##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547594_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1788700 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.287219209481748 31.0 31.0 33.0 30.0 34.0 2 31.681220998490524 31.0 31.0 34.0 30.0 34.0 3 31.76102644378599 31.0 31.0 34.0 30.0 34.0 4 35.53941969027785 37.0 35.0 37.0 33.0 37.0 5 35.44146586906692 37.0 35.0 37.0 33.0 37.0 6 35.4985643204562 37.0 35.0 37.0 33.0 37.0 7 35.899053502543744 37.0 35.0 37.0 35.0 37.0 8 35.93776597528932 37.0 35.0 37.0 35.0 37.0 9 37.772025493375075 39.0 38.0 39.0 35.0 39.0 10 37.15279644434506 39.0 37.0 39.0 33.0 39.0 11 36.79322245206016 39.0 35.0 39.0 32.0 39.0 12 35.71475820428244 37.0 35.0 39.0 32.0 39.0 13 35.29812154078381 37.0 35.0 39.0 30.0 39.0 14 36.230087773243135 38.0 35.0 40.0 31.0 41.0 15 36.58489797059317 38.0 35.0 41.0 31.0 41.0 16 36.76484877285179 38.0 35.0 41.0 32.0 41.0 17 36.690757533404145 38.0 35.0 40.0 32.0 41.0 18 36.6111164532901 38.0 35.0 40.0 32.0 41.0 19 36.50978867333818 37.0 35.0 40.0 31.0 41.0 20 36.310228098619106 37.0 35.0 40.0 31.0 41.0 21 36.096629954715716 36.0 35.0 40.0 31.0 41.0 22 36.00741655951249 36.0 35.0 40.0 31.0 41.0 23 36.018373679208366 36.0 35.0 40.0 31.0 41.0 24 35.913507016268795 36.0 35.0 40.0 31.0 41.0 25 35.83548275283726 36.0 34.0 40.0 31.0 41.0 26 35.66009615922178 36.0 34.0 40.0 30.0 41.0 27 35.61770168278638 36.0 34.0 40.0 30.0 41.0 28 35.66447978979147 36.0 34.0 40.0 30.0 41.0 29 35.72273662436406 36.0 35.0 40.0 30.0 41.0 30 35.735056186056916 36.0 35.0 40.0 30.0 41.0 31 35.544397048135515 36.0 34.0 40.0 30.0 41.0 32 35.34744563090513 36.0 34.0 40.0 29.0 41.0 33 35.15830211885727 36.0 34.0 40.0 29.0 41.0 34 35.06578185274221 36.0 34.0 40.0 28.0 41.0 35 34.89115670598759 35.0 34.0 40.0 27.0 41.0 36 34.69428914854363 35.0 34.0 40.0 25.0 41.0 37 34.64274333314698 35.0 34.0 40.0 25.0 41.0 38 34.628575501761055 35.0 34.0 40.0 26.0 41.0 39 34.60252138424554 36.0 34.0 40.0 25.0 41.0 40 34.48159948565998 36.0 34.0 40.0 24.0 41.0 41 34.45667579806563 36.0 34.0 40.0 24.0 41.0 42 34.40092637110751 35.0 34.0 40.0 24.0 41.0 43 34.31232794767149 35.0 33.0 40.0 24.0 41.0 44 34.16652373231956 35.0 33.0 40.0 23.0 41.0 45 34.07316766366635 35.0 33.0 40.0 23.0 41.0 46 34.026532118298206 35.0 33.0 40.0 23.0 41.0 47 33.98343042433052 35.0 33.0 40.0 23.0 41.0 48 33.871860569128415 35.0 33.0 40.0 23.0 41.0 49 33.86436629954716 35.0 33.0 39.0 24.0 41.0 50 33.730818471515626 35.0 33.0 39.0 24.0 41.0 51 33.27402135629228 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 0.0 13 7.0 14 13.0 15 31.0 16 110.0 17 302.0 18 764.0 19 1590.0 20 2667.0 21 4623.0 22 7231.0 23 10866.0 24 16011.0 25 23070.0 26 30823.0 27 36408.0 28 38892.0 29 43183.0 30 50339.0 31 61211.0 32 75286.0 33 99036.0 34 178322.0 35 309211.0 36 112522.0 37 133219.0 38 196916.0 39 355905.0 40 140.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.69676301224353 24.501146083747972 28.970704981271318 14.831385922737184 2 29.716442108794094 25.867445630905127 31.518141667132554 12.897970593168223 3 28.05456476770839 25.204953318052215 33.245261922066305 13.495219992173086 4 24.835019846816124 28.08156761894113 32.15491697881143 14.928495555431317 5 22.29306200033544 31.61340638452507 32.341029798177445 13.75250181696204 6 21.37558003018952 40.32336333650137 28.06317437244926 10.237882260859843 7 87.26773634483143 3.7760384636887125 7.436070889472801 1.520154302007044 8 87.20914630737407 3.007491474255046 7.283781517303069 2.499580701067815 9 83.16570693799966 5.0879409627103485 9.1998658243417 2.5464862749482866 10 50.70207413205121 26.318331749315142 13.830547324872814 9.149046793760832 11 46.57958293732879 18.483311902499022 22.84977916922905 12.087325990943143 12 42.89221222116621 20.058869570078826 23.773466763571307 13.275451445183654 13 20.202884776653434 42.35126069212277 24.098451389277127 13.347403141946664 14 13.75244591043775 43.92966959244144 27.300497568066195 15.017386929054622 15 12.161737574774977 24.997707832504055 49.59121149438139 13.249343098339574 16 13.601721920948176 20.9357634035892 48.70056465589535 16.761950019567283 17 14.400682059596354 21.571756023927993 28.345055067926427 35.68250684854923 18 20.432996030636772 24.788561525129982 35.705428523508694 19.07301392072455 19 26.46749035612456 27.3108402750601 26.352434729132888 19.86923463968245 20 30.36780902331302 23.720411472018785 27.50662492312853 18.405154581539666 21 19.739866942472187 29.910940906803823 30.030077710068763 20.319114440655227 22 21.022083077095097 24.474590484709566 28.02767372952423 26.475652708671106 23 17.008050539497958 31.503270531671046 26.03874322133393 25.449935707497062 24 19.116061944428914 24.4594398166266 40.05540336557276 16.369094873371722 25 15.66931290881646 25.72795885279812 36.26818359702577 22.334544641359646 26 14.797618382065187 37.90557388047185 28.108011404930956 19.188796332532007 27 15.947168334544642 36.918711913680326 30.050148152289374 17.083971599485658 28 14.048918208754962 30.063621624643595 39.85302174763795 16.034438418963493 29 13.959411863364455 24.37429418013082 40.297199083133 21.369094873371722 30 16.979258679487895 32.71336724995807 33.23503102812098 17.07234304243305 31 28.593000503158716 28.011013585285404 25.821043215743277 17.574942695812602 32 29.285570526080395 27.971543579135684 26.703080449488453 16.039805445295467 33 26.742494549113882 29.86235813719461 25.067982333538325 18.327164980153185 34 18.011852183149774 28.717560239279926 28.5087493710516 24.761838206518703 35 19.690445574998602 27.06982724883994 32.19913903952592 21.040588136635545 36 29.154357913568514 24.76105551517862 29.115167440040253 16.96941913121261 37 17.663051378095822 33.0863196735059 32.267512718734274 16.983116229664002 38 18.88097500978364 33.46413596466707 25.259406272712027 22.395482752837257 39 18.783082685749427 32.8358025381562 29.96371666573489 18.41739811035948 40 23.840610499245262 28.001174037010117 26.77967238776765 21.378543075976967 41 16.745066249231286 24.251858891932688 31.139486778107006 27.863588080729023 42 21.948621904176218 25.12886453849164 26.230055347459047 26.692458209873095 43 22.237994073908425 26.204114720187842 26.713311343433777 24.84457986246995 44 17.613294571476494 31.8273606529882 28.978196455526362 21.581148320008943 45 16.10091127634595 39.02342483367809 23.96578520713367 20.909878682842287 46 22.633141387599935 34.29960306367753 25.455246827304745 17.61200872141779 47 20.08654329960306 29.424945491138814 27.665790797786098 22.82272041147202 48 22.67289092637111 24.65242913848046 33.0343825124392 19.64029742270923 49 20.990160451724716 23.570693799966456 33.424721865041654 22.014423883267177 50 18.112987085592888 32.126013305752785 30.403086040140888 19.357913568513446 51 16.46950299099905 34.60362274277408 25.437636272152957 23.489237994073907 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 916.0 1 1658.0 2 2400.0 3 11334.5 4 20269.0 5 13994.5 6 7720.0 7 8141.5 8 8563.0 9 9899.0 10 11235.0 11 11670.5 12 12106.0 13 12094.5 14 12083.0 15 11429.5 16 10776.0 17 10167.5 18 9559.0 19 8499.0 20 7439.0 21 7297.5 22 7156.0 23 7665.0 24 8174.0 25 9576.0 26 12237.0 27 13496.0 28 18486.0 29 23476.0 30 28169.5 31 32863.0 32 37435.5 33 42008.0 34 47683.0 35 53358.0 36 53190.5 37 53023.0 38 65165.5 39 77308.0 40 107484.5 41 137661.0 42 170034.5 43 202408.0 44 205402.0 45 208396.0 46 201082.5 47 193769.0 48 178898.0 49 164027.0 50 149294.5 51 134562.0 52 114620.0 53 94678.0 54 79975.5 55 65273.0 56 56493.5 57 47714.0 58 40708.0 59 33702.0 60 31422.0 61 29142.0 62 23991.5 63 18841.0 64 15506.5 65 12172.0 66 10169.0 67 8166.0 68 6566.5 69 4967.0 70 4386.5 71 3806.0 72 2847.5 73 1889.0 74 1527.5 75 952.5 76 739.0 77 586.0 78 433.0 79 313.5 80 194.0 81 133.0 82 72.0 83 40.5 84 9.0 85 6.5 86 4.0 87 3.0 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1788700.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.154040667595215 #Duplication Level Percentage of deduplicated Percentage of total 1 78.03312178686853 14.166164663382213 2 9.478702625734986 3.441535058872689 3 3.423875918621328 1.8647154800235453 4 1.702746242072955 1.236468981007494 5 0.9325298072128038 0.8464592021942983 6 0.609860602334155 0.6642860505803017 7 0.40832493068875725 0.5188923178121687 8 0.3026999575848288 0.43961818720594625 9 0.23718060067960645 0.38752076432720123 >10 2.2972804889063925 9.800752277367646 >50 1.0062099646199145 13.306499662135904 >100 1.548446686461093 49.76877448558356 >500 0.016525911071772 1.8564519951695269 >1k 0.0018708578571817358 0.48935929681182344 >5k 3.1180964286362266E-4 0.3923931342393939 >10k+ 3.1180964286362266E-4 0.8201084432862576 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14488 0.809973723933583 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6932 0.38754402638787944 No Hit GAGCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCT 1827 0.10214121988036003 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.5906524291384805E-5 0.0 0.0 0.10309163079331359 0.0 2 5.5906524291384805E-5 0.0 0.0 0.3550064292502935 0.0 3 5.5906524291384805E-5 0.0 0.0 0.5482752837256107 0.0 4 5.5906524291384805E-5 0.0 0.0 1.0064851568178006 0.0 5 5.5906524291384805E-5 0.0 0.0 1.6292279308995359 0.0 6 5.5906524291384805E-5 0.0 0.0 2.3097780510985633 0.0 7 5.5906524291384805E-5 0.0 0.0 2.6412478336221836 0.0 8 5.5906524291384805E-5 0.0 0.0 3.556437636272153 0.0 9 5.5906524291384805E-5 0.0 0.0 3.805053949795941 0.0 10 5.5906524291384805E-5 0.0 0.0 4.2973108961815845 0.0 11 5.5906524291384805E-5 0.0 0.0 4.986694247218651 0.0 12 5.5906524291384805E-5 0.0 0.0 5.495946776988875 0.0 13 5.5906524291384805E-5 0.0 0.0 5.695700788281992 0.0 14 5.5906524291384805E-5 0.0 0.0 5.767149326326383 0.0 15 5.5906524291384805E-5 0.0 0.0 5.887180633979986 0.0 16 5.5906524291384805E-5 0.0 0.0 6.169452675127188 0.0 17 5.5906524291384805E-5 0.0 0.0 6.501201990272265 0.0 18 5.5906524291384805E-5 0.0 0.0 6.908313300162129 0.0 19 5.5906524291384805E-5 0.0 0.0 7.112931179068597 0.0 20 5.5906524291384805E-5 0.0 0.0 7.321630234248337 0.0 21 5.5906524291384805E-5 0.0 0.0 7.6260971655392185 0.0 22 5.5906524291384805E-5 0.0 0.0 7.914463017834181 0.0 23 5.5906524291384805E-5 0.0 0.0 8.235254654218148 0.0 24 5.5906524291384805E-5 0.0 0.0 8.471795158494997 0.0 25 5.5906524291384805E-5 0.0 0.0 8.669201095767876 0.0 26 5.5906524291384805E-5 0.0 0.0 8.846145245150108 0.0 27 5.5906524291384805E-5 0.0 0.0 9.023983898921005 0.0 28 5.5906524291384805E-5 0.0 0.0 9.204170626712138 0.0 29 1.1181304858276961E-4 0.0 0.0 9.398222172527534 0.0 30 1.1181304858276961E-4 0.0 0.0 9.642477777156595 0.0 31 1.1181304858276961E-4 0.0 0.0 9.890087773243138 0.0 32 1.1181304858276961E-4 0.0 0.0 10.098451389277129 0.0 33 1.1181304858276961E-4 0.0 0.0 10.302398389892101 0.0 34 1.1181304858276961E-4 0.0 0.0 10.522334656454408 0.0 35 1.1181304858276961E-4 0.0 0.0 10.799127858221054 0.0 36 1.1181304858276961E-4 0.0 0.0 11.025493375076872 0.0 37 1.1181304858276961E-4 0.0 0.0 11.256946385643204 0.0 38 1.1181304858276961E-4 0.0 0.0 11.47962207189579 0.0 39 1.1181304858276961E-4 0.0 0.0 11.688656566221278 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGGGTA 60 0.0 45.000004 5 CTAACCG 35 1.2124292E-7 45.000004 1 GCCGAAC 30 2.1661817E-6 45.000004 12 CTCGAAT 35 1.2124292E-7 45.000004 16 CTCGAAG 30 2.1661817E-6 45.000004 1 CGCGTCA 30 2.1661817E-6 45.000004 39 GCTCGAA 35 1.2124292E-7 45.000004 15 TAAGCGA 35 1.2124292E-7 45.000004 28 GGTACGA 25 3.8916794E-5 45.0 8 CGAACTA 40 6.8193913E-9 45.0 34 AAATCGT 55 1.8189894E-12 45.0 12 GTCGAAT 25 3.8916794E-5 45.0 17 GTCGAAC 25 3.8916794E-5 45.0 39 ATAGGCC 20 7.0343417E-4 45.0 4 CGAAACG 20 7.0343417E-4 45.0 41 CGTTGCC 20 7.0343417E-4 45.0 38 GGTCCGT 25 3.8916794E-5 45.0 8 CTAAGCG 40 6.8193913E-9 45.0 1 CACGAAA 40 6.8193913E-9 45.0 25 GTAGCTA 55 1.8189894E-12 45.0 27 >>END_MODULE