##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547606_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1400118 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.297108529423948 31.0 31.0 33.0 30.0 34.0 2 31.706903275295367 31.0 31.0 34.0 30.0 34.0 3 31.862960836158095 31.0 31.0 34.0 30.0 34.0 4 35.625934385530364 37.0 35.0 37.0 33.0 37.0 5 35.53342218298744 37.0 35.0 37.0 33.0 37.0 6 35.56140553867603 37.0 35.0 37.0 33.0 37.0 7 35.88741591780121 37.0 35.0 37.0 35.0 37.0 8 35.900359826814594 37.0 35.0 37.0 35.0 37.0 9 37.710765806881994 39.0 37.0 39.0 35.0 39.0 10 37.10376839666371 39.0 37.0 39.0 33.0 39.0 11 36.82920439562951 39.0 37.0 39.0 32.0 39.0 12 36.25970596763987 38.0 35.0 39.0 32.0 39.0 13 36.048072376756814 38.0 35.0 39.0 32.0 39.0 14 37.03480992316362 39.0 35.0 41.0 31.0 41.0 15 37.23970693898657 39.0 35.0 41.0 32.0 41.0 16 37.316498323712715 39.0 35.0 41.0 32.0 41.0 17 37.228098631686755 39.0 35.0 41.0 32.0 41.0 18 37.129304101511444 39.0 35.0 41.0 32.0 41.0 19 37.09920092449351 39.0 35.0 41.0 32.0 41.0 20 36.97172452607566 39.0 35.0 41.0 32.0 41.0 21 36.784513876687534 38.0 35.0 41.0 31.0 41.0 22 36.74682705314838 38.0 35.0 41.0 31.0 41.0 23 36.68382450622019 38.0 35.0 40.0 31.0 41.0 24 36.57852766695378 38.0 35.0 40.0 31.0 41.0 25 36.471950935564 38.0 35.0 40.0 31.0 41.0 26 36.36571417551949 38.0 35.0 40.0 31.0 41.0 27 36.265005520963236 38.0 35.0 40.0 30.0 41.0 28 36.31018099903008 38.0 35.0 40.0 30.0 41.0 29 36.32462978120416 38.0 35.0 40.0 30.0 41.0 30 36.34460024083685 38.0 35.0 40.0 30.0 41.0 31 36.274861118848555 38.0 35.0 40.0 30.0 41.0 32 36.176815097013254 38.0 35.0 40.0 30.0 41.0 33 36.07219962888842 38.0 35.0 40.0 30.0 41.0 34 35.96507651497945 38.0 35.0 40.0 30.0 41.0 35 35.80948820028026 38.0 35.0 40.0 29.0 41.0 36 35.723047628842714 38.0 35.0 40.0 29.0 41.0 37 35.68454587399062 38.0 35.0 40.0 29.0 41.0 38 35.60842229012126 38.0 34.0 40.0 28.0 41.0 39 35.545091199456046 38.0 34.0 40.0 28.0 41.0 40 35.46264814822751 38.0 34.0 40.0 27.0 41.0 41 35.39564450996273 38.0 34.0 40.0 27.0 41.0 42 35.36021892440494 38.0 34.0 40.0 27.0 41.0 43 35.31355857149183 38.0 34.0 40.0 27.0 41.0 44 35.19759405992924 37.0 34.0 40.0 27.0 41.0 45 35.104236214376215 37.0 34.0 40.0 27.0 41.0 46 35.08269874396301 37.0 34.0 40.0 27.0 41.0 47 35.03150448747891 37.0 34.0 40.0 27.0 41.0 48 34.88692381642119 37.0 34.0 40.0 26.0 41.0 49 34.82479476729819 37.0 34.0 40.0 26.0 41.0 50 34.72930852970964 37.0 34.0 40.0 26.0 41.0 51 34.29891409152657 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 2.0 12 7.0 13 3.0 14 14.0 15 37.0 16 99.0 17 236.0 18 520.0 19 1017.0 20 1840.0 21 2961.0 22 4677.0 23 6788.0 24 9476.0 25 13822.0 26 18437.0 27 22201.0 28 25243.0 29 29235.0 30 34850.0 31 42565.0 32 53547.0 33 68780.0 34 113574.0 35 164760.0 36 102909.0 37 132403.0 38 200867.0 39 349146.0 40 97.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.833349760520186 23.60779591434436 28.64458567063633 12.91426865449912 2 31.231296219318654 25.805753515060875 29.21825160450762 13.74469866111285 3 29.631288219992886 25.61405538676026 30.67320040168043 14.081455991566424 4 26.067945701719424 28.574305879932975 30.16381476418416 15.193933654163436 5 24.150393038301058 32.51904482336489 28.411462462449595 14.919099675884462 6 22.302477362622295 41.192242368143255 26.14886745260042 10.356412816634027 7 88.17535379160898 3.812607223105481 6.27325696834124 1.738782016944286 8 88.41776193149434 3.1730896967255617 6.249473258682483 2.1596751130976104 9 83.2081296005051 5.639881781392711 8.190166828795858 2.96182178930633 10 42.70368640357455 31.93023730856971 14.106525307152683 11.259550980703056 11 35.42165731745467 24.118395735216602 25.17173552514859 15.288211422180131 12 34.45252471577396 22.49538967429888 26.777314483493537 16.274771126433627 13 24.173462522444535 31.584552159175157 27.44718659427277 16.79479872410754 14 18.61228839283546 34.11269621560468 29.586220589978847 17.68879480158101 15 17.845710147287587 26.473697216948857 39.18576862807278 16.49482400769078 16 21.127576389989986 24.45258185381518 37.398205008435006 17.021636747759832 17 21.41119534210688 24.12368100402966 28.450102062826133 26.01502159103733 18 22.70772891999103 24.932255709875882 32.96600715082586 19.394008219307228 19 26.929658785902333 26.681608264446282 27.643812878628804 18.744920071022587 20 28.63801479589577 26.463626637183435 27.196064903101025 17.702293663819763 21 24.158606631726755 26.911588880365798 30.544211273621226 18.385593214286224 22 24.00683370973018 24.716559604261924 29.07112114836035 22.20548553764754 23 21.36634197974742 28.165911730297015 28.505311695157122 21.962434594798438 24 20.87074089469602 25.470853170947024 34.65565045231902 19.00275548203794 25 20.279719280803477 27.501039198124726 31.773107695208548 20.44613382586325 26 19.566779371452977 31.93823663434082 28.310542397140814 20.18444159706539 27 19.023396599429475 31.766108285158822 30.194097926031947 19.016397189379752 28 18.10947363007975 29.28124629495514 33.762582868015414 18.8466972069497 29 19.071749666813798 26.012664646836907 34.03955952284022 20.876026163509074 30 20.716968141256665 29.07147826111799 30.70791176172294 19.503641835902403 31 24.860190355384333 28.132843088939648 27.802513788123573 19.20445276755245 32 26.114441782764025 27.20106448170797 27.86029463230956 18.82419910321844 33 24.983179989115204 27.841081965948582 26.967298470557484 20.20843957437873 34 20.92945023205187 27.959286288727093 28.94270340071337 22.168560078507667 35 20.21922437965943 28.11905853649478 30.555567459314144 21.106149624531646 36 26.186864250013215 26.647039749506828 28.242048170225655 18.924047830254306 37 20.92359358282659 30.276019592634334 29.753849318414588 19.046537506124483 38 21.198070448347924 30.58842183301693 27.021436764615554 21.19207095401959 39 20.210225138166926 29.48087232647534 29.353097381792104 20.955805153565628 40 23.14754899229922 26.801526728461454 28.45638724736058 21.59453703187874 41 19.08560564181019 26.338351481803677 29.93240569723409 24.64363717915204 42 21.84687290642646 26.619327799514043 28.116701592294362 23.417097701765137 43 21.47083317263259 26.456912917339825 29.108332297706337 22.963921612321247 44 19.982315776241716 29.158328083775796 28.802500932064294 22.05685520791819 45 19.130387581618123 31.946307382663463 26.97765474052901 21.945650295189406 46 21.732025443569754 30.648273931197227 27.62417167695866 19.99552894827436 47 20.807889049351555 27.994640451733353 29.018696995538946 22.178773503376146 48 21.41369513141035 26.399774876117583 31.352143176503695 20.83438681596837 49 21.511972562312607 26.05158993741956 31.026099228779287 21.410338271488545 50 19.93617680795476 30.612134120124164 28.97898605688949 20.47270301503159 51 19.587706179050624 30.455147351866056 27.541178672083355 22.415967796999965 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 689.0 1 1391.0 2 2093.0 3 6175.5 4 10258.0 5 7634.0 6 5010.0 7 4934.5 8 4859.0 9 5166.5 10 5474.0 11 5647.0 12 5820.0 13 5900.5 14 5981.0 15 5812.0 16 5643.0 17 5455.0 18 5267.0 19 5455.0 20 5643.0 21 5953.0 22 6263.0 23 7126.5 24 7990.0 25 9387.0 26 13678.0 27 16572.0 28 19427.5 29 22283.0 30 25964.0 31 29645.0 32 34328.0 33 39011.0 34 43625.5 35 48240.0 36 51911.0 37 55582.0 38 62533.5 39 69485.0 40 81403.5 41 93322.0 42 105456.0 43 117590.0 44 120130.0 45 122670.0 46 122214.0 47 121758.0 48 117040.5 49 112323.0 50 105311.5 51 98300.0 52 91718.0 53 85136.0 54 76142.0 55 67148.0 56 59939.0 57 52730.0 58 48568.5 59 44407.0 60 40306.5 61 36206.0 62 31552.5 63 26899.0 64 23200.0 65 19501.0 66 16869.0 67 14237.0 68 11943.5 69 9650.0 70 7843.0 71 6036.0 72 5104.0 73 4172.0 74 3380.0 75 1973.0 76 1358.0 77 1080.0 78 802.0 79 590.5 80 379.0 81 288.0 82 197.0 83 127.0 84 57.0 85 45.5 86 34.0 87 21.5 88 9.0 89 8.0 90 7.0 91 7.0 92 7.0 93 5.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1400118.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.547427562148048 #Duplication Level Percentage of deduplicated Percentage of total 1 76.64789293371703 15.7491702784683 2 6.988345774847462 2.871850571758433 3 2.4283046472055916 1.4968624151185308 4 1.271307751404631 1.044884157247359 5 0.892825522465414 0.917263387424754 6 0.6688160329018513 0.8245469393072408 7 0.5317583841445089 0.7648386815141935 8 0.4811403935629293 0.7908957907166154 9 0.4230240213884175 0.7822849892874368 >10 7.186813444866735 36.44840233515829 >50 2.2689518012817764 32.19428911023876 >100 0.2094091297239413 5.494062311107288 >500 7.050812448615223E-4 0.10431076179039336 >1k 3.5254062243076116E-4 0.11742204504321364 >5k 3.5254062243076116E-4 0.39891622581923347 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5507 0.39332399126359346 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1621 0.11577595602656349 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.14225515277998E-5 0.0 0.0 0.03321148646042691 0.0 2 7.14225515277998E-5 0.0 0.0 0.11534742071739668 0.0 3 7.14225515277998E-5 0.0 0.0 0.18512725356005708 0.0 4 7.14225515277998E-5 0.0 0.0 0.3516132211713584 0.0 5 7.14225515277998E-5 0.0 0.0 0.6281613406869992 0.0 6 7.14225515277998E-5 0.0 0.0 0.9852026757744704 0.0 7 7.14225515277998E-5 0.0 0.0 1.1561168415804954 0.0 8 7.14225515277998E-5 0.0 0.0 1.591508715693963 0.0 9 7.14225515277998E-5 0.0 0.0 1.7302113107609502 0.0 10 7.14225515277998E-5 0.0 0.0 1.997831611335616 0.0 11 7.14225515277998E-5 0.0 0.0 2.327089573878773 0.0 12 7.14225515277998E-5 0.0 0.0 2.6077802013830262 0.0 13 7.14225515277998E-5 0.0 0.0 2.7300556095986197 0.0 14 7.14225515277998E-5 0.0 0.0 2.7814798466986352 0.0 15 7.14225515277998E-5 0.0 0.0 2.8587590474517146 0.0 16 7.14225515277998E-5 0.0 0.0 3.03874387730177 0.0 17 7.14225515277998E-5 0.0 0.0 3.2280850614019676 0.0 18 7.14225515277998E-5 0.0 0.0 3.4592798606974555 0.0 19 7.14225515277998E-5 0.0 0.0 3.593982792878886 0.0 20 7.14225515277998E-5 0.0 0.0 3.734113838976429 0.0 21 7.14225515277998E-5 0.0 0.0 3.9345255185634356 0.0 22 7.14225515277998E-5 0.0 0.0 4.147721834873918 0.0 23 7.14225515277998E-5 0.0 0.0 4.364346433657735 0.0 24 7.14225515277998E-5 0.0 0.0 4.536831895597371 0.0 25 7.14225515277998E-5 0.0 0.0 4.687676324424085 0.0 26 7.14225515277998E-5 0.0 0.0 4.834449667813713 0.0 27 7.14225515277998E-5 0.0 0.0 4.98807957615001 0.0 28 7.14225515277998E-5 0.0 0.0 5.143066512965336 0.0 29 7.14225515277998E-5 0.0 0.0 5.328836569489143 0.0 30 7.14225515277998E-5 0.0 0.0 5.546675351648933 0.0 31 7.14225515277998E-5 0.0 0.0 5.735373732785379 0.0 32 7.14225515277998E-5 0.0 0.0 5.919358225520992 0.0 33 7.14225515277998E-5 0.0 0.0 6.107270958590633 0.0 34 7.14225515277998E-5 0.0 0.0 6.3004689604733315 0.0 35 7.14225515277998E-5 0.0 0.0 6.533806436314653 0.0 36 7.14225515277998E-5 0.0 0.0 6.727932931367214 0.0 37 7.14225515277998E-5 0.0 0.0 6.932201428736721 0.0 38 7.14225515277998E-5 0.0 0.0 7.1594679876981795 0.0 39 7.14225515277998E-5 0.0 0.0 7.479583863645779 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGACG 35 1.2121745E-7 45.000004 1 GTAATCG 35 1.2121745E-7 45.000004 1 GTTACGC 20 7.0338143E-4 45.0 45 CGGGTAT 100 0.0 42.750004 6 TCGATAG 125 0.0 41.4 1 CACGACG 150 0.0 40.500004 26 TACGTAG 100 0.0 40.500004 1 CATACGA 295 0.0 40.42373 18 CGTTTTT 3870 0.0 40.17442 1 GGGCGAT 2120 0.0 40.117924 7 TTACGCG 45 1.9288564E-8 40.0 1 ATCGAAG 85 0.0 39.705883 1 TAATCGT 125 0.0 39.600002 21 CACGACC 120 0.0 39.375004 27 TACTCGC 40 3.4589357E-7 39.375 45 CCAACGG 80 0.0 39.375 2 CGGTCTA 155 0.0 39.19355 31 AGGGCGA 1310 0.0 39.160305 6 ACGTAGG 230 0.0 39.130436 2 TACGGGA 490 0.0 39.030613 4 >>END_MODULE