##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547602_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2737480 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.40223161447755 31.0 31.0 33.0 30.0 34.0 2 31.830932463433523 31.0 31.0 34.0 30.0 34.0 3 31.95892280491547 31.0 31.0 34.0 30.0 34.0 4 35.74317693645251 37.0 35.0 37.0 35.0 37.0 5 35.67472200710142 37.0 35.0 37.0 33.0 37.0 6 35.71959685550214 37.0 35.0 37.0 33.0 37.0 7 35.997621535134506 37.0 35.0 37.0 35.0 37.0 8 36.03123748849307 37.0 35.0 37.0 35.0 37.0 9 37.869803980303054 39.0 38.0 39.0 35.0 39.0 10 37.31666678843316 39.0 37.0 39.0 34.0 39.0 11 37.000163654163686 39.0 37.0 39.0 33.0 39.0 12 36.638400280549995 39.0 35.0 39.0 33.0 39.0 13 36.54360470213481 39.0 35.0 39.0 32.0 39.0 14 37.63318270818417 40.0 36.0 41.0 33.0 41.0 15 37.79196742989903 40.0 36.0 41.0 33.0 41.0 16 37.84719303885325 40.0 36.0 41.0 33.0 41.0 17 37.75188786767392 40.0 36.0 41.0 33.0 41.0 18 37.6467605242778 39.0 36.0 41.0 33.0 41.0 19 37.60744407265076 39.0 36.0 41.0 33.0 41.0 20 37.48266909712582 39.0 35.0 41.0 33.0 41.0 21 37.33175438724666 39.0 35.0 41.0 32.0 41.0 22 37.28523021172757 39.0 35.0 41.0 32.0 41.0 23 37.20332787819454 39.0 35.0 41.0 32.0 41.0 24 37.119118678492626 39.0 35.0 41.0 32.0 41.0 25 37.027705773192864 39.0 35.0 41.0 32.0 41.0 26 36.926949968584246 39.0 35.0 41.0 32.0 41.0 27 36.84941186784926 38.0 35.0 40.0 31.0 41.0 28 36.86161542732732 39.0 35.0 40.0 31.0 41.0 29 36.87356693016935 39.0 35.0 41.0 31.0 41.0 30 36.885853777927146 39.0 35.0 41.0 31.0 41.0 31 36.821035404824876 39.0 35.0 41.0 31.0 41.0 32 36.71228502126043 39.0 35.0 41.0 31.0 41.0 33 36.58560573958531 39.0 35.0 41.0 31.0 41.0 34 36.475773338983295 39.0 35.0 41.0 30.0 41.0 35 36.28597834504727 39.0 35.0 41.0 30.0 41.0 36 36.20821595043617 39.0 35.0 41.0 30.0 41.0 37 36.1593249996347 39.0 35.0 41.0 30.0 41.0 38 36.08162032234026 38.0 35.0 41.0 30.0 41.0 39 36.007002425588496 38.0 35.0 41.0 29.0 41.0 40 35.94532197495507 38.0 35.0 41.0 29.0 41.0 41 35.86720195216038 38.0 35.0 40.0 29.0 41.0 42 35.852187047941904 38.0 35.0 40.0 29.0 41.0 43 35.818510820170374 38.0 35.0 40.0 29.0 41.0 44 35.698638894165434 38.0 35.0 40.0 28.0 41.0 45 35.600771512485935 38.0 35.0 40.0 28.0 41.0 46 35.567432456127534 38.0 34.0 40.0 28.0 41.0 47 35.51791026783757 38.0 34.0 40.0 28.0 41.0 48 35.386452503762584 38.0 34.0 40.0 27.0 41.0 49 35.31219223519441 38.0 34.0 40.0 27.0 41.0 50 35.233859242807256 38.0 34.0 40.0 27.0 41.0 51 34.801355261043 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 5.0 12 6.0 13 2.0 14 15.0 15 19.0 16 90.0 17 268.0 18 613.0 19 1279.0 20 2284.0 21 3989.0 22 6465.0 23 10089.0 24 15679.0 25 23290.0 26 32270.0 27 38845.0 28 42221.0 29 47621.0 30 56568.0 31 70514.0 32 89615.0 33 118444.0 34 193089.0 35 281622.0 36 208236.0 37 276467.0 38 437418.0 39 780230.0 40 225.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.85619620965267 23.768758127913266 28.81599134970849 15.559054312725573 2 30.651328959480985 25.625867586247203 30.898892411999356 12.823911042272455 3 27.896751757090467 26.244794482516763 32.36922278884229 13.489230971550478 4 25.234558791297108 28.70143343513012 32.06956763154434 13.994440142028436 5 22.98584829843506 32.70000146119789 30.439491795373847 13.874658444993205 6 22.31545070648918 40.6085158613031 26.688706401507957 10.387327030699769 7 89.85373409120797 2.7725134064906407 6.091770533483349 1.281981968818037 8 90.62086298347384 2.0778599295702618 5.823311951137542 1.4779651358183439 9 85.3111986206292 5.186448850767859 7.300838727588878 2.2015138010140713 10 41.302438739278465 36.41962681005889 12.65700571328375 9.620928737378904 11 28.99228487514064 24.320981340502946 29.656289726317635 17.03044405803878 12 30.219070093662786 22.664348232681153 29.05398395604717 18.062597717608895 13 23.060113681195844 28.716849072869937 29.78644592837208 18.436591317562137 14 18.482326811520082 31.16464777824861 30.574141180940135 19.778884229291176 15 17.143796484357875 27.70632114207227 37.2414775633064 17.908404810263452 16 21.47643087803381 25.323509212852695 35.613849233601705 17.586210675511786 17 21.20143343513012 25.31543609451028 29.828236188026946 23.654894282332656 18 21.642386428393998 25.878764411064193 32.91512632055759 19.56372283998422 19 24.96376229232725 27.228399842190626 28.385157151833074 19.422680713649047 20 26.230876572614232 26.8598126744305 28.775698817890905 18.133611935064366 21 23.809489019097857 27.039357365167966 30.39803030524424 18.75312331048994 22 23.36802460657247 23.821909201163113 30.422468839955 22.387597352309424 23 20.324933880795477 27.693462600640007 30.388276809328286 21.593326709236234 24 20.214065490889432 26.46514312433333 34.03772812952058 19.28306325525666 25 20.238394435758437 28.325357628183585 30.94532197495507 20.490925961102914 26 19.76244575302833 31.6521764542572 28.49109399886027 20.0942837938542 27 19.017052179376652 30.933157502520565 30.691840670982074 19.35794964712071 28 18.590601575171327 28.29142130718763 33.94917953738475 19.168797580256296 29 18.84693221502988 25.90773265923404 34.09946374037436 21.14587138536172 30 20.39262387305113 28.52791618568903 31.55135379984511 19.52810614141473 31 24.102970615310433 27.104928620483072 28.853690255271268 19.938410508935224 32 24.577238920467 27.333934859798063 28.965179654280583 19.12364656545436 33 23.747497698613323 27.552712713882844 28.19311921913585 20.50667036836799 34 20.989596271022982 26.977366044683432 30.23675058813215 21.796287096161432 35 21.132720604351444 27.2801993073922 30.91923959261803 20.667840495638323 36 24.618554290807605 26.893822055320953 28.92470447272674 19.562919181144704 37 20.980756023788302 29.582426172976607 30.058959334862724 19.377858468372374 38 21.295790288878823 29.694901880561687 28.355787074243466 20.653520756316027 39 20.768809269839412 29.805039671522714 29.27330975934071 20.152841299297165 40 23.261978169703525 27.465296550111784 28.84872218244517 20.424003097739526 41 19.372744275757267 27.36242821865365 30.072219705714744 23.192607799874338 42 21.461745839239008 27.537077896459515 28.199694609640986 22.801481654660492 43 21.45458596957786 27.611708578692813 28.7029311629674 22.230774288761925 44 20.5143781872379 29.34677148326198 29.19257857591654 20.946271753583588 45 19.579138477724037 30.623383549834156 28.25244385347108 21.545034118970733 46 21.114638280462323 29.97073951225214 28.630236567938393 20.284385639347136 47 20.785320805996758 27.79413913526309 29.749915981121323 21.670624077618832 48 21.38945307362976 27.011777254993646 30.973888393705156 20.624881277671435 49 21.087094700235255 26.552267048526385 31.0822362172509 21.27840203398746 50 19.875140640296916 29.526389233893944 29.810044274296065 20.78842585151307 51 19.65840846325818 29.503558016862225 28.95991934187647 21.878114178003127 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1251.0 1 2441.0 2 3631.0 3 16513.5 4 29396.0 5 20655.0 6 11914.0 7 11728.0 8 11542.0 9 12052.5 10 12563.0 11 12635.0 12 12707.0 13 12518.5 14 12330.0 15 11970.5 16 11611.0 17 11391.0 18 11171.0 19 10828.5 20 10486.0 21 11457.0 22 12428.0 23 14253.0 24 16078.0 25 18458.5 26 27494.5 27 34150.0 28 40830.5 29 47511.0 30 55646.0 31 63781.0 32 70951.0 33 78121.0 34 86656.5 35 95192.0 36 106138.5 37 117085.0 38 130772.0 39 144459.0 40 165638.0 41 186817.0 42 198570.5 43 210324.0 44 214413.5 45 218503.0 46 215894.5 47 213286.0 48 215566.5 49 217847.0 50 214253.5 51 210660.0 52 198799.0 53 186938.0 54 164001.0 55 141064.0 56 125768.5 57 110473.0 58 98012.0 59 85551.0 60 75559.5 61 65568.0 62 56069.5 63 46571.0 64 38901.0 65 31231.0 66 25360.5 67 19490.0 68 16691.5 69 13893.0 70 11372.0 71 8851.0 72 7000.5 73 5150.0 74 4242.5 75 2680.0 76 2025.0 77 1509.0 78 993.0 79 702.5 80 412.0 81 282.0 82 152.0 83 109.0 84 66.0 85 43.5 86 21.0 87 14.5 88 8.0 89 5.5 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2737480.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.057162539737334 #Duplication Level Percentage of deduplicated Percentage of total 1 76.47213092415541 13.808696978575483 2 7.298883553636001 2.6359425337324183 3 2.5356840846767428 1.373617789992991 4 1.4610259960512513 1.0552793554191635 5 0.8767867950205654 0.7916140835190856 6 0.6394602467058311 0.6928102567480638 7 0.5211781202612837 0.6587698620798941 8 0.41404183444738113 0.5981136562293902 9 0.36071173811460916 0.5862087436613997 >10 6.17765836880975 28.913006558402927 >50 2.593700308765022 33.32441546537294 >100 0.6452491083150493 14.4248191636104 >500 0.0030784597422249837 0.39204538328646377 >1k 2.0523064948166556E-4 0.09068296180186944 >5k 0.0 0.0 >10k+ 2.0523064948166556E-4 0.6539772075674662 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17647 0.6446439791340941 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.037918085246284906 0.0 2 0.0 0.0 0.0 0.11474056431462513 0.0 3 0.0 0.0 0.0 0.19167263322471761 0.0 4 0.0 0.0 0.0 0.3182854303958385 0.0 5 0.0 0.0 0.0 0.5516752633809197 0.0 6 0.0 0.0 0.0 0.9210295600333153 0.0 7 0.0 0.0 0.0 1.1011221999795433 0.0 8 0.0 0.0 0.0 1.5368879407338136 0.0 9 0.0 0.0 0.0 1.7373277612987126 0.0 10 0.0 0.0 0.0 2.018023875973523 0.0 11 0.0 0.0 0.0 2.325058082616129 0.0 12 0.0 0.0 0.0 2.579964054531905 0.0 13 0.0 0.0 0.0 2.7032160965559564 0.0 14 0.0 0.0 0.0 2.772038517176381 0.0 15 0.0 0.0 0.0 2.840678288060552 0.0 16 0.0 0.0 0.0 2.969044522699709 0.0 17 0.0 0.0 0.0 3.123347019886903 0.0 18 0.0 0.0 0.0 3.2981428174817715 0.0 19 0.0 0.0 0.0 3.423002177184856 0.0 20 0.0 0.0 0.0 3.5453409705276386 0.0 21 0.0 0.0 0.0 3.706620687639727 0.0 22 0.0 0.0 0.0 3.889270423893508 0.0 23 0.0 0.0 0.0 4.078678200388679 0.0 24 0.0 0.0 0.0 4.2228253722401625 0.0 25 0.0 0.0 0.0 4.350497537881555 0.0 26 0.0 0.0 0.0 4.474955068164881 0.0 27 0.0 0.0 0.0 4.609714043572921 0.0 28 0.0 0.0 0.0 4.742829171354677 0.0 29 0.0 0.0 0.0 4.899871414585677 0.0 30 0.0 0.0 0.0 5.1073615149699725 0.0 31 0.0 0.0 0.0 5.2766047605827255 0.0 32 0.0 0.0 0.0 5.438724666481582 0.0 33 0.0 0.0 0.0 5.602707599690226 0.0 34 0.0 0.0 0.0 5.775202010608297 0.0 35 0.0 0.0 0.0 5.978929526425764 0.0 36 0.0 0.0 0.0 6.154784692490904 0.0 37 0.0 0.0 0.0 6.345799786665108 0.0 38 0.0 0.0 0.0 6.543061501819191 0.0 39 0.0 0.0 0.0 6.797017695106448 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTACCG 75 0.0 42.0 1 TAGCACG 70 0.0 41.785717 1 CGTTTTT 9785 0.0 41.78079 1 AGGGCGA 1855 0.0 39.420483 6 CGACGGT 115 0.0 39.130436 28 TAAGGGA 4485 0.0 38.82943 4 TATAGCG 145 0.0 38.793106 1 CGGTAGT 305 0.0 38.360657 12 TCGTCCC 965 0.0 38.238342 38 ACGGGAT 1390 0.0 37.553955 5 GTAGCGT 30 1.1403339E-4 37.500004 34 AGGGATT 5120 0.0 37.441406 6 ATAGGGA 4310 0.0 37.325985 4 CGCGAGG 315 0.0 37.142857 2 CCTCGTC 995 0.0 37.085423 36 GAGGGAT 4820 0.0 36.784233 5 CTCGTCC 1035 0.0 36.739132 37 CGTAAGG 490 0.0 36.734695 2 CGTTAGG 510 0.0 36.61765 2 GGGCGAT 3980 0.0 36.57663 7 >>END_MODULE