##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547601_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2398757 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28089339603803 31.0 31.0 33.0 30.0 34.0 2 31.685071893484835 31.0 31.0 34.0 30.0 34.0 3 31.832115966727766 31.0 31.0 34.0 30.0 34.0 4 35.60236322395307 37.0 35.0 37.0 33.0 37.0 5 35.500455027332904 37.0 35.0 37.0 33.0 37.0 6 35.55027541347456 37.0 35.0 37.0 33.0 37.0 7 35.892732360968616 37.0 35.0 37.0 35.0 37.0 8 35.923125185252196 37.0 35.0 37.0 35.0 37.0 9 37.77000671597832 39.0 38.0 39.0 35.0 39.0 10 37.106272123437265 39.0 37.0 39.0 33.0 39.0 11 36.79350722061468 39.0 35.0 39.0 32.0 39.0 12 36.03636883602633 37.0 35.0 39.0 32.0 39.0 13 35.71184450946886 37.0 35.0 39.0 31.0 39.0 14 36.60220856051697 38.0 35.0 41.0 31.0 41.0 15 36.916568456079546 38.0 35.0 41.0 32.0 41.0 16 37.05949623075618 38.0 35.0 41.0 32.0 41.0 17 36.985873100109764 38.0 35.0 41.0 32.0 41.0 18 36.91724380585445 38.0 35.0 41.0 32.0 41.0 19 36.87001559557721 38.0 35.0 41.0 32.0 41.0 20 36.70502472739006 38.0 35.0 41.0 31.0 41.0 21 36.52655396107234 38.0 35.0 40.0 31.0 41.0 22 36.467563408882185 38.0 35.0 40.0 31.0 41.0 23 36.435476373805265 38.0 35.0 40.0 31.0 41.0 24 36.357326315254106 38.0 35.0 40.0 31.0 41.0 25 36.232534183329115 38.0 35.0 40.0 31.0 41.0 26 36.1231079263135 38.0 35.0 40.0 30.0 41.0 27 36.057385554268315 38.0 35.0 40.0 30.0 41.0 28 36.102295480534295 38.0 35.0 40.0 30.0 41.0 29 36.143533088178586 38.0 35.0 40.0 30.0 41.0 30 36.15777046195175 38.0 35.0 40.0 30.0 41.0 31 36.038024276739996 38.0 35.0 40.0 30.0 41.0 32 35.91332802780774 38.0 35.0 40.0 30.0 41.0 33 35.80550176612304 38.0 35.0 40.0 30.0 41.0 34 35.69964652526288 38.0 35.0 40.0 29.0 41.0 35 35.54645593530316 38.0 34.0 40.0 29.0 41.0 36 35.43557809315408 38.0 34.0 40.0 28.0 41.0 37 35.387726226541496 38.0 34.0 40.0 28.0 41.0 38 35.31629756578094 37.0 34.0 40.0 27.0 41.0 39 35.27248070563213 37.0 34.0 40.0 27.0 41.0 40 35.162529176569365 37.0 34.0 40.0 27.0 41.0 41 35.09940398297952 37.0 34.0 40.0 27.0 41.0 42 35.08253274508422 37.0 34.0 40.0 27.0 41.0 43 35.02945358783737 37.0 34.0 40.0 27.0 41.0 44 34.92011779434099 37.0 34.0 40.0 26.0 41.0 45 34.83539349754894 37.0 34.0 40.0 26.0 41.0 46 34.8164149182264 36.0 34.0 40.0 26.0 41.0 47 34.7685105244091 36.0 34.0 40.0 26.0 41.0 48 34.6614179760601 36.0 34.0 40.0 26.0 41.0 49 34.61920819824601 36.0 34.0 40.0 26.0 41.0 50 34.5236653816956 36.0 34.0 40.0 26.0 41.0 51 34.06735696863 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 5.0 12 3.0 13 7.0 14 14.0 15 47.0 16 152.0 17 413.0 18 956.0 19 1883.0 20 3290.0 21 5487.0 22 8394.0 23 12321.0 24 17765.0 25 25791.0 26 34492.0 27 41366.0 28 45995.0 29 52545.0 30 62275.0 31 77011.0 32 94217.0 33 124524.0 34 213569.0 35 325928.0 36 162834.0 37 205207.0 38 315488.0 39 566570.0 40 205.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.05720421034727 23.986714786032934 29.041791227706682 13.914289775913108 2 29.777005340682695 25.429878891442527 31.270320420117585 13.522795347757194 3 28.835934611134018 25.470775072256174 32.0405109813124 13.652779335297405 4 25.528429932669294 28.280772083208095 31.67398781952486 14.516810164597748 5 22.629887062341037 32.411786604478905 30.6149810089142 14.34334532426586 6 21.97779933523904 40.77824473258442 26.92119293450733 10.322762997669209 7 89.17335103138834 3.3977597564071726 6.076355379056737 1.3525338331477512 8 90.11521383783351 2.425964780926121 5.697450804729283 1.7613705765110848 9 85.79776942808296 4.722320768631421 7.210109235741678 2.2698005675439408 10 45.21800249045651 30.328207484126153 13.630601182195612 10.823188843221718 11 40.02272843810356 21.74405327425829 24.21991889966345 14.01329938797469 12 38.89518613181744 20.869141809695606 24.92107370609028 15.314598352396679 13 22.81139773641098 35.28348223684183 25.848929257944842 16.05619076880234 14 16.647080133585852 36.27941471353705 29.155433418224526 17.91807173465257 15 15.600913306349915 25.11596631088518 42.72262676044301 16.560493622321896 16 18.818121218614476 22.284041276377724 41.175742269850595 17.72209523515721 17 19.024186276475692 23.30582047285323 28.537863568506523 29.132129682164553 18 22.092066849622533 25.12830603516738 33.74214228452486 19.037484830685226 19 26.757233016933352 26.979973377878625 26.175264939299815 20.087528665888208 20 27.734447465916723 26.140538620627268 27.65373899898989 18.471274914466118 21 22.506198001715056 27.936427074522346 30.583881568662434 18.973493355100164 22 22.95739001491189 23.968788835217573 29.407939195174837 23.665881954695703 23 19.280277243589076 28.29298674271716 28.684772988677054 23.74196302501671 24 20.280753740374703 25.091161797547645 36.77533822725687 17.852746234820785 25 18.65236870595896 27.271124169726235 33.14675058790865 20.929756536406146 26 17.941917418062772 34.399524420356045 27.079233119486467 20.579325042094716 27 17.559802847891635 33.55416993050984 30.39086493546449 18.495162286134025 28 15.736983779515807 29.241894864715352 36.32969075233548 18.69143060343336 29 16.754760903251142 25.321656174427005 36.68399925461395 21.2395836677079 30 19.106854091514897 30.83651241038588 31.6128728337218 18.443760664377425 31 25.98641713187288 27.858803538666066 27.01407437268552 19.14070495677553 32 26.851781985419947 27.456803669567197 27.642483169408155 18.0489311756047 33 25.832670837437888 28.170464953307068 25.73128499468683 20.26557921456821 34 18.18183334118462 28.669306645066587 29.55889237634325 23.58996763740554 35 18.817996153841342 28.26384665057778 31.16947652471676 21.74868067086412 36 26.840442779322792 26.862078985074355 27.44346342709995 18.854014808502903 37 18.98754229794848 31.375916776897366 30.03947461122573 19.597066313928423 38 19.771364919414513 31.485932088994424 26.809343339071027 21.933359652520036 39 19.484883212430436 30.9217232091454 29.09185882521656 20.501534753207597 40 23.90579787781755 27.09399076271586 27.23347967301398 21.76673168645261 41 17.86354349356771 25.588627776802735 30.13156397250743 26.416264757122125 42 21.2934448966694 25.734995249623033 27.213927880147924 25.75763197355964 43 21.14011548481151 26.77186559538961 28.070955082152967 24.017063837645914 44 19.259224673445456 29.686791950997954 28.631662148354337 22.422321227202254 45 17.58485749077543 34.967735372945235 25.528263179638454 21.919143956640877 46 21.14682729430284 32.12680567477239 26.951125103543212 19.775241927381558 47 19.56542492632643 28.21832307315831 29.15701757201751 23.05923442849776 48 21.24812976053848 26.970343390347583 31.240179809793155 20.541347039320783 49 20.310936038956843 25.775182730055608 31.75148629060801 22.16239494037954 50 19.279735296238844 30.372480413814323 29.677245339982335 20.670538949964502 51 17.810932912337517 32.37309990132389 26.946872901256775 22.869094285081815 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1029.0 1 2296.0 2 3563.0 3 12479.0 4 21395.0 5 15287.5 6 9180.0 7 9135.5 8 9091.0 9 9590.0 10 10089.0 11 10050.0 12 10011.0 13 9922.0 14 9833.0 15 9122.5 16 8412.0 17 8221.5 18 8031.0 19 7982.5 20 7934.0 21 9120.5 22 10307.0 23 10687.5 24 11068.0 25 13213.0 26 20680.0 27 26002.0 28 29261.5 29 32521.0 30 38141.0 31 43761.0 32 52823.5 33 61886.0 34 69975.0 35 78064.0 36 82807.0 37 87550.0 38 102748.5 39 117947.0 40 152429.5 41 186912.0 42 207662.5 43 228413.0 44 230810.0 45 233207.0 46 225624.5 47 218042.0 48 213087.5 49 208133.0 50 195069.0 51 182005.0 52 162221.0 53 142437.0 54 127538.0 55 112639.0 56 97558.0 57 82477.0 58 74829.5 59 67182.0 60 57903.0 61 48624.0 62 41695.5 63 34767.0 64 29616.0 65 24465.0 66 20400.0 67 16335.0 68 13729.0 69 11123.0 70 9557.0 71 7991.0 72 6362.5 73 4734.0 74 3635.0 75 2307.5 76 2079.0 77 1575.0 78 1071.0 79 708.5 80 346.0 81 230.5 82 115.0 83 72.0 84 29.0 85 33.0 86 37.0 87 28.0 88 19.0 89 11.5 90 4.0 91 2.5 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2398757.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.070696685277444 #Duplication Level Percentage of deduplicated Percentage of total 1 78.7587083350802 13.444660213123862 2 8.620842800106765 2.943275852241609 3 2.8999302228333357 1.4851148772737066 4 1.3664003547932242 0.9330162402932244 5 0.8173965747486699 0.6976764499559627 6 0.5356819828302432 0.5486678789197846 7 0.3877430243664857 0.4633330492554692 8 0.2874003558956496 0.3924899442188338 9 0.2505940918600691 0.3850034159939213 >10 2.971844140704945 12.544350735411985 >50 1.4223712974489027 17.57534336885525 >100 1.67391325875056 47.055882519419804 >500 0.005936739791187608 0.671912604741798 >1k 9.894566318646015E-4 0.30939565453388346 >5k 0.0 0.0 >10k+ 2.473641579661504E-4 0.5498771957609159 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13022 0.5428644919014306 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3376 0.1407395580294294 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.168825771013904E-5 0.0 0.0 0.04235526983350127 0.0 2 4.168825771013904E-5 0.0 0.0 0.1571647315672242 0.0 3 4.168825771013904E-5 0.0 0.0 0.23741462765924184 0.0 4 4.168825771013904E-5 0.0 0.0 0.4670335511266877 0.0 5 4.168825771013904E-5 0.0 0.0 0.7882832650410192 0.0 6 4.168825771013904E-5 0.0 0.0 1.1795275636506741 0.0 7 4.168825771013904E-5 0.0 0.0 1.3567860354341852 0.0 8 4.168825771013904E-5 0.0 0.0 1.8348252865963497 0.0 9 4.168825771013904E-5 0.0 0.0 1.964684209363433 0.0 10 4.168825771013904E-5 0.0 0.0 2.2512909811206385 0.0 11 4.168825771013904E-5 0.0 0.0 2.6474961823978003 0.0 12 4.168825771013904E-5 0.0 0.0 2.9614921394705673 0.0 13 4.168825771013904E-5 0.0 0.0 3.095978458843476 0.0 14 4.168825771013904E-5 0.0 0.0 3.1464629389304544 0.0 15 4.168825771013904E-5 0.0 0.0 3.2289640009388196 0.0 16 4.168825771013904E-5 0.0 0.0 3.415935836768793 0.0 17 4.168825771013904E-5 0.0 0.0 3.62475231963888 0.0 18 4.168825771013904E-5 0.0 0.0 3.880884975009974 0.0 19 4.168825771013904E-5 0.0 0.0 4.0208324561429105 0.0 20 4.168825771013904E-5 0.0 0.0 4.187585486983467 0.0 21 4.168825771013904E-5 0.0 0.0 4.409992341867059 0.0 22 4.168825771013904E-5 0.0 0.0 4.653743584698241 0.0 23 4.168825771013904E-5 0.0 0.0 4.907583385895278 0.0 24 4.168825771013904E-5 0.0 0.0 5.097723529311223 0.0 25 4.168825771013904E-5 0.0 0.0 5.262433835523982 0.0 26 4.168825771013904E-5 0.0 0.0 5.4268940121904805 0.0 27 4.168825771013904E-5 0.0 0.0 5.592938342649964 0.0 28 4.168825771013904E-5 0.0 0.0 5.76260955153023 0.0 29 4.168825771013904E-5 0.0 0.0 5.965881496124868 0.0 30 4.168825771013904E-5 0.0 0.0 6.209841180244601 0.0 31 4.168825771013904E-5 0.0 0.0 6.423243371462804 0.0 32 4.168825771013904E-5 0.0 0.0 6.615509616021964 0.0 33 4.168825771013904E-5 0.0 0.0 6.808025990127387 0.0 34 4.168825771013904E-5 0.0 0.0 7.023054023396284 0.0 35 4.168825771013904E-5 0.0 0.0 7.272933440110857 0.0 36 4.168825771013904E-5 4.168825771013904E-5 0.0 7.484709789278364 0.0 37 4.168825771013904E-5 4.168825771013904E-5 0.0 7.705865996430651 0.0 38 4.168825771013904E-5 4.168825771013904E-5 0.0 7.961289951420674 0.0 39 4.168825771013904E-5 4.168825771013904E-5 0.0 8.387093815672033 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAA 30 2.1664928E-6 45.000004 18 GTCGACA 20 7.0348213E-4 45.000004 33 CGTTGTC 30 2.1664928E-6 45.000004 36 TAACGCG 40 6.8212103E-9 45.000004 1 AATGCGC 40 6.8212103E-9 45.000004 39 CGAATCG 20 7.0348213E-4 45.000004 26 CGTAACG 20 7.0348213E-4 45.000004 16 CGTCGAC 20 7.0348213E-4 45.000004 32 TATCGGC 25 3.8920778E-5 45.000004 44 TGTCGAT 35 1.2126657E-7 45.0 38 ACGTTAG 115 0.0 43.043476 1 ATAGCGG 410 0.0 42.80488 2 CGGTCTA 245 0.0 42.2449 31 CGTTTTT 7755 0.0 41.924564 1 CCTCGTC 1300 0.0 41.71154 36 CTCGTCC 1310 0.0 41.39313 37 TTTCGCG 60 3.6379788E-12 41.250004 1 CCCGATA 60 3.6379788E-12 41.250004 16 CGTTAGG 430 0.0 40.2907 2 CTCCGTA 45 1.9297659E-8 40.0 11 >>END_MODULE