SRR1547595_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547595_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1346301
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7082	0.5260339255485957	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3328	0.24719583510671092	No Hit
AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	1923	0.14283581457638375	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	1914	0.14216731622423218	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	1729	0.1284259612077834	No Hit
GAGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCT	1468	0.1090395089953881	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATACCGG	35	1.2121382E-7	45.000004	2
TACGTAA	35	1.2121382E-7	45.000004	34
TCGCCTA	20	7.0337177E-4	45.0	38
CTATGCG	50	2.1827873E-11	45.0	1
ATCTCGA	20	7.0337177E-4	45.0	29
AAATCGT	20	7.0337177E-4	45.0	15
TTTACGC	20	7.0337177E-4	45.0	29
CTATACG	25	3.8911636E-5	45.0	1
GACCGTA	20	7.0337177E-4	45.0	9
CAACCCG	45	3.8562575E-10	45.0	1
CCTACGG	25	3.8911636E-5	45.0	17
CAATTCG	20	7.0337177E-4	45.0	36
CGATTCG	40	6.8157533E-9	45.0	10
TCGATAG	45	3.8562575E-10	45.0	1
CCTCGAC	20	7.0337177E-4	45.0	10
ACGATTT	20	7.0337177E-4	45.0	34
CCGTACA	20	7.0337177E-4	45.0	32
ACCTACG	20	7.0337177E-4	45.0	10
TACGATC	40	6.8157533E-9	45.0	29
ACGTCCC	20	7.0337177E-4	45.0	34