##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547598_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1684184 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.32594063356498 31.0 31.0 33.0 30.0 34.0 2 31.729648304460795 31.0 31.0 34.0 30.0 34.0 3 31.818882616151203 31.0 31.0 34.0 30.0 34.0 4 35.59011426304964 37.0 35.0 37.0 33.0 37.0 5 35.50047916379683 37.0 35.0 37.0 33.0 37.0 6 35.55637210661068 37.0 35.0 37.0 33.0 37.0 7 35.94245996874451 37.0 35.0 37.0 35.0 37.0 8 35.979665523482 37.0 35.0 37.0 35.0 37.0 9 37.85239973779587 39.0 38.0 39.0 35.0 39.0 10 37.160899284163726 39.0 37.0 39.0 33.0 39.0 11 36.82849320501798 39.0 35.0 39.0 32.0 39.0 12 35.936130494055284 37.0 35.0 39.0 32.0 39.0 13 35.582768272350286 37.0 35.0 39.0 31.0 39.0 14 36.52705345734195 38.0 35.0 41.0 31.0 41.0 15 36.842041605905294 38.0 35.0 41.0 32.0 41.0 16 36.99689641986861 38.0 35.0 41.0 32.0 41.0 17 36.91212836602176 38.0 35.0 41.0 32.0 41.0 18 36.846520926454595 38.0 35.0 40.0 32.0 41.0 19 36.78228091467441 38.0 35.0 40.0 32.0 41.0 20 36.579803631907204 38.0 35.0 40.0 32.0 41.0 21 36.36230186250433 37.0 35.0 40.0 31.0 41.0 22 36.26788165663609 37.0 35.0 40.0 31.0 41.0 23 36.26569009086893 37.0 35.0 40.0 31.0 41.0 24 36.16138379179472 37.0 35.0 40.0 31.0 41.0 25 36.07132356084608 37.0 35.0 40.0 31.0 41.0 26 35.93913669765299 36.0 35.0 40.0 31.0 41.0 27 35.88327759912219 36.0 35.0 40.0 31.0 41.0 28 35.928411622483054 36.0 35.0 40.0 31.0 41.0 29 35.971828493798775 36.0 35.0 40.0 31.0 41.0 30 35.96471110044983 36.0 35.0 40.0 31.0 41.0 31 35.82728371721855 36.0 35.0 40.0 30.0 41.0 32 35.637636386523084 36.0 34.0 40.0 30.0 41.0 33 35.472323689098104 36.0 34.0 40.0 30.0 41.0 34 35.38446333654755 36.0 34.0 40.0 29.0 41.0 35 35.19694344560927 36.0 34.0 40.0 29.0 41.0 36 35.039714781757816 36.0 34.0 40.0 27.0 41.0 37 34.9883646917439 36.0 34.0 40.0 27.0 41.0 38 34.93680084836336 36.0 34.0 40.0 27.0 41.0 39 34.940185870427456 36.0 34.0 40.0 27.0 41.0 40 34.82232820166918 36.0 34.0 40.0 26.0 41.0 41 34.800834113137284 36.0 34.0 40.0 26.0 41.0 42 34.772436384623056 36.0 34.0 40.0 26.0 41.0 43 34.721471050669045 36.0 34.0 40.0 26.0 41.0 44 34.60981044826456 35.0 34.0 40.0 26.0 41.0 45 34.49123017437525 35.0 34.0 40.0 25.0 41.0 46 34.46073766286819 35.0 34.0 40.0 25.0 41.0 47 34.41632208832289 35.0 34.0 40.0 25.0 41.0 48 34.31543762439259 35.0 34.0 40.0 24.0 41.0 49 34.27707720771602 36.0 34.0 40.0 24.0 41.0 50 34.167612921153506 35.0 34.0 40.0 24.0 41.0 51 33.71736936106743 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 5.0 14 9.0 15 32.0 16 91.0 17 244.0 18 547.0 19 1183.0 20 2183.0 21 3730.0 22 5715.0 23 8845.0 24 13406.0 25 19521.0 26 26108.0 27 30647.0 28 32827.0 29 37095.0 30 44032.0 31 53271.0 32 67982.0 33 89857.0 34 159724.0 35 277651.0 36 116451.0 37 132062.0 38 196230.0 39 364595.0 40 139.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.808510234036184 24.940980320440048 29.932952694004932 14.317556751518836 2 30.048438887912482 26.1248770918142 30.425001068766832 13.401682951506485 3 27.41149423103414 25.282451323608345 33.70688713347235 13.599167311885163 4 24.636144269272243 28.00412543997568 33.102321361561444 14.257408929190635 5 21.898498026343916 32.59916968692257 32.316124603962514 13.186207682771004 6 20.392783686343062 41.51903829985322 27.847610474864982 10.240567538938738 7 88.48130608057076 3.148705842117013 7.084736584601208 1.2852514927110101 8 89.28745315238716 2.3064582017166773 6.494242909325822 1.9118457365703512 9 86.13067218308689 3.9634624245331866 7.940996945701895 1.964868446678035 10 48.6034186288434 24.80049685782551 14.936253996000437 11.659830517330647 11 42.777333117996605 23.44904119739886 21.737054858614023 12.036570825990509 12 40.741510428789255 22.66242880825373 23.402431088289642 13.193629674667376 13 20.62025289398308 39.9866641649606 24.48491376239176 14.908169178664563 14 14.01212694099932 43.43658412619999 27.379371850106637 15.171917082694053 15 13.05195869334942 27.33501802653392 46.744476850510395 12.868546429606267 16 15.103753509117768 21.82065617533476 46.762645886672715 16.312944428874754 17 15.343691663143694 22.71450150339868 28.678814191323514 33.262992642134115 18 19.6553345715195 26.900979940434063 34.22886097956043 19.214824508486007 19 26.871885732200283 28.511670933817207 26.805978444160495 17.810464889822015 20 30.613579038869865 25.718508191504014 26.19595008621386 17.471962683412265 21 20.64329075682942 30.9629470414159 29.613747666525747 18.780014535228933 22 21.092588458268217 26.313039430371028 27.371237346988213 25.22313476437254 23 18.40766804577172 31.629441913710142 26.246894638590557 23.715995401927582 24 18.75709542425293 25.649513354835342 39.225761555744505 16.36762966516723 25 15.836274421322136 27.739665024724143 36.04819900913439 20.375861544819333 26 15.30711608707837 37.97037615842449 28.484714259249582 18.23779349524755 27 15.90384423554671 39.066040290134566 29.107033435776614 15.923082038542107 28 13.970088778898267 32.67083644067394 38.105753290614324 15.253321489813466 29 14.098993934154464 27.159324634362992 38.341416377307944 20.400265054174604 30 16.879390850405894 34.16752563852881 31.931902927471107 17.02118058359419 31 26.90240496287817 31.443595236624976 25.67409499199612 15.979904808500734 32 28.230941512328815 30.261360991435616 26.647741576929835 14.859955919305728 33 26.883345287688282 30.897989768338853 24.792184226901572 17.426480717071293 34 19.86932544187571 30.684117649852986 26.75473701210794 22.691819896163366 35 18.513594714116746 29.312177291792345 30.737021608090327 21.43720638600058 36 27.89546747861279 28.391375289160802 27.433819582658426 16.27933764956798 37 19.47215981151703 33.820770177130285 30.478439410420716 16.228630600931965 38 18.477553521467964 34.99754183628392 25.366587023745623 21.158317618502494 39 19.259475211734582 34.05079254998266 28.475807868973934 18.213924369308817 40 23.48003543555811 28.99368477553522 26.676123273941567 20.85015651496511 41 16.347798102820118 27.105173781487057 29.06428276245351 27.482745353239313 42 20.98844306797832 27.11152700655035 26.554818238387256 25.345211687084074 43 21.484707134137363 27.752074595174875 27.038375854419705 23.724842416268054 44 18.24254357006123 33.160569153964175 28.298689454358904 20.29819782161569 45 16.920775877220066 40.07661870674463 23.041781658061115 19.96082375797419 46 21.59746203502705 36.03578943868366 24.788087287374776 17.578661238914513 47 19.906257273552058 31.28013328709927 26.655341696631723 22.158267742716948 48 22.235218954698535 26.218156685967802 31.802463388798373 19.744160970535283 49 20.27450682348247 26.048400887313978 32.581831913852646 21.09526037535091 50 18.57380191238012 34.600376205925244 28.278501636400772 18.547320245293864 51 17.265096925276573 35.53762534259914 24.72217999933499 22.475097732789294 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 935.0 1 1515.0 2 2095.0 3 10770.5 4 19446.0 5 13325.5 6 7205.0 7 7825.5 8 8446.0 9 10034.5 10 11623.0 11 12603.0 12 13583.0 13 13265.0 14 12947.0 15 12145.0 16 11343.0 17 10360.0 18 9377.0 19 9822.0 20 10267.0 21 9499.0 22 8731.0 23 9629.0 24 10527.0 25 13228.0 26 15524.0 27 15119.0 28 20270.5 29 25422.0 30 29125.5 31 32829.0 32 36614.5 33 40400.0 34 46896.5 35 53393.0 36 55504.0 37 57615.0 38 65224.0 39 72833.0 40 99369.0 41 125905.0 42 154812.0 43 183719.0 44 186319.0 45 188919.0 46 182852.5 47 176786.0 48 163622.5 49 150459.0 50 138445.0 51 126431.0 52 110298.5 53 94166.0 54 78690.0 55 63214.0 56 54265.0 57 45316.0 58 39001.5 59 32687.0 60 28042.0 61 23397.0 62 19327.0 63 15257.0 64 11928.5 65 8600.0 66 6360.5 67 4121.0 68 3269.5 69 2418.0 70 1809.0 71 1200.0 72 918.5 73 637.0 74 485.5 75 324.5 76 315.0 77 246.5 78 178.0 79 105.0 80 32.0 81 24.5 82 17.0 83 9.0 84 1.0 85 3.0 86 5.0 87 4.0 88 3.0 89 2.0 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1684184.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.449632336565223 #Duplication Level Percentage of deduplicated Percentage of total 1 77.60361488160682 15.093617774356543 2 9.415897068508379 3.662714722028605 3 3.407770545011456 1.9883965256354794 4 1.5862807563132009 1.234103099714415 5 0.9225988556494338 0.8972104268258649 6 0.6131089144373474 0.715484578084622 7 0.4442247773105262 0.6048006015437607 8 0.3354680305961285 0.521978388461305 9 0.2871029421547997 0.5025642000891307 >10 2.7656105010160097 12.776074770500575 >50 1.216191508355295 17.15530149253148 >100 1.3959435261057473 42.93505705244197 >500 0.005259538994632217 0.701330024745131 >1k 6.187692934861432E-4 0.3321012789848458 >5k 0.0 0.0 >10k+ 3.093846467430716E-4 0.8792650640562724 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14612 0.8676011647183444 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4448 0.2641041596405143 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.9375935170978944E-5 0.0 0.0 0.05961343891166286 0.0 2 5.9375935170978944E-5 0.0 0.0 0.22236287721531614 0.0 3 5.9375935170978944E-5 0.0 0.0 0.35239617523976 0.0 4 5.9375935170978944E-5 0.0 0.0 0.651175881020126 0.0 5 5.9375935170978944E-5 0.0 0.0 1.148093082466049 0.0 6 5.9375935170978944E-5 0.0 0.0 1.7569932976444378 0.0 7 5.9375935170978944E-5 0.0 0.0 2.0624231081639537 0.0 8 5.9375935170978944E-5 0.0 0.0 2.81976316126979 0.0 9 5.9375935170978944E-5 0.0 0.0 3.0724671413574765 0.0 10 5.9375935170978944E-5 0.0 0.0 3.5142834749647305 0.0 11 5.9375935170978944E-5 0.0 0.0 4.1373745386489835 0.0 12 5.9375935170978944E-5 0.0 0.0 4.573787662155679 0.0 13 5.9375935170978944E-5 0.0 0.0 4.768303225775806 0.0 14 5.9375935170978944E-5 0.0 0.0 4.837357438379654 0.0 15 5.9375935170978944E-5 0.0 0.0 4.939543422808909 0.0 16 5.9375935170978944E-5 0.0 0.0 5.194028680951725 0.0 17 5.9375935170978944E-5 0.0 0.0 5.485148891095035 0.0 18 5.9375935170978944E-5 0.0 0.0 5.83606066795552 0.0 19 5.9375935170978944E-5 0.0 0.0 6.020363570726239 0.0 20 5.9375935170978944E-5 0.0 0.0 6.208525909283071 0.0 21 5.9375935170978944E-5 0.0 0.0 6.495192924288557 0.0 22 5.9375935170978944E-5 0.0 0.0 6.787560029070458 0.0 23 5.9375935170978944E-5 0.0 0.0 7.111633883233661 0.0 24 5.9375935170978944E-5 0.0 0.0 7.353175187509203 0.0 25 5.9375935170978944E-5 0.0 0.0 7.5548752392850185 0.0 26 5.9375935170978944E-5 0.0 0.0 7.736862480584069 0.0 27 5.9375935170978944E-5 0.0 0.0 7.910062083477815 0.0 28 5.9375935170978944E-5 0.0 0.0 8.0929993397396 0.0 29 5.9375935170978944E-5 0.0 0.0 8.303071398374524 0.0 30 5.9375935170978944E-5 0.0 0.0 8.560881708886916 0.0 31 1.7812780551293683E-4 0.0 0.0 8.802423013162457 0.0 32 1.7812780551293683E-4 0.0 0.0 9.013326334889774 0.0 33 1.7812780551293683E-4 0.0 0.0 9.23384855811479 0.0 34 1.7812780551293683E-4 0.0 0.0 9.466602223985028 0.0 35 1.7812780551293683E-4 0.0 0.0 9.750062938491281 0.0 36 1.7812780551293683E-4 0.0 0.0 10.004607572569268 0.0 37 1.7812780551293683E-4 0.0 0.0 10.244070719113825 0.0 38 1.7812780551293683E-4 0.0 0.0 10.481633835732913 0.0 39 1.7812780551293683E-4 0.0 0.0 10.727984590757304 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCGTG 25 3.891581E-5 45.000004 2 TCCGCGA 25 3.891581E-5 45.000004 35 TAGCGCG 50 2.1827873E-11 45.000004 1 TTGTCGA 25 3.891581E-5 45.000004 42 CGCGAAA 25 3.891581E-5 45.000004 37 ATTCCGT 25 3.891581E-5 45.000004 39 ACTCGTC 25 3.891581E-5 45.000004 15 TCCCGTC 25 3.891581E-5 45.000004 18 CGTACCA 25 3.891581E-5 45.000004 23 CCGCGAA 25 3.891581E-5 45.000004 36 TAGTGCG 25 3.891581E-5 45.000004 1 TGTCACG 20 7.0342224E-4 45.0 1 GTCGATC 20 7.0342224E-4 45.0 16 CGGTTTG 20 7.0342224E-4 45.0 14 CTATACG 45 3.8562575E-10 45.0 1 TCGATAT 55 1.8189894E-12 45.0 16 CCCCGAT 20 7.0342224E-4 45.0 40 CTAGTCC 35 1.2123746E-7 45.0 39 GTTCGAC 20 7.0342224E-4 45.0 12 TTGCGCA 20 7.0342224E-4 45.0 30 >>END_MODULE