##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547596_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3708443 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.217311146483848 31.0 31.0 33.0 30.0 34.0 2 31.61477417881305 31.0 31.0 34.0 30.0 34.0 3 31.691009677107076 31.0 31.0 34.0 30.0 34.0 4 35.51147449212513 37.0 35.0 37.0 33.0 37.0 5 35.43078806927867 37.0 35.0 37.0 33.0 37.0 6 35.477283053831485 37.0 35.0 37.0 33.0 37.0 7 35.8625932770168 37.0 35.0 37.0 35.0 37.0 8 35.89182009808429 37.0 35.0 37.0 35.0 37.0 9 37.71983498195873 39.0 37.0 39.0 35.0 39.0 10 36.98123039777071 39.0 37.0 39.0 32.0 39.0 11 36.716437059973686 39.0 35.0 39.0 32.0 39.0 12 36.190317607686026 38.0 35.0 39.0 32.0 39.0 13 35.99225901544125 38.0 35.0 39.0 31.0 39.0 14 36.978546522084876 39.0 35.0 41.0 31.0 41.0 15 37.20480535901455 39.0 35.0 41.0 32.0 41.0 16 37.28563496863778 39.0 35.0 41.0 32.0 41.0 17 37.197524945104995 39.0 35.0 41.0 32.0 41.0 18 37.08379662300324 39.0 35.0 41.0 32.0 41.0 19 37.00644852839858 38.0 35.0 41.0 32.0 41.0 20 36.83283307846447 38.0 35.0 41.0 31.0 41.0 21 36.6749768029332 38.0 35.0 41.0 31.0 41.0 22 36.62387449395879 38.0 35.0 40.0 31.0 41.0 23 36.55187284798499 38.0 35.0 40.0 31.0 41.0 24 36.45108769367629 38.0 35.0 40.0 31.0 41.0 25 36.34334274518983 38.0 35.0 40.0 31.0 41.0 26 36.21171337944253 38.0 35.0 40.0 30.0 41.0 27 36.13160671473176 38.0 35.0 40.0 30.0 41.0 28 36.12290710683702 38.0 35.0 40.0 30.0 41.0 29 36.13491618989425 38.0 35.0 40.0 30.0 41.0 30 36.114500074559594 38.0 35.0 40.0 30.0 41.0 31 35.989866367097996 38.0 35.0 40.0 30.0 41.0 32 35.842056625920904 38.0 35.0 40.0 29.0 41.0 33 35.674553983976566 38.0 34.0 40.0 29.0 41.0 34 35.504187067186955 38.0 34.0 40.0 27.0 41.0 35 35.31325114070784 38.0 34.0 40.0 27.0 41.0 36 35.2006025170132 38.0 34.0 40.0 25.0 41.0 37 35.15718780091807 38.0 34.0 40.0 25.0 41.0 38 35.06468321071674 38.0 34.0 40.0 25.0 41.0 39 34.99254242279037 38.0 34.0 40.0 25.0 41.0 40 34.914113011848904 38.0 34.0 40.0 24.0 41.0 41 34.841195617675666 38.0 34.0 40.0 24.0 41.0 42 34.801088758813336 37.0 34.0 40.0 24.0 41.0 43 34.75379424734316 37.0 34.0 40.0 24.0 41.0 44 34.62370110582797 37.0 34.0 40.0 24.0 41.0 45 34.54145985255807 37.0 34.0 40.0 23.0 41.0 46 34.521157531610974 37.0 34.0 40.0 23.0 41.0 47 34.459829098087795 37.0 33.0 40.0 23.0 41.0 48 34.322518102610715 37.0 33.0 40.0 23.0 41.0 49 34.258465614814625 36.0 33.0 40.0 24.0 41.0 50 34.17406766127995 36.0 33.0 40.0 23.0 41.0 51 33.74987535200083 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 2.0 10 6.0 11 5.0 12 4.0 13 16.0 14 27.0 15 109.0 16 265.0 17 769.0 18 1714.0 19 3513.0 20 6082.0 21 9730.0 22 14651.0 23 21912.0 24 33145.0 25 47987.0 26 63538.0 27 72394.0 28 76914.0 29 84768.0 30 98225.0 31 118282.0 32 143923.0 33 184918.0 34 293901.0 35 415277.0 36 281495.0 37 345619.0 38 512755.0 39 876251.0 40 243.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.06628765765039 24.33735667502507 28.64412369288135 14.952231974443183 2 32.30328739042234 25.27705023375039 29.480134924549194 12.939527451278071 3 28.322668030761157 24.52080293535589 33.19500933410598 13.96151969977697 4 24.52339162284549 27.587831335145236 33.36251898707894 14.52625805493033 5 22.4938067000086 31.649482006329883 32.16908012338332 13.6876311702782 6 21.072024027334383 40.26352838644143 28.54421653507955 10.120231051144644 7 87.6695691426294 2.950052083852981 7.971917055216974 1.4084617183006454 8 88.21243848159457 2.378113941619165 7.718252646730717 1.6911949300555518 9 83.47961664774138 4.688625388067176 9.339094601157413 2.492663363034028 10 41.3271823242261 28.255416087020883 17.878985870889753 12.538415717863266 11 34.29654979192076 24.011775292218324 25.778338779913835 15.913336135947082 12 32.70199919481033 21.80947637593459 28.348474009173124 17.14005042008196 13 23.010357716162822 29.899286573907162 29.502273595684226 17.58808211424579 14 18.662953697818736 32.139687734178466 30.994382278492616 18.202976289510183 15 17.382605044758677 26.261236858703235 39.449790653382024 16.90636744315606 16 20.298977225752154 23.402355112374654 38.02123964154229 18.277428020330905 17 20.72988583079206 25.008797492640443 29.648049059942405 24.61326761662509 18 22.64519098716092 25.505124387782153 33.206955048250705 18.64272957680622 19 25.095356730573993 28.134341015892655 28.13431405039797 18.635988203135387 20 26.2941617277116 26.94831766323495 28.655044718228105 18.10247589082534 21 22.701629767533166 27.98759479382587 30.94616797399879 18.36460746464217 22 22.88963319646547 24.442387276816714 30.830863518732794 21.83711600798502 23 20.292613369006883 28.000106783358948 29.743722635078928 21.963557212555244 24 20.199690274328066 26.06695046950971 35.30306384647142 18.430295409690807 25 19.698159038712472 27.712438886076985 32.02314286615704 20.566259209053502 26 18.909876732634153 31.612701071581796 29.31311065048054 20.164311545303516 27 18.728776470340787 30.93818618757252 31.157280831874722 19.175756510211965 28 17.69567443803235 28.688859448561026 34.624638965733055 18.990827147673564 29 18.04843703947991 26.207980006703625 34.3016732359106 21.441909717905872 30 19.691040148116066 29.256914559560443 31.64352263200486 19.40852266031863 31 23.975857253300102 27.877009300129462 28.8534298626135 19.293703583956933 32 24.72166890525215 27.082686723242073 28.945759716409285 19.24988465509649 33 24.009375363191506 28.46806597809377 27.53470931061904 19.987849348095683 34 19.22440226262073 28.334802503368667 30.19884625434448 22.24194897966613 35 19.7818329687149 28.646065208498555 30.592839097162877 20.979262725623666 36 24.7552679116276 27.863202966851585 28.35699510549306 19.02453401602775 37 20.21058433418014 31.052519885029916 29.604257096576646 19.132638684213294 38 20.45540406041026 30.966742646442185 27.986974587448156 20.5908787056994 39 20.16075210000531 30.135585203817346 29.157519746157618 20.546142950019725 40 22.419732486113446 28.233331346875225 28.246301749817913 21.100634417193415 41 18.898308535414998 26.5046813447045 30.16624497127231 24.430765148608188 42 21.123743846137046 26.400729362700194 28.55343873426125 23.922088056901508 43 20.96971694050576 27.47039660579925 29.001497393919767 22.558389059775223 44 20.007830779656043 29.7620591714636 28.695465994758447 21.534644054121905 45 18.29751731387 32.557787729243785 26.754678445913825 22.390016510972394 46 20.74606512760207 30.93616377547127 27.263598227072656 21.054172869854007 47 19.83374154598035 28.454313575805262 29.63507865699972 22.076866221214672 48 20.875930949997073 27.40481652272935 31.35801197429757 20.361240552976007 49 20.8925686602167 26.558369644619052 30.868750038762897 21.68031165640135 50 19.635059781153437 29.38470403886483 29.84257813858808 21.137658041393653 51 18.478078266269698 31.007865025834292 27.773866282965653 22.740190424930354 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1834.0 1 3223.0 2 4612.0 3 28370.5 4 52129.0 5 36353.5 6 20578.0 7 20398.5 8 20219.0 9 21629.0 10 23039.0 11 24315.5 12 25592.0 13 25687.5 14 25783.0 15 24905.0 16 24027.0 17 22477.5 18 20928.0 19 19731.0 20 18534.0 21 19503.5 22 20473.0 23 19909.5 24 19346.0 25 23220.5 26 34171.0 27 41247.0 28 48653.5 29 56060.0 30 66673.0 31 77286.0 32 86973.5 33 96661.0 34 108438.5 35 120216.0 36 128888.0 37 137560.0 38 152790.5 39 168021.0 40 201900.0 41 235779.0 42 265910.5 43 296042.0 44 305220.5 45 314399.0 46 314460.0 47 314521.0 48 308296.5 49 302072.0 50 286016.5 51 269961.0 52 247853.5 53 225746.0 54 208509.0 55 191272.0 56 172052.0 57 152832.0 58 135110.0 59 117388.0 60 103424.0 61 89460.0 62 78830.0 63 68200.0 64 56829.5 65 45459.0 66 38430.0 67 31401.0 68 26106.5 69 20812.0 70 17000.0 71 13188.0 72 10882.0 73 8576.0 74 7021.5 75 3984.5 76 2502.0 77 1709.0 78 916.0 79 826.0 80 736.0 81 484.5 82 233.0 83 164.0 84 95.0 85 76.0 86 57.0 87 58.0 88 59.0 89 37.0 90 15.0 91 10.0 92 5.0 93 6.5 94 8.0 95 4.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3708443.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.13994169024754 #Duplication Level Percentage of deduplicated Percentage of total 1 77.58215358575929 15.625000494210209 2 8.713310100834686 3.5097111471971094 3 3.0540604256933666 1.8452579667587092 4 1.6487335990411638 1.32821594189764 5 0.963240755037363 0.9699806320061252 6 0.6601059223586659 0.797669687141436 7 0.4950322768651034 0.6978944833597561 8 0.3845880258630513 0.6196464332519411 9 0.32278227614750776 0.5850734598230567 >10 3.6700329996568732 17.677436658038168 >50 1.3711868608919113 19.70804155831084 >100 1.1297153190255755 34.80030155683 >500 0.003554166850337188 0.46948688495767643 >1k 0.0013669872501296876 0.42717167108446075 >5k 0.0 0.0 >10k+ 1.3669872501296875E-4 0.9391114251328976 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 34111 0.9198199891436918 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4244 0.11444155943612994 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.696549468334824E-5 0.0 0.0 0.0383449334397212 0.0 2 2.696549468334824E-5 0.0 0.0 0.12625244610743647 0.0 3 2.696549468334824E-5 0.0 0.0 0.21815085198828726 0.0 4 2.696549468334824E-5 0.0 0.0 0.3700744490342713 0.0 5 2.696549468334824E-5 0.0 0.0 0.6731396437804221 0.0 6 2.696549468334824E-5 0.0 0.0 1.1001382520912415 0.0 7 2.696549468334824E-5 0.0 0.0 1.329371922394385 0.0 8 2.696549468334824E-5 0.0 0.0 1.8501565212138895 0.0 9 2.696549468334824E-5 0.0 0.0 2.062995170749557 0.0 10 2.696549468334824E-5 0.0 0.0 2.422364318394539 0.0 11 2.696549468334824E-5 0.0 0.0 2.843349621390972 0.0 12 2.696549468334824E-5 0.0 0.0 3.152239362988726 0.0 13 2.696549468334824E-5 0.0 0.0 3.3082077842372124 0.0 14 2.696549468334824E-5 0.0 0.0 3.3814730332918694 0.0 15 2.696549468334824E-5 0.0 0.0 3.468490684635034 0.0 16 2.696549468334824E-5 0.0 0.0 3.6664174156108102 0.0 17 2.696549468334824E-5 0.0 0.0 3.893062398424352 0.0 18 2.696549468334824E-5 0.0 0.0 4.162285897342901 0.0 19 2.696549468334824E-5 0.0 0.0 4.327988862172076 0.0 20 2.696549468334824E-5 0.0 0.0 4.494473826347068 0.0 21 2.696549468334824E-5 0.0 0.0 4.7318241105498995 0.0 22 2.696549468334824E-5 0.0 0.0 4.988778309387524 0.0 23 2.696549468334824E-5 0.0 0.0 5.281057306260336 0.0 24 2.696549468334824E-5 0.0 0.0 5.502228293653158 0.0 25 2.696549468334824E-5 0.0 0.0 5.698968542862867 0.0 26 2.696549468334824E-5 0.0 0.0 5.8843563188108865 0.0 27 2.696549468334824E-5 0.0 0.0 6.084224565403863 0.0 28 2.696549468334824E-5 0.0 0.0 6.293422873157279 0.0 29 2.696549468334824E-5 0.0 0.0 6.519798201023987 0.0 30 2.696549468334824E-5 0.0 0.0 6.790531767644804 0.0 31 2.696549468334824E-5 0.0 0.0 7.041850178093609 0.0 32 2.696549468334824E-5 0.0 0.0 7.27782522206759 0.0 33 2.696549468334824E-5 0.0 0.0 7.512613784275503 0.0 34 2.696549468334824E-5 0.0 0.0 7.761235645255974 0.0 35 2.696549468334824E-5 0.0 0.0 8.051923677942469 0.0 36 2.696549468334824E-5 0.0 0.0 8.295098508996903 0.0 37 2.696549468334824E-5 0.0 0.0 8.56817807365517 0.0 38 2.696549468334824E-5 0.0 0.0 8.87213312972587 0.0 39 2.696549468334824E-5 0.0 0.0 9.29848456616429 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 18615 0.0 42.4859 1 TATAGCG 170 0.0 42.35294 1 GCGTAAG 315 0.0 40.714283 1 TACGGGA 1315 0.0 40.55133 4 CGTAAGG 700 0.0 40.17857 2 TCGTCCC 1475 0.0 39.508472 38 GCGATAC 120 0.0 39.374996 9 TGCGTAG 210 0.0 38.57143 1 GGGCGAT 5205 0.0 37.910664 7 GACCGAT 1595 0.0 37.664577 9 TAGGGAC 3190 0.0 37.523514 5 TATTACG 150 0.0 37.5 1 CGTAAAC 30 1.14041235E-4 37.499996 39 ACGGGAC 1055 0.0 37.322277 5 CGTCCCC 1585 0.0 37.19243 39 TAACGGG 955 0.0 36.98953 3 AGGGATC 3075 0.0 36.95122 6 TGGGCGA 1555 0.0 36.463024 6 CTCGTCC 1605 0.0 36.448597 37 TAGGGCA 2535 0.0 36.301773 5 >>END_MODULE