0 41.0 33 36.16118764677421 38.0 35.0 41.0 30.0 41.0 34 36.04543929005535 38.0 35.0 41.0 30.0 41.0 35 35.86383365392558 38.0 35.0 41.0 29.0 41.0 36 35.77228666847614 38.0 35.0 41.0 28.0 41.0 37 35.74780490683157 38.0 35.0 41.0 28.0 41.0 38 35.65879134754953 38.0 35.0 40.0 28.0 41.0 39 35.59597351868679 38.0 35.0 40.0 27.0 41.0 40 35.54056243288215 38.0 35.0 40.0 27.0 41.0 41 35.4619072682 38.0 34.0 40.0 27.0 41.0 42 35.44214446712848 38.0 34.0 40.0 27.0 41.0 43 35.399638419145845 38.0 34.0 40.0 27.0 41.0 44 35.27838846339938 38.0 34.0 40.0 27.0 41.0 45 35.19091799525602 38.0 34.0 40.0 26.0 41.0 46 35.16133161826314 38.0 34.0 40.0 26.0 41.0 47 35.11188850470268 38.0 34.0 40.0 26.0 41.0 48 34.97785293666435 38.0 34.0 40.0 26.0 41.0 49 34.911431100201796 37.0 34.0 40.0 26.0 41.0 50 34.83463340374562 37.0 34.0 40.0 26.0 41.0 51 34.42920072221763 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 2.0 12 0.0 13 4.0 14 13.0 15 24.0 16 132.0 17 271.0 18 724.0 19 1437.0 20 2547.0 21 4306.0 22 6497.0 23 10024.0 24 15003.0 25 22209.0 26 29982.0 27 35219.0 28 38407.0 29 42782.0 30 51269.0 31 62661.0 32 77019.0 33 98465.0 34 154154.0 35 221551.0 36 158473.0 37 202343.0 38 314031.0 39 568759.0 40 165.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.71281228242014 23.92928875724283 29.396381831270133 14.9615171290669 2 31.566999846587755 25.696786603570963 29.74384875913098 12.992364790710297 3 27.546230189169098 26.044442346499252 33.12972775227463 13.279599712057022 4 24.31305538181947 28.54935743872361 32.960549451846255 14.177037727610664 5 22.52020911268719 32.94846528752994 31.519607264659722 13.011718335123144 6 21.92959558172742 40.694131391685055 27.52432764134578 9.851945385241741 7 89.74559529850482 2.6966095894452375 6.469229044477749 1.0885660675721922 8 90.66073472663119 1.9086371092413175 6.1875169638537155 1.2431112002737819 9 85.89910194833547 4.942659224206092 7.328432008874309 1.8298068185841228 10 41.97141811916591 37.20416809261379 12.28308098986299 8.54133279835731 11 28.436446028393064 24.387306907091187 30.893779723621943 16.282467340893803 12 30.21947391401834 22.723846162923802 29.846469748285916 17.210210174771948 13 22.411168411239217 30.156268070192 30.13804741618381 17.29451610238497 14 17.371033408465998 33.05099186915116 30.788184897154792 18.789789825228056 15 16.630736732791277 27.829783216700694 38.46823776537367 17.071242285134353 16 20.5932097381371 25.945550454926302 36.766353154981765 16.69488665195483 17 20.072032948229268 25.78534087020144 30.14857385619372 23.994052325375563 18 21.075443420384946 26.037786615371907 33.975052809214176 18.91171715502897 19 24.440411144809357 27.904223557039852 28.91546985449439 18.739895443656405 20 25.49480168517448 27.667921500135712 29.824283977861434 17.012992836828378 21 22.74442700527502 28.08175692420255 31.17327322720353 18.000542843318897 22 22.940417045280213 24.73977743423925 30.94490140313197 21.374904117348564 23 19.78196580087091 29.026917948052255 30.427028876904377 20.764087374172462 24 19.399520881766367 27.07721356164222 35.40693187316348 18.11633368342794 25 19.30950329836321 28.7642761892399 32.527502094667156 19.398718417729736 26 18.770908318483816 32.906595546324596 29.038246852098798 19.28424928309279 27 17.879229162487167 31.977955840876106 31.375635775734906 18.767179220901827 28 17.062509588265144 29.910478056148882 34.889484180837634 18.137528174748343 29 18.031414106845727 26.56273970662859 35.20178430238733 20.204061884138355 30 19.184743742550655 29.88012603405752 32.48232808978157 18.452802133610263 31 23.385265344174467 28.304983537686308 29.443727209431316 18.866023908707916 32 24.017087763603538 28.43918384687098 29.282951179504124 18.26077721002136 33 23.063430061718925 28.54657241647883 29.260859816613365 19.129137705188874 34 19.71432280295968 28.81487862731446 29.817722654267808 21.653075915458054 35 19.490671355574175 28.74350653182124 31.11403249979348 20.651789612811104 36 23.15722394647093 27.831812978675696 29.565512927931646 19.445450146921726 37 19.93164894558586 30.678341731670187 30.87046106279281 18.519548259951144 38 19.79636294976339 30.93022103163833 28.995338628022516 20.27807739057577 39 19.291518663189322 30.55221326661868 29.589964479165438 20.566303591026564 40 22.050154002289382 28.6007623408348 28.94251761290551 20.406566043970308 41 17.980575649936863 28.032098561465208 30.69028428468592 23.297041503912013 42 20.136513293760842 27.849136761113535 29.43541934646385 22.578930598661774 43 21.25812199813545 28.011045681445378 28.981885554467247 21.748946765951924 44 20.042200167573373 30.048029832780653 29.425223332821957 20.484546666824013 45 18.732012414590685 32.502720117065344 27.579461641038954 21.185805827305018 46 20.708906170712424 31.069424940110217 28.447538913605307 19.77412997557205 47 19.584984481761644 29.29262795171055 30.245105559423642 20.877282007104167 48 20.91244881341531 27.578564769468606 31.587108651270373 19.921877765845714 49 20.377724542418484 27.140324997934833 31.40447727728673 21.077473182359952 50 18.844593398553204 30.70614475035108 30.394694296604868 20.05456755449085 51 18.618109725156067 30.832698049304337 28.865056231487273 21.684135994052326 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 952.0 1 1601.5 2 2251.0 3 15263.5 4 28276.0 5 19393.5 6 10511.0 7 10335.5 8 10160.0 9 10676.5 10 11193.0 11 11817.5 12 12442.0 13 12246.0 14 12050.0 15 11648.0 16 11246.0 17 10883.0 18 10520.0 19 10385.5 20 10251.0 21 10963.5 22 11676.0 23 12836.0 24 13996.0 25 16714.5 26 24059.5 27 28686.0 28 34481.5 29 40277.0 30 47387.5 31 54498.0 32 61358.5 33 68219.0 34 76752.0 35 85285.0 36 91732.5 37 98180.0 38 107465.5 39 116751.0 40 131339.0 41 145927.0 42 159840.5 43 173754.0 44 174373.5 45 174993.0 46 175231.5 47 175470.0 48 172249.0 49 169028.0 50 162238.0 51 155448.0 52 143559.5 53 131671.0 54 115403.5 55 99136.0 56 87142.0 57 75148.0 58 64502.0 59 53856.0 60 47001.0 61 40146.0 62 33149.5 63 26153.0 64 21387.0 65 16621.0 66 13116.5 67 9612.0 68 8044.5 69 6477.0 70 4807.5 71 3138.0 72 2502.0 73 1866.0 74 1623.5 75 1143.5 76 906.0 77 653.5 78 401.0 79 339.0 80 277.0 81 195.0 82 113.0 83 91.5 84 70.0 85 43.5 86 17.0 87 13.0 88 9.0 89 6.0 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2118475.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.243235066601127 #Duplication Level Percentage of deduplicated Percentage of total 1 76.35130228664822 15.455973598297401 2 7.2708219608999745 2.9436991616380785 3 2.714113929495942 1.648273388169685 4 1.5173345445164639 1.2286303943728372 5 0.9912379753987433 1.0032931671469272 6 0.7229348937856357 0.8780724595650565 7 0.5526845548031885 0.7831686352392515 8 0.4637632635747439 0.751045500783811 9 0.4092637407787347 0.7456339897938392 >10 6.434145832234347 32.70679491250411 >50 2.194184493620173 31.191099702079384 >100 0.37608241663982567 9.43083584154237 >500 0.0014200717359915435 0.18718987862980516 >1k 4.733572453305145E-4 0.144213343914951 >5k 0.0 0.0 >10k+ 2.3667862266525726E-4 0.9020760263224908 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18828 0.8887525224512915 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.720376686059547E-5 0.0 0.0 0.02973837312217515 0.0 2 4.720376686059547E-5 0.0 0.0 0.09327464331653666 0.0 3 4.720376686059547E-5 0.0 0.0 0.162664180601612 0.0 4 4.720376686059547E-5 0.0 0.0 0.26226412867746846 0.0 5 4.720376686059547E-5 0.0 0.0 0.4585373912838244 0.0 6 4.720376686059547E-5 0.0 0.0 0.7771628175928439 0.0 7 4.720376686059547E-5 0.0 0.0 0.9455858577514485 0.0 8 4.720376686059547E-5 0.0 0.0 1.3271811090525023 0.0 9 4.720376686059547E-5 0.0 0.0 1.4961705944134343 0.0 10 4.720376686059547E-5 0.0 0.0 1.7384675297088708 0.0 11 4.720376686059547E-5 0.0 0.0 2.022445391142213 0.0 12 4.720376686059547E-5 0.0 0.0 2.236939307756759 0.0 13 4.720376686059547E-5 0.0 0.0 2.354429483472781 0.0 14 4.720376686059547E-5 0.0 0.0 2.420278738243312 0.0 15 4.720376686059547E-5 0.0 0.0 2.4897626830621085 0.0 16 4.720376686059547E-5 0.0 0.0 2.6189121891926974 0.0 17 4.720376686059547E-5 0.0 0.0 2.7879960820873504 0.0 18 4.720376686059547E-5 0.0 0.0 2.9742149423523996 0.0 19 4.720376686059547E-5 0.0 0.0 3.100532222471353 0.0 20 4.720376686059547E-5 0.0 0.0 3.2280295967618216 0.0 21 4.720376686059547E-5 0.0 0.0 3.3904577585291307 0.0 22 4.720376686059547E-5 0.0 0.0 3.583568368755827 0.0 23 4.720376686059547E-5 0.0 0.0 3.7916425730773318 0.0 24 4.720376686059547E-5 0.0 0.0 3.9526546218388225 0.0 25 4.720376686059547E-5 0.0 0.0 4.092613790580488 0.0 26 4.720376686059547E-5 0.0 0.0 4.232997793223899 0.0 27 4.720376686059547E-5 0.0 0.0 4.376874874614995 0.0 28 4.720376686059547E-5 0.0 0.0 4.532600101488098 0.0 29 4.720376686059547E-5 0.0 0.0 4.709047782013005 0.0 30 4.720376686059547E-5 0.0 0.0 4.933926527336881 0.0 31 4.720376686059547E-5 0.0 0.0 5.128689269403698 0.0 32 4.720376686059547E-5 0.0 0.0 5.316607465275729 0.0 33 4.720376686059547E-5 0.0 0.0 5.498058745087858 0.0 34 4.720376686059547E-5 0.0 0.0 5.69485124912968 0.0 35 4.720376686059547E-5 0.0 0.0 5.92548885401055 0.0 36 4.720376686059547E-5 0.0 0.0 6.124641546395402 0.0 37 4.720376686059547E-5 0.0 0.0 6.328278596632011 0.0 38 4.720376686059547E-5 4.720376686059547E-5 0.0 6.55013630087681 0.0 39 4.720376686059547E-5 4.720376686059547E-5 0.0 6.874001345307356 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 9235 0.0 42.319977 1 TACGGGA 1065 0.0 40.35211 4 TAGGGAC 2780 0.0 39.73921 5 TACGACG 40 3.4600635E-7 39.375004 1 GCGTAAG 155 0.0 39.193546 1 TCGTCCC 810 0.0 38.61111 38 TCGTAAG 140 0.0 38.57143 1 AGGGCGA 1955 0.0 38.4399 6 CATACGA 860 0.0 38.197674 18 AGGGATC 3040 0.0 38.116776 6 TAACGGG 550 0.0 38.045456 3 ACGGGAA 870 0.0 38.01724 5 TATGGGA 3120 0.0 38.004807 4 ACGGGAT 1190 0.0 37.62605 5 CGGTATG 60 1.5643309E-10 37.500004 1 TTGGGAC 1880 0.0 37.460106 5 CGAGGGA 1545 0.0 37.427185 4 AAGGGAT 4305 0.0 37.421604 5 ACATACG 890 0.0 37.415733 17 CGTAAGG 385 0.0 37.402596 2 >>END_MODULE