SRR1547598_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547598_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1684184
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14612	0.8676011647183444	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	4448	0.2641041596405143	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGCGTG	25	3.891581E-5	45.000004	2
TCCGCGA	25	3.891581E-5	45.000004	35
TAGCGCG	50	2.1827873E-11	45.000004	1
TTGTCGA	25	3.891581E-5	45.000004	42
CGCGAAA	25	3.891581E-5	45.000004	37
ATTCCGT	25	3.891581E-5	45.000004	39
ACTCGTC	25	3.891581E-5	45.000004	15
TCCCGTC	25	3.891581E-5	45.000004	18
CGTACCA	25	3.891581E-5	45.000004	23
CCGCGAA	25	3.891581E-5	45.000004	36
TAGTGCG	25	3.891581E-5	45.000004	1
TGTCACG	20	7.0342224E-4	45.0	1
GTCGATC	20	7.0342224E-4	45.0	16
CGGTTTG	20	7.0342224E-4	45.0	14
CTATACG	45	3.8562575E-10	45.0	1
TCGATAT	55	1.8189894E-12	45.0	16
CCCCGAT	20	7.0342224E-4	45.0	40
CTAGTCC	35	1.2123746E-7	45.0	39
GTTCGAC	20	7.0342224E-4	45.0	12
TTGCGCA	20	7.0342224E-4	45.0	30