##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547603_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2295113 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.305883414019267 31.0 31.0 33.0 30.0 34.0 2 31.70000300638792 31.0 31.0 34.0 30.0 34.0 3 31.77265433118108 31.0 31.0 34.0 30.0 34.0 4 35.55979945214027 37.0 35.0 37.0 33.0 37.0 5 35.477062785143914 37.0 35.0 37.0 33.0 37.0 6 35.5226679470684 37.0 35.0 37.0 33.0 37.0 7 35.91060222307137 37.0 35.0 37.0 35.0 37.0 8 35.952678582710305 37.0 35.0 37.0 35.0 37.0 9 37.80296307850637 39.0 38.0 39.0 35.0 39.0 10 37.15270097812177 39.0 37.0 39.0 33.0 39.0 11 36.80263716862743 39.0 35.0 39.0 32.0 39.0 12 35.78414047587199 37.0 35.0 39.0 32.0 39.0 13 35.3388634895101 37.0 35.0 39.0 30.0 39.0 14 36.24737518370555 38.0 35.0 41.0 31.0 41.0 15 36.60876131153455 38.0 35.0 41.0 31.0 41.0 16 36.79749319532415 38.0 35.0 41.0 32.0 41.0 17 36.71481839891979 38.0 35.0 41.0 32.0 41.0 18 36.61090107545903 38.0 35.0 40.0 32.0 41.0 19 36.50635241053491 37.0 35.0 40.0 31.0 41.0 20 36.30268357157142 36.0 35.0 40.0 31.0 41.0 21 36.0849322015953 36.0 35.0 40.0 31.0 41.0 22 35.97804857538605 36.0 35.0 40.0 31.0 41.0 23 35.98556323806279 36.0 35.0 40.0 31.0 41.0 24 35.90769081958056 36.0 35.0 40.0 31.0 41.0 25 35.8057886474435 36.0 34.0 40.0 31.0 41.0 26 35.674010386416704 36.0 34.0 40.0 30.0 41.0 27 35.61397238393055 35.0 34.0 40.0 30.0 41.0 28 35.64556952097784 36.0 34.0 40.0 30.0 41.0 29 35.724533388987815 36.0 35.0 40.0 30.0 41.0 30 35.72890049422403 36.0 35.0 40.0 30.0 41.0 31 35.56625926479437 36.0 34.0 40.0 30.0 41.0 32 35.3397675844283 36.0 34.0 40.0 29.0 41.0 33 35.153842098406486 36.0 34.0 40.0 29.0 41.0 34 35.05131119905643 36.0 34.0 40.0 28.0 41.0 35 34.87110743566875 36.0 34.0 40.0 27.0 41.0 36 34.699084097384315 35.0 34.0 40.0 25.0 41.0 37 34.633059025851885 35.0 34.0 40.0 25.0 41.0 38 34.59173818456869 35.0 34.0 40.0 25.0 41.0 39 34.574899362253625 36.0 34.0 40.0 25.0 41.0 40 34.458842331510475 36.0 34.0 40.0 24.0 41.0 41 34.41208297804945 36.0 34.0 40.0 24.0 41.0 42 34.37078087222721 36.0 34.0 40.0 24.0 41.0 43 34.31128489098358 35.0 33.0 40.0 24.0 41.0 44 34.175890685992364 35.0 34.0 40.0 23.0 41.0 45 34.10227557423099 35.0 33.0 40.0 23.0 41.0 46 34.085342638902745 35.0 34.0 40.0 23.0 41.0 47 34.072450463223376 35.0 33.0 40.0 23.0 41.0 48 33.97698152552837 35.0 33.0 40.0 23.0 41.0 49 33.98007244087764 35.0 33.0 40.0 24.0 41.0 50 33.857259315772254 35.0 33.0 40.0 24.0 41.0 51 33.42935750875883 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 0.0 12 3.0 13 1.0 14 17.0 15 43.0 16 152.0 17 423.0 18 1080.0 19 2029.0 20 3705.0 21 6043.0 22 9281.0 23 13822.0 24 20230.0 25 30046.0 26 40421.0 27 47243.0 28 50787.0 29 55250.0 30 64005.0 31 77169.0 32 95119.0 33 125168.0 34 228972.0 35 389348.0 36 142923.0 37 170103.0 38 255452.0 39 466100.0 40 175.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.71504540299323 24.260461249620388 29.625905129725638 15.398588217660741 2 30.018260538805713 26.05897835967118 30.68258512761681 13.240175973906295 3 27.67114298947372 24.841565535117443 34.0176714610566 13.469620014352234 4 23.996247679308162 27.480694850318915 33.71481055616869 14.808246914204224 5 22.172154486511122 31.76196553285176 32.521100268265656 13.54477971237146 6 20.717629153771515 39.92644370887185 29.080223936686338 10.275703200670295 7 86.3984910546888 3.7195989914222087 8.451435724515525 1.4304742293734556 8 87.59067636321176 2.6171260412885986 7.580193219244542 2.2120043762551127 9 83.97285885270136 4.248984690514149 9.601183035432243 2.1769734213522383 10 50.691447436357166 23.35013570137941 14.937913732352175 11.020503129911251 11 45.63505152033909 20.425617387902033 22.214766767475066 11.724564324283815 12 41.92281600078079 20.45280559170725 24.29139654561671 13.332981861895254 13 20.341569238638797 41.00726195180804 25.246164350077756 13.405004459475418 14 14.325482013303919 43.80368199735699 27.8331393704798 14.037696618859288 15 12.697849735503219 24.57138275980311 50.124155106959876 12.606612397733793 16 14.948240021297426 20.01783790166323 49.06621155472519 15.967710522314151 17 15.458715976076123 20.9643272466323 29.07355759825333 34.50339917903824 18 20.407666202056284 24.181467317731197 36.65667006373978 18.75419641647274 19 27.605699588647703 25.190306533926655 28.60181611972918 18.602177757696463 20 30.668860313195907 23.920042281142585 27.546966097094128 17.864131308567377 21 20.855748714769167 28.3434846127402 31.081345450093306 19.71942122239733 22 21.41288903857893 23.40939204300616 29.265792141824825 25.911926776590082 23 17.54641274743335 29.99725939419976 27.529537761321553 24.92679009704533 24 19.542087905911387 23.48978024175716 40.55199025058897 16.416141601742485 25 15.815212584304128 25.24224297452892 37.73888257353777 21.203661867629176 26 15.570823745933208 36.08214497499687 29.313545781841675 19.03348549722824 27 16.596132739433745 36.4995100459106 30.867543341003252 16.03681387365241 28 13.765466014091682 30.271189261705196 40.70100252144448 15.262342202758644 29 14.035430935208854 25.221416113280696 40.22695178843046 20.516201163079987 30 16.12521910685879 32.95576296243366 33.697556503753844 17.221461426953706 31 27.482916963129924 27.869216025529024 26.818853799355413 17.829013211985643 32 27.69780834320576 28.86293616044177 28.07604680031005 15.363208696042415 33 25.986040774462953 29.654095462837777 25.454258679202287 18.90560508349698 34 17.673683169412573 30.36421300389131 28.200964396959975 23.76113942973614 35 17.4121709911451 27.696501218022817 32.11323364034799 22.778094150484094 36 27.713232420364488 24.785533435608617 29.547216193712465 17.95401795031443 37 17.82413327796932 32.5904650446405 32.2385433745528 17.346858302837376 38 17.88277962784403 33.19095835368454 25.67359428490013 23.25266773357129 39 18.639910104644088 32.326556470204295 30.115728506613838 18.91780491853778 40 22.840966871783657 27.89666565437083 26.905777624021127 22.35658984982439 41 15.817478267954563 25.146866407013512 30.699752038352795 28.33590328667913 42 21.30579191525646 25.194881472066953 27.176831816124086 26.322494796552505 43 21.820668524817734 25.033974362046663 27.84660275986411 25.298754353271498 44 17.423542980236704 31.547161294454785 29.963622706158695 21.06567301914982 45 16.552431187484014 38.23633084732647 24.540839601361675 20.67039836382784 46 21.624381893179116 33.594860035213955 26.31508775384916 18.465670317757773 47 20.053217423281556 29.200828020232557 27.451240962863267 23.294713593622625 48 22.04802116497096 24.788147685974504 32.7810438963136 20.382787252740933 49 20.335556462797257 23.26669754386821 34.25251828559204 22.145227707742496 50 18.45307834516209 32.63643228024067 29.360123009193885 19.55036636540336 51 17.217235055528857 33.797813005285576 26.102331344905462 22.882620594280105 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1275.0 1 2190.0 2 3105.0 3 16621.5 4 30138.0 5 21111.5 6 12085.0 7 12361.5 8 12638.0 9 13788.5 10 14939.0 11 15483.5 12 16028.0 13 15504.0 14 14980.0 15 13826.5 16 12673.0 17 11941.5 18 11210.0 19 10484.5 20 9759.0 21 10627.0 22 11495.0 23 11390.0 24 11285.0 25 13198.0 26 16587.5 27 18064.0 28 21368.5 29 24673.0 30 31627.5 31 38582.0 32 46600.5 33 54619.0 34 56096.5 35 57574.0 36 67722.5 37 77871.0 38 93482.0 39 109093.0 40 143575.5 41 178058.0 42 219554.0 43 261050.0 44 268101.0 45 275152.0 46 268167.0 47 261182.0 48 229138.0 49 197094.0 50 175368.0 51 153642.0 52 137375.5 53 121109.0 54 104923.5 55 88738.0 56 74478.0 57 60218.0 58 53043.0 59 45868.0 60 39504.0 61 33140.0 62 28519.5 63 23899.0 64 19911.5 65 15924.0 66 12421.5 67 8919.0 68 7301.0 69 5683.0 70 4479.0 71 3275.0 72 2876.5 73 2478.0 74 1869.0 75 892.0 76 524.0 77 401.5 78 279.0 79 223.5 80 168.0 81 179.0 82 190.0 83 111.5 84 33.0 85 18.5 86 4.0 87 6.0 88 8.0 89 8.0 90 8.0 91 6.5 92 5.0 93 3.5 94 2.0 95 4.0 96 6.0 97 3.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2295113.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.556694161403986 #Duplication Level Percentage of deduplicated Percentage of total 1 77.9914828950036 12.91281129486945 2 9.458792294490687 3.1321266231225393 3 3.522716996926646 1.7497364380588194 4 1.788904020015193 1.1847334697399066 5 1.0176869171302119 0.8424765519493501 6 0.6319504322767757 0.627780601942417 7 0.4319710971581935 0.5006409339550035 8 0.31866317431902086 0.42208069741617543 9 0.24773050433524196 0.3691438375256069 >10 1.9248374305268707 7.33840566212632 >50 0.9018534845839443 11.039605786055699 >100 1.7425988242358585 55.92325926519671 >500 0.017076454562223137 1.8646019464380066 >1k 0.003201835230416838 0.812494290155606 >5k 2.668196025347365E-4 0.37532359118975794 >10k+ 2.668196025347365E-4 0.9047790102586433 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20481 0.8923743623952285 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 8496 0.37017785180947516 No Hit GAGCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCT 2792 0.12164978369256765 No Hit AAGCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCT 2388 0.10404716456226773 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06426698816136722 0.0 2 0.0 0.0 0.0 0.26517212877971585 0.0 3 0.0 0.0 0.0 0.39388038846017603 0.0 4 0.0 0.0 0.0 0.8245781362399149 0.0 5 0.0 0.0 0.0 1.3264706356506193 0.0 6 0.0 0.0 0.0 1.9360266792964007 0.0 7 0.0 0.0 0.0 2.1971031491695614 0.0 8 0.0 0.0 0.0 2.8977222472270427 0.0 9 0.0 0.0 0.0 3.0764934014142225 0.0 10 0.0 0.0 0.0 3.4560389837014562 0.0 11 0.0 0.0 0.0 3.9888667791084798 0.0 12 0.0 0.0 0.0 4.4010469201298585 0.0 13 0.0 0.0 0.0 4.568010376831119 0.0 14 0.0 0.0 0.0 4.626438872508674 0.0 15 0.0 0.0 0.0 4.730268182873784 0.0 16 0.0 0.0 0.0 4.983981180883033 0.0 17 0.0 0.0 0.0 5.259043890213684 0.0 18 0.0 0.0 0.0 5.648262198854697 0.0 19 0.0 0.0 0.0 5.828558332421976 0.0 20 0.0 0.0 0.0 6.014997954349089 0.0 21 0.0 0.0 0.0 6.288884251015092 0.0 22 0.0 0.0 0.0 6.551529271107785 0.0 23 0.0 0.0 0.0 6.845109587196796 0.0 24 0.0 0.0 0.0 7.059695971396615 0.0 25 0.0 0.0 0.0 7.238815692299246 0.0 26 0.0 0.0 0.0 7.421421080356392 0.0 27 0.0 0.0 0.0 7.5755311394253795 0.0 28 0.0 0.0 0.0 7.746110975799449 0.0 29 0.0 0.0 0.0 7.938868369444119 0.0 30 0.0 0.0 0.0 8.176024448469422 0.0 31 0.0 0.0 0.0 8.414531223517098 0.0 32 0.0 0.0 0.0 8.614085668113074 0.0 33 0.0 0.0 0.0 8.818389334207074 0.0 34 4.3570839431435405E-5 0.0 0.0 9.03349856848007 0.0 35 4.3570839431435405E-5 0.0 0.0 9.309171269562762 0.0 36 4.3570839431435405E-5 0.0 0.0 9.55464937891947 0.0 37 4.3570839431435405E-5 0.0 0.0 9.786184819658118 0.0 38 4.3570839431435405E-5 0.0 0.0 10.002252612398605 0.0 39 4.3570839431435405E-5 0.0 0.0 10.224768889374946 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGGT 25 3.892025E-5 45.000004 16 CGAACCG 25 3.892025E-5 45.000004 29 CATTGCG 25 3.892025E-5 45.000004 1 TTCACGC 25 3.892025E-5 45.000004 41 TCGATTG 25 3.892025E-5 45.000004 1 CACGTTA 25 3.892025E-5 45.000004 30 ATCGGTC 25 3.892025E-5 45.000004 22 CTTAACG 35 1.2126293E-7 45.0 1 GTCGCGC 20 7.034758E-4 45.0 37 TCGTTAG 80 0.0 45.0 1 ACGCCCG 35 1.2126293E-7 45.0 29 CGAGTCA 40 6.8193913E-9 45.0 21 CGACGGA 40 6.8193913E-9 45.0 29 CGGTTTA 40 6.8193913E-9 45.0 11 CTATACG 45 3.8562575E-10 45.0 1 CGCGCCA 35 1.2126293E-7 45.0 26 TATATCG 40 6.8193913E-9 45.0 15 CGACATA 20 7.034758E-4 45.0 29 ATCGTAG 45 3.8562575E-10 45.0 1 ATATCGT 35 1.2126293E-7 45.0 16 >>END_MODULE