##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547599_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3897185 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.369501576137647 31.0 31.0 33.0 30.0 34.0 2 31.792167680004926 31.0 31.0 34.0 30.0 34.0 3 31.932263672368645 31.0 31.0 34.0 30.0 34.0 4 35.70005016441355 37.0 35.0 37.0 33.0 37.0 5 35.60918791384037 37.0 35.0 37.0 33.0 37.0 6 35.65970206700477 37.0 35.0 37.0 33.0 37.0 7 35.98872314247335 37.0 35.0 37.0 35.0 37.0 8 36.02632438542179 37.0 35.0 37.0 35.0 37.0 9 37.87128196377642 39.0 38.0 39.0 35.0 39.0 10 37.24786788412662 39.0 37.0 39.0 34.0 39.0 11 36.9153227265321 39.0 37.0 39.0 33.0 39.0 12 36.49586945449087 39.0 35.0 39.0 32.0 39.0 13 36.35224116894631 39.0 35.0 39.0 32.0 39.0 14 37.357666880068564 39.0 35.0 41.0 32.0 41.0 15 37.55866067430723 40.0 35.0 41.0 32.0 41.0 16 37.620492227081854 40.0 35.0 41.0 33.0 41.0 17 37.52947140051088 39.0 35.0 41.0 33.0 41.0 18 37.450470788530694 39.0 36.0 41.0 32.0 41.0 19 37.4306185105403 39.0 36.0 41.0 32.0 41.0 20 37.29209673135866 39.0 35.0 41.0 32.0 41.0 21 37.13330442357753 39.0 35.0 41.0 32.0 41.0 22 37.11188203793251 39.0 35.0 41.0 32.0 41.0 23 37.03498114664816 39.0 35.0 41.0 32.0 41.0 24 36.968341764632676 39.0 35.0 41.0 32.0 41.0 25 36.86998282093357 38.0 35.0 41.0 31.0 41.0 26 36.783362863194846 38.0 35.0 41.0 31.0 41.0 27 36.70897840364263 38.0 35.0 40.0 31.0 41.0 28 36.723082173414916 38.0 35.0 40.0 31.0 41.0 29 36.748618810756994 38.0 35.0 40.0 31.0 41.0 30 36.767081624300616 38.0 35.0 41.0 31.0 41.0 31 36.69507554811999 38.0 35.0 41.0 31.0 41.0 32 36.60997258277449 39.0 35.0 41.0 31.0 41.0 33 36.50321013757366 39.0 35.0 41.0 30.0 41.0 34 36.40977834000695 39.0 35.0 41.0 30.0 41.0 35 36.265356404686976 38.0 35.0 41.0 30.0 41.0 36 36.18533172020317 38.0 35.0 41.0 30.0 41.0 37 36.159100478935436 38.0 35.0 41.0 30.0 41.0 38 36.07531179556526 38.0 35.0 41.0 30.0 41.0 39 36.01068617476461 38.0 35.0 41.0 29.0 41.0 40 35.950207393285154 38.0 35.0 41.0 29.0 41.0 41 35.87103229638829 38.0 35.0 40.0 29.0 41.0 42 35.85165087107746 38.0 35.0 40.0 29.0 41.0 43 35.82840717081688 38.0 35.0 40.0 29.0 41.0 44 35.70082533931543 38.0 35.0 40.0 29.0 41.0 45 35.6276581686525 38.0 34.0 40.0 28.0 41.0 46 35.61113239427946 38.0 34.0 40.0 28.0 41.0 47 35.5746617109529 38.0 34.0 40.0 28.0 41.0 48 35.44898227823416 38.0 34.0 40.0 28.0 41.0 49 35.37930583228664 38.0 34.0 40.0 27.0 41.0 50 35.30905178994582 38.0 34.0 40.0 27.0 41.0 51 34.89022307126811 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 0.0 9 4.0 10 2.0 11 4.0 12 8.0 13 11.0 14 16.0 15 64.0 16 150.0 17 442.0 18 984.0 19 1913.0 20 3519.0 21 5886.0 22 9509.0 23 14820.0 24 22563.0 25 33365.0 26 45525.0 27 54347.0 28 61520.0 29 70980.0 30 85491.0 31 107062.0 32 134564.0 33 177564.0 34 288520.0 35 417399.0 36 286537.0 37 370959.0 38 589198.0 39 1113936.0 40 321.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.10748270867306 24.755458106299805 29.57804158642713 13.559017598600015 2 30.287502389545274 25.944829408919517 30.835667282923445 12.932000918611767 3 28.255753832574026 25.904338644431814 32.3019050930351 13.53800242995906 4 24.896585612435643 28.467881304069476 32.12095397062239 14.514579112872497 5 22.932526939316457 32.8166869163255 30.44630932326795 13.804476821090095 6 21.82816571448366 41.2364052514828 26.658036505836908 10.277392528196634 7 91.04089233639152 2.4453291285889684 5.439541617860071 1.0742369171594368 8 91.8860664813192 1.6976869201744336 5.077536734848358 1.3387098636579993 9 86.9040858978981 4.882370223635778 6.390150839644512 1.823393038821611 10 41.87319821871427 37.39170709114399 11.515029437914803 9.220065252226927 11 29.715987308788268 24.079739606921404 29.337021465493685 16.867251618796644 12 30.427731811551155 22.97404408566696 28.499596503630187 18.098627599151694 13 23.48189783138342 28.83912362384644 29.68442606650698 17.994552478263156 14 17.810932763007145 32.63719838806728 30.54763887267348 19.00422997625209 15 17.145144508151397 27.43608527693707 38.765313938137396 16.653456276774133 16 21.985304777679275 25.388940992023727 35.83894528999778 16.786808940299217 17 21.327573620446554 24.778269443200667 29.55361369809234 24.340543238260437 18 22.186065070044148 25.781891288199045 32.9278440720674 19.104199569689403 19 24.958989629694255 26.701170203621334 29.103339974879304 19.23650019180511 20 25.991837698236036 27.556223273978524 28.916256220836324 17.53568280694912 21 23.704904950624616 26.605126520809254 31.885373673561812 17.804594855004314 22 22.92644562677933 23.92747585757412 31.23546867803299 21.91060983761356 23 19.88114498028705 27.895904351474204 30.612275270483696 21.610675397755045 24 19.670531422039243 26.901904836439634 35.15265505743248 18.274908684088643 25 19.91070477793587 28.345049054638157 31.989987644928323 19.75425852249765 26 19.439133631069605 31.648433420533024 28.33098762311771 20.581445325279656 27 18.62934400086216 31.53086137814859 31.373440059940698 18.46635456104855 28 17.515386105612126 28.908635335504982 34.43362324344367 19.14235531543922 29 18.197750427552194 26.538180763807723 34.890234874659534 20.373833933980553 30 20.4789354367319 28.436756274079883 32.161470394656654 18.922837894531565 31 23.24418779195753 27.487019476878828 29.960035256216987 19.30875747494666 32 24.340671535993287 27.24281757217068 29.8227310225201 18.59377986931593 33 23.322423749449925 27.864137832820358 28.88056379155724 19.93287462617248 34 19.21830757328687 28.101899191339392 31.123695693173403 21.55609754220033 35 19.479393459638175 28.219112000071846 31.316732462020664 20.984762078269313 36 23.403944128903298 27.51167830113274 29.489952363051792 19.59442520691217 37 20.07058941261449 30.311622363321217 30.464784196798455 19.153004027265837 38 19.83867843071345 30.34259343603139 28.79968490076812 21.01904323248704 39 19.84024366305423 29.897579919865237 29.77538915909817 20.486787257982364 40 22.42038804932278 27.30801848000544 29.13433670713605 21.13725676353573 41 18.671964507715185 26.92338187691885 30.455880334138612 23.948773281227346 42 20.07099996535961 27.51817016641499 29.517151482416153 22.893678385809242 43 20.736146731551106 26.946783383390834 30.050510817423344 22.266559067634716 44 19.68177030343697 28.97629955981048 29.91972410855528 21.422206028197277 45 18.7989279441443 31.403590027160632 27.892619929513224 21.904862099181845 46 20.742612937286786 30.194178618669632 28.87902421876303 20.184184225280553 47 19.617262203359605 28.186242120915484 30.760561790112607 21.435933885612307 48 20.5243271746145 27.074003415285645 31.884526908525 20.517142501574856 49 20.88956516049405 26.178998430918725 31.667164889529236 21.264271519057985 50 18.91203522542553 29.46644821839353 30.419392458915855 21.202124097265077 51 18.58387528433985 30.36363426421892 28.930343311903332 22.122147139537898 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1621.0 1 3067.0 2 4513.0 3 20514.0 4 36515.0 5 25475.5 6 14436.0 7 14077.5 8 13719.0 9 14412.0 10 15105.0 11 15415.0 12 15725.0 13 15968.5 14 16212.0 15 15507.5 16 14803.0 17 14455.5 18 14108.0 19 14534.0 20 14960.0 21 16067.0 22 17174.0 23 19971.5 24 22769.0 25 27422.5 26 40067.0 27 48058.0 28 58273.5 29 68489.0 30 80414.0 31 92339.0 32 106026.5 33 119714.0 34 133755.5 35 147797.0 36 163619.5 37 179442.0 38 194677.0 39 209912.0 40 240047.0 41 270182.0 42 302968.0 43 335754.0 44 352894.5 45 370035.0 46 366779.0 47 363523.0 48 345102.0 49 326681.0 50 299956.5 51 273232.0 52 246779.5 53 220327.0 54 201300.0 55 182273.0 56 163429.5 57 144586.0 58 125136.0 59 105686.0 60 90085.5 61 74485.0 62 62246.0 63 50007.0 64 40791.0 65 31575.0 66 25745.0 67 19915.0 68 16536.5 69 13158.0 70 10075.5 71 6993.0 72 5568.0 73 4143.0 74 3114.0 75 1746.5 76 1408.0 77 1091.5 78 775.0 79 577.0 80 379.0 81 365.5 82 352.0 83 224.0 84 96.0 85 58.0 86 20.0 87 17.0 88 14.0 89 9.0 90 4.0 91 4.0 92 4.0 93 3.5 94 3.0 95 2.0 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3897185.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.59882340590675 #Duplication Level Percentage of deduplicated Percentage of total 1 76.57370363672621 12.710333842022578 2 8.95652760250957 2.9733564000837145 3 3.1868334212568508 1.5869305555045232 4 1.5332044037261954 1.017975565704387 5 0.9783114367282492 0.8119409387115561 6 0.6473398579439066 0.64470479913694 7 0.4612642659213847 0.5359510865438992 8 0.3568271824047767 0.4738329109731331 9 0.3182976401415346 0.4755029687303569 >10 3.6333468429746656 14.90062753630294 >50 1.7085521160502497 20.5665010142677 >100 1.6404550069712365 41.956118706442794 >500 0.004080919199345535 0.481490163885885 >1k 0.0010987090152084133 0.27671159735035905 >5k 0.0 0.0 >10k+ 1.5695843074405906E-4 0.5880219143392904 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22570 0.5791359660883433 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.5659546570152557E-5 0.0 0.0 0.030534860418481545 0.0 2 2.5659546570152557E-5 0.0 0.0 0.0988149138416575 0.0 3 2.5659546570152557E-5 0.0 0.0 0.16239927024249554 0.0 4 2.5659546570152557E-5 0.0 0.0 0.29983180167223267 0.0 5 2.5659546570152557E-5 0.0 0.0 0.5389531161594844 0.0 6 2.5659546570152557E-5 0.0 0.0 0.877813088164919 0.0 7 2.5659546570152557E-5 0.0 0.0 1.0434198017286838 0.0 8 2.5659546570152557E-5 0.0 0.0 1.480453198911522 0.0 9 2.5659546570152557E-5 0.0 0.0 1.6493956535294065 0.0 10 2.5659546570152557E-5 0.0 0.0 1.9333185363281447 0.0 11 2.5659546570152557E-5 0.0 0.0 2.2902684886655367 0.0 12 2.5659546570152557E-5 0.0 0.0 2.5842242541732046 0.0 13 2.5659546570152557E-5 0.0 0.0 2.714010240725036 0.0 14 2.5659546570152557E-5 0.0 0.0 2.7773123421136026 0.0 15 2.5659546570152557E-5 0.0 0.0 2.85426532227749 0.0 16 2.5659546570152557E-5 0.0 0.0 3.0040400956074707 0.0 17 2.5659546570152557E-5 0.0 0.0 3.1998224359377345 0.0 18 2.5659546570152557E-5 0.0 0.0 3.4216235564901334 0.0 19 2.5659546570152557E-5 0.0 0.0 3.5711673939009825 0.0 20 2.5659546570152557E-5 0.0 0.0 3.7341568337145916 0.0 21 2.5659546570152557E-5 0.0 0.0 3.9392279299032507 0.0 22 2.5659546570152557E-5 0.0 0.0 4.187304426143486 0.0 23 2.5659546570152557E-5 0.0 0.0 4.430479948988822 0.0 24 2.5659546570152557E-5 0.0 0.0 4.620463231794231 0.0 25 2.5659546570152557E-5 0.0 0.0 4.783093437955858 0.0 26 2.5659546570152557E-5 0.0 0.0 4.939437055207797 0.0 27 2.5659546570152557E-5 0.0 0.0 5.112254101357775 0.0 28 5.1319093140305115E-5 0.0 0.0 5.285558678892586 0.0 29 5.1319093140305115E-5 0.0 0.0 5.489013223647325 0.0 30 5.1319093140305115E-5 0.0 0.0 5.74886745176326 0.0 31 5.1319093140305115E-5 0.0 0.0 5.968975042242029 0.0 32 5.1319093140305115E-5 0.0 0.0 6.178844473639306 0.0 33 5.1319093140305115E-5 0.0 0.0 6.378988936886496 0.0 34 5.1319093140305115E-5 0.0 0.0 6.610720301961544 0.0 35 5.1319093140305115E-5 0.0 0.0 6.872986527455073 0.0 36 7.697863971045768E-5 0.0 0.0 7.109105674993617 0.0 37 7.697863971045768E-5 0.0 0.0 7.35346153698118 0.0 38 7.697863971045768E-5 0.0 0.0 7.622912435514352 0.0 39 7.697863971045768E-5 0.0 0.0 8.067181824829973 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 12045 0.0 41.54421 1 CGGTCTA 210 0.0 40.714287 31 TACGGGA 1650 0.0 40.636364 4 TTTCGCG 100 0.0 40.5 1 ATACCGG 85 0.0 39.705883 2 ACGGGAC 1500 0.0 39.449997 5 ACTACGG 160 0.0 39.375004 2 CGTACTC 40 3.461064E-7 39.375004 30 CGAGGGA 2910 0.0 38.891754 4 AGCGGGA 3140 0.0 38.83758 4 GCGTAAG 215 0.0 38.720932 1 GTTAGCG 205 0.0 38.414635 1 GGGCGAT 5710 0.0 38.38003 7 TAGGGAT 7805 0.0 38.369637 5 AGGGATC 5640 0.0 38.33777 6 AGGGCGA 3205 0.0 38.26053 6 TAGTACG 130 0.0 38.076927 1 ACGGGAT 2255 0.0 37.815964 5 TAAGGGA 5785 0.0 37.804665 4 TAGCGCG 90 0.0 37.500004 1 >>END_MODULE