##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547597_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 5042923 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.17817047771699 31.0 31.0 33.0 30.0 34.0 2 31.573252456958 31.0 31.0 34.0 30.0 34.0 3 31.638800156179265 31.0 31.0 34.0 30.0 34.0 4 35.46922766815992 37.0 35.0 37.0 33.0 37.0 5 35.38687840365598 37.0 35.0 37.0 33.0 37.0 6 35.43249976253851 37.0 35.0 37.0 33.0 37.0 7 35.84268687029328 37.0 35.0 37.0 35.0 37.0 8 35.87260622460426 37.0 35.0 37.0 35.0 37.0 9 37.675128690245714 39.0 37.0 39.0 35.0 39.0 10 36.96933187359791 39.0 37.0 39.0 32.0 39.0 11 36.696564472628275 39.0 35.0 39.0 32.0 39.0 12 36.13321877014581 38.0 35.0 39.0 32.0 39.0 13 35.93977322279162 38.0 35.0 39.0 31.0 39.0 14 36.934591902355045 39.0 35.0 41.0 31.0 41.0 15 37.15856557793962 39.0 35.0 41.0 32.0 41.0 16 37.2351392238192 39.0 35.0 41.0 32.0 41.0 17 37.14811945373744 39.0 35.0 41.0 32.0 41.0 18 37.02138660455454 39.0 35.0 41.0 32.0 41.0 19 36.940438114958326 38.0 35.0 41.0 32.0 41.0 20 36.769292927930884 38.0 35.0 40.0 31.0 41.0 21 36.5965732572161 38.0 35.0 40.0 31.0 41.0 22 36.54430258007112 38.0 35.0 40.0 31.0 41.0 23 36.47515657090144 38.0 35.0 40.0 31.0 41.0 24 36.380571942105796 38.0 35.0 40.0 31.0 41.0 25 36.26017153147094 38.0 35.0 40.0 30.0 41.0 26 36.12299275638355 38.0 35.0 40.0 30.0 41.0 27 36.03522738697379 38.0 35.0 40.0 30.0 41.0 28 36.060964048033256 38.0 35.0 40.0 30.0 41.0 29 36.07558889953307 38.0 35.0 40.0 30.0 41.0 30 36.04264153944052 38.0 35.0 40.0 30.0 41.0 31 35.92444441447946 38.0 35.0 40.0 30.0 41.0 32 35.75481699799898 38.0 34.0 40.0 29.0 41.0 33 35.55907833611578 38.0 34.0 40.0 28.0 41.0 34 35.37833554071716 38.0 34.0 40.0 27.0 41.0 35 35.16193842341039 38.0 34.0 40.0 26.0 41.0 36 35.04704017888039 38.0 34.0 40.0 25.0 41.0 37 35.00469132683565 38.0 34.0 40.0 25.0 41.0 38 34.921354539817486 38.0 34.0 40.0 25.0 41.0 39 34.844591519640495 38.0 34.0 40.0 24.0 41.0 40 34.756415079111854 37.0 34.0 40.0 24.0 41.0 41 34.677193365831684 37.0 34.0 40.0 23.0 41.0 42 34.63026304387356 37.0 34.0 40.0 23.0 41.0 43 34.56632353894755 37.0 33.0 40.0 23.0 41.0 44 34.426368199554105 37.0 33.0 40.0 23.0 41.0 45 34.33429877870434 37.0 33.0 40.0 23.0 41.0 46 34.29194120156108 37.0 33.0 40.0 23.0 41.0 47 34.231938699044186 36.0 33.0 40.0 23.0 41.0 48 34.09264170799356 36.0 33.0 40.0 23.0 41.0 49 34.013892934712665 36.0 33.0 40.0 23.0 41.0 50 33.90817051935951 36.0 33.0 40.0 23.0 41.0 51 33.476991617758195 35.0 32.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 3.0 11 7.0 12 10.0 13 19.0 14 48.0 15 129.0 16 397.0 17 1039.0 18 2355.0 19 4891.0 20 8381.0 21 13976.0 22 21516.0 23 31950.0 24 47330.0 25 69109.0 26 90613.0 27 102285.0 28 107474.0 29 118671.0 30 137087.0 31 163885.0 32 200816.0 33 255091.0 34 404372.0 35 583376.0 36 379176.0 37 468916.0 38 686847.0 39 1142836.0 40 313.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.73161220189164 23.477336457447397 28.961854067571522 14.829197273089436 2 32.35034522636971 24.92911353197342 29.568149265812703 13.152391975844168 3 27.878514107790263 24.88035212911242 33.27306405431929 13.968069708778025 4 24.523733556907374 27.558263332595008 33.38597476106615 14.532028349431469 5 23.00362309716012 31.13571236364307 31.798542234335127 14.062122304861685 6 21.167743390093406 40.28518777700948 28.60384741151114 9.943221421385969 7 86.57722911890585 3.1485311197493995 8.574511250717094 1.6997285106276658 8 86.82750063802283 2.6613930056040913 8.296557373570844 2.2145489828022358 9 81.85607831013878 5.082885461467486 10.1555982512523 2.905437977141432 10 41.06745234856848 30.06728439042198 16.946163960861586 11.919099300147948 11 33.99433225532097 23.615966375056686 26.93507317085746 15.454628198764883 12 32.67888484515826 21.86315357184712 28.897724593455028 16.560236989539597 13 22.271071757391496 31.365261773776837 30.065222094408345 16.298444374423326 14 17.62339024411041 32.97345606902981 31.38602354229878 18.017130144561 15 16.542846281809183 26.35931581743366 41.088670201785746 16.00916769897141 16 18.808218963486055 23.815493514376485 39.46102290278872 17.91526461934874 17 19.51834283410633 24.464402886976462 29.92655251726033 26.09070176165688 18 21.85496387710064 25.06240924162435 34.21525571578229 18.86737116549271 19 25.051324400551028 27.611942518257766 28.465792557213348 18.87094052397786 20 26.477104647443557 26.061234724385045 29.08717820993896 18.37448241823244 21 21.928195215354272 28.331366550708786 31.29145537221171 18.448982861725234 22 22.500759975910796 24.0133946126086 30.539312220313498 22.946533191167106 23 19.591494853282512 28.443622875066705 29.44106027397206 22.523821997678727 24 20.0046679277078 25.501341186450794 36.00023240489692 18.493758480944482 25 19.1865114736037 27.326393839445895 32.997450089957745 20.489644596992658 26 18.750197058333036 31.787159946721378 29.802358671746525 19.660284323199065 27 18.39649346222419 31.666773416925064 30.855220276018493 19.08151284483225 28 17.288624077742217 28.32145166602782 35.71488202377867 18.6750422324513 29 17.91363857826106 25.947372188708812 34.75898799168657 21.380001241343564 30 19.75356355827761 29.64034945605951 31.635343232486395 18.97074375317648 31 24.456272681538067 27.66506647037839 28.749199620934128 19.129461227149413 32 24.986302586813245 27.754340092045826 28.421869618076663 18.837487703064273 33 24.16840391971085 28.2325349802089 27.33367136480172 20.26538973527853 34 19.085320160549745 28.66992020302511 30.042735135951908 22.20202450047324 35 19.935581011250818 27.82963372631309 30.999600826742746 21.23518443569335 36 24.400491540322943 27.427347195267505 28.642634440383084 19.529526824026462 37 19.04583908975013 31.191632313243726 30.553272377944303 19.20925621906184 38 19.48667469243532 30.50441182623649 28.669027863403823 21.339885617924367 39 19.29896609565524 30.741337910572895 29.313693665360347 20.64600232841152 40 22.47795574114457 27.45721082792658 29.077798729030764 20.987034701898086 41 17.94510842223845 26.547678796602685 30.844611349409856 24.662601431749007 42 20.85766528658082 27.28562383363775 28.35760133557463 23.499109544206803 43 20.54142012479667 27.62134182893532 28.757944549222742 23.079293497045263 44 19.211834089078895 30.08312837614217 28.66480412252973 22.040233412249204 45 18.477101474680456 32.44181995243631 26.84157580831593 22.239502764567295 46 20.775867487962834 30.93557050147305 27.576129954790108 20.712432055774002 47 19.77702217543278 28.7704174741514 29.040379954244788 22.41218039617103 48 20.625775963662342 26.910583405695466 31.105928050061443 21.357712580580746 49 20.24387443552083 26.632332082008787 31.100336055101373 22.02345742736901 50 18.805323817159213 29.869165164726887 30.147634615876544 21.177876402237352 51 18.118499925539215 30.242282105041063 27.846052775344777 23.793165194074945 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2449.0 1 4175.5 2 5902.0 3 33915.5 4 61929.0 5 44822.0 6 27715.0 7 27678.5 8 27642.0 9 29514.5 10 31387.0 11 32162.5 12 32938.0 13 32923.5 14 32909.0 15 32516.0 16 32123.0 17 30343.0 18 28563.0 19 28076.0 20 27589.0 21 30385.5 22 33182.0 23 33305.0 24 33428.0 25 39210.0 26 50243.0 27 55494.0 28 68514.5 29 81535.0 30 90238.5 31 98942.0 32 114243.5 33 129545.0 34 148793.5 35 168042.0 36 188254.0 37 208466.0 38 223137.5 39 237809.0 40 280658.5 41 323508.0 42 370577.0 43 417646.0 44 428072.0 45 438498.0 46 443150.5 47 447803.0 48 440196.5 49 432590.0 50 404545.5 51 376501.0 52 336700.0 53 296899.0 54 262567.5 55 228236.0 56 203241.0 57 178246.0 58 159237.0 59 140228.0 60 124953.0 61 109678.0 62 94931.0 63 80184.0 64 68432.0 65 56680.0 66 49644.0 67 42608.0 68 35573.0 69 28538.0 70 22526.0 71 16514.0 72 14183.0 73 11852.0 74 9036.0 75 5242.0 76 4264.0 77 3218.5 78 2173.0 79 1391.0 80 609.0 81 628.5 82 648.0 83 386.0 84 124.0 85 80.0 86 36.0 87 30.5 88 25.0 89 18.0 90 11.0 91 13.0 92 15.0 93 9.5 94 4.0 95 3.5 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 5042923.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.641334460093347 #Duplication Level Percentage of deduplicated Percentage of total 1 77.39900985655594 15.976188493292328 2 9.69609909574165 4.002808487868241 3 3.5994706308048947 2.2289363150918104 4 1.7673446586873234 1.4592140882489826 5 1.0762631856086664 1.1107754190617005 6 0.7406162048390034 0.9172384074388127 7 0.5035255268932063 0.727540716685818 8 0.4095683625830522 0.6763230045079649 9 0.30425651397086595 0.5652234419881237 >10 2.5963548115870556 11.619279473367632 >50 0.7579440467709075 11.40529439500733 >100 1.1381780100350787 46.514337185551604 >500 0.009310897522727376 1.2603979870378317 >1k 0.0019601889521498736 0.7623443444108443 >5k 0.0 0.0 >10k+ 9.800944760749368E-5 0.774098240440956 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 38264 0.758766294865101 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.948930808580659E-5 0.0 0.0 0.06087739194114207 0.0 2 5.948930808580659E-5 0.0 0.0 0.19688977999465787 0.0 3 5.948930808580659E-5 0.0 0.0 0.34450258312490595 0.0 4 5.948930808580659E-5 0.0 0.0 0.5601513249359548 0.0 5 5.948930808580659E-5 0.0 0.0 0.9609902828181196 0.0 6 5.948930808580659E-5 0.0 0.0 1.5595320412387816 0.0 7 5.948930808580659E-5 0.0 0.0 1.86205500262447 0.0 8 5.948930808580659E-5 0.0 0.0 2.619314235018064 0.0 9 5.948930808580659E-5 0.0 0.0 2.911486056796822 0.0 10 5.948930808580659E-5 0.0 0.0 3.4206748744726023 0.0 11 5.948930808580659E-5 0.0 0.0 3.9559001793206043 0.0 12 5.948930808580659E-5 0.0 0.0 4.371214868836982 0.0 13 5.948930808580659E-5 0.0 0.0 4.576452981733015 0.0 14 5.948930808580659E-5 0.0 0.0 4.670406428969866 0.0 15 5.948930808580659E-5 0.0 0.0 4.791903425850444 0.0 16 5.948930808580659E-5 0.0 0.0 5.066644880360061 0.0 17 5.948930808580659E-5 0.0 0.0 5.386955144863405 0.0 18 5.948930808580659E-5 0.0 0.0 5.776411815131819 0.0 19 5.948930808580659E-5 0.0 0.0 5.994955703269711 0.0 20 5.948930808580659E-5 0.0 0.0 6.224009369169428 0.0 21 5.948930808580659E-5 0.0 0.0 6.55413536950693 0.0 22 5.948930808580659E-5 0.0 0.0 6.901890034807194 0.0 23 5.948930808580659E-5 0.0 0.0 7.319128211951679 0.0 24 5.948930808580659E-5 0.0 0.0 7.610863778804475 0.0 25 5.948930808580659E-5 0.0 0.0 7.869582779669648 0.0 26 7.931907744774211E-5 0.0 0.0 8.111168859806108 0.0 27 7.931907744774211E-5 0.0 0.0 8.367171182268697 0.0 28 7.931907744774211E-5 0.0 0.0 8.647167525659226 0.0 29 7.931907744774211E-5 0.0 0.0 8.943622577620163 0.0 30 7.931907744774211E-5 0.0 0.0 9.293261071009809 0.0 31 7.931907744774211E-5 0.0 0.0 9.614582653750613 0.0 32 7.931907744774211E-5 0.0 0.0 9.916292594592461 0.0 33 7.931907744774211E-5 0.0 0.0 10.23366805323024 0.0 34 7.931907744774211E-5 0.0 0.0 10.553958487964222 0.0 35 7.931907744774211E-5 0.0 0.0 10.902407195192154 0.0 36 7.931907744774211E-5 0.0 0.0 11.21976282406057 0.0 37 7.931907744774211E-5 0.0 0.0 11.551336397561494 0.0 38 7.931907744774211E-5 0.0 0.0 11.902263825959666 0.0 39 7.931907744774211E-5 0.0 0.0 12.328207271854042 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACTACG 20 7.0355623E-4 45.000004 35 TCCCGTA 20 7.0355623E-4 45.000004 25 CGTTTTT 26335 0.0 43.09474 1 ACGTTAG 235 0.0 40.212765 1 CTAAGCG 235 0.0 40.212765 1 AGGGCGA 4220 0.0 39.98815 6 GGGCGAT 7365 0.0 39.25662 7 CGGGATC 1190 0.0 39.138657 6 CTATACG 180 0.0 38.75 1 TCACGAC 390 0.0 38.653847 25 TAATCGT 990 0.0 38.636364 21 ACGCGAT 35 6.2525014E-6 38.571426 32 AACGGTC 35 6.2525014E-6 38.571426 16 ACGTAAG 270 0.0 38.333332 1 GACCGAT 2330 0.0 38.240345 9 TCGTTAG 255 0.0 37.941177 1 TAAGGGA 5695 0.0 37.928005 4 AATCGTT 945 0.0 37.619045 22 AAGGGAT 7135 0.0 37.526276 5 TACGGGA 1715 0.0 37.259476 4 >>END_MODULE