##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547593_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 5036754 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.410774876041195 31.0 31.0 33.0 30.0 34.0 2 31.83154527697799 31.0 31.0 34.0 30.0 34.0 3 31.89820547122214 31.0 31.0 34.0 30.0 34.0 4 35.722582043911615 37.0 35.0 37.0 33.0 37.0 5 35.66694760157038 37.0 35.0 37.0 33.0 37.0 6 35.71928269675271 37.0 35.0 37.0 33.0 37.0 7 36.00105643436229 37.0 35.0 37.0 35.0 37.0 8 36.036836819904245 37.0 35.0 37.0 35.0 37.0 9 37.912385635669324 39.0 38.0 39.0 35.0 39.0 10 37.2369271955708 39.0 37.0 39.0 34.0 39.0 11 37.07021287916781 39.0 37.0 39.0 33.0 39.0 12 36.75696093158411 39.0 35.0 39.0 33.0 39.0 13 36.657996002981285 39.0 35.0 39.0 33.0 39.0 14 37.73895230936432 40.0 36.0 41.0 33.0 41.0 15 37.88321407001414 40.0 36.0 41.0 33.0 41.0 16 37.9133211588257 40.0 36.0 41.0 33.0 41.0 17 37.80676225203772 40.0 36.0 41.0 33.0 41.0 18 37.66930467519359 39.0 36.0 41.0 33.0 41.0 19 37.596250680497796 39.0 36.0 41.0 33.0 41.0 20 37.436691766165275 39.0 35.0 41.0 32.0 41.0 21 37.29767306483501 39.0 35.0 41.0 32.0 41.0 22 37.258772812807614 39.0 35.0 41.0 32.0 41.0 23 37.16650981961795 39.0 35.0 41.0 32.0 41.0 24 37.085053389544136 39.0 35.0 41.0 32.0 41.0 25 36.987330332194105 39.0 35.0 41.0 32.0 41.0 26 36.90513235309884 39.0 35.0 41.0 32.0 41.0 27 36.84218665434127 38.0 35.0 40.0 31.0 41.0 28 36.829083969556585 39.0 35.0 40.0 31.0 41.0 29 36.83486050738233 39.0 35.0 41.0 31.0 41.0 30 36.80987973603634 39.0 35.0 41.0 31.0 41.0 31 36.717237331821245 39.0 35.0 41.0 31.0 41.0 32 36.56168556177252 39.0 35.0 41.0 30.0 41.0 33 36.37472725489472 39.0 35.0 41.0 30.0 41.0 34 36.18334963351396 39.0 35.0 41.0 30.0 41.0 35 35.96252229114227 39.0 35.0 41.0 29.0 41.0 36 35.86442538190271 39.0 35.0 41.0 28.0 41.0 37 35.82382026201796 39.0 35.0 41.0 28.0 41.0 38 35.71471348412092 39.0 35.0 41.0 27.0 41.0 39 35.63134173318768 38.0 35.0 41.0 27.0 41.0 40 35.57201622314689 38.0 35.0 41.0 26.0 41.0 41 35.46689911796367 38.0 35.0 41.0 26.0 41.0 42 35.435052615235925 38.0 35.0 40.0 26.0 41.0 43 35.39767060293197 38.0 35.0 40.0 26.0 41.0 44 35.27502891743373 38.0 34.0 40.0 26.0 41.0 45 35.190796890219374 38.0 34.0 40.0 25.0 41.0 46 35.172894487203465 38.0 34.0 40.0 25.0 41.0 47 35.134580922554484 38.0 34.0 40.0 25.0 41.0 48 34.99602561490992 38.0 34.0 40.0 24.0 41.0 49 34.91484972265868 38.0 34.0 40.0 24.0 41.0 50 34.84239393069425 38.0 34.0 40.0 24.0 41.0 51 34.450776829680386 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 6.0 11 10.0 12 5.0 13 12.0 14 27.0 15 72.0 16 233.0 17 614.0 18 1392.0 19 2845.0 20 5227.0 21 8607.0 22 14085.0 23 21748.0 24 34625.0 25 54979.0 26 76276.0 27 88107.0 28 90914.0 29 95741.0 30 109013.0 31 131177.0 32 164004.0 33 213138.0 34 336595.0 35 458108.0 36 381615.0 37 502519.0 38 795732.0 39 1448932.0 40 395.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.41463728425093 23.007377370425477 29.308558647096923 16.269426698226674 2 32.5623804537605 24.956847207546765 29.6207041280952 12.86006821059754 3 27.36379422143706 24.71137164928047 34.38879484683985 13.536039282442621 4 24.5202564985306 27.30951323014783 34.11895836088084 14.051271910440732 5 22.54162105197117 31.612324127801354 32.444725313167964 13.401329507059506 6 20.16961717804761 40.3891673089454 29.06421477006818 10.377000742938804 7 88.112006264352 2.5710407933363433 8.062851590528345 1.254101351783311 8 89.1708231134576 1.846129471481037 7.724300213987025 1.2587472010743428 9 85.19836386688728 3.6344240755057724 9.045885504831087 2.1213265527758556 10 34.68485854183071 31.537196376872885 18.83796588040631 14.939979200890097 11 28.1925422603526 28.310912146989907 27.65163833691302 15.844907255744472 12 27.991480227146294 23.311879039556032 30.95118403638534 17.74545669691234 13 22.26652324096035 25.873906091105503 32.42368001296072 19.43589065497342 14 17.96067467261653 29.66035267952336 33.09822159271626 19.28075105514385 15 18.24631498778777 26.91666100826048 37.9190843944334 16.917939609518353 16 22.11819358261293 25.429294343142427 35.25091755523498 17.201594519009664 17 22.039174436551797 25.569523546315743 31.17587239718279 21.215429619949674 18 22.4663344685883 26.281589293421913 33.06365567982871 18.18842055816107 19 24.21041408812104 27.270956651843626 30.50081461195047 18.017814648084858 20 25.534977487484994 27.4839509731863 30.15630701836937 16.82476452095933 21 23.872458333283696 26.412109862820383 32.27870569021239 17.436726113683534 22 23.34503531441083 23.550624072567373 32.797948837683954 20.306391775337847 23 21.173160333024008 26.257168803558802 32.465452948466414 20.10421791495078 24 20.471319425169465 26.12676735850113 35.04121900732098 18.36069420900842 25 20.534931823154356 27.719042859746573 32.27036698635669 19.47565833074238 26 20.034510321528508 29.685309228920055 30.90091356456956 19.379266884981874 27 18.897944985996933 29.76651232122911 32.10587612577466 19.229666566999303 28 18.067251249515063 29.12516672444197 33.97309060557653 18.834491420466435 29 19.211678791539157 26.54304736741163 34.33806773171769 19.907206109331526 30 20.545116954292386 27.590150323005652 33.42378841611085 18.44094430659111 31 22.57418170512199 27.125684518243297 31.437290763058908 18.862843013575805 32 23.20828057117739 27.28795172446381 30.950151625431776 18.553616078927025 33 22.803575477380868 27.491594785054023 30.591249840671193 19.113579896893913 34 20.16461395573419 27.94535925320157 31.681237558951658 20.208789232112586 35 20.787217322902805 28.24408339180353 31.30825924792039 19.660440037373274 36 22.838359784893207 28.453226026127144 29.704091166652173 19.004323022327473 37 21.080402179657774 29.74784950783779 30.337773097514788 18.833975214989653 38 21.401184175363735 29.167436011367638 29.3560694050176 20.075310408251028 39 20.92091454138916 28.97314421152989 29.551056096843325 20.554885150237634 40 22.114401457764266 27.77463421878456 29.767624148409872 20.343340175041305 41 20.259933282427532 26.984442758173223 30.639495198693446 22.116128760705802 42 20.88333081186812 27.913136119016336 29.95224702258637 21.251286046529174 43 20.94193998753959 27.323669172645715 30.383814655232317 21.350576184582373 44 20.66144187307937 28.881934674593996 29.767207213217084 20.689416239109555 45 19.785798552003932 29.69061026208546 29.024506656469622 21.499084529440985 46 20.919802714208398 29.005744572794306 29.78017191230701 20.294280800690288 47 20.400480150509633 28.51574645098808 30.47220491610271 20.611568482399576 48 20.74955417715457 27.877061297812045 31.157805205495443 20.21557931953794 49 21.166251121257858 26.832658493942724 30.987794917123214 21.013295467676205 50 20.055059270315763 28.86464179112182 30.741981839891324 20.338317098671087 51 19.920825992295832 29.223484013712003 29.684872439670468 21.17081755432169 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2220.0 1 4050.0 2 5880.0 3 41264.0 4 76648.0 5 54869.5 6 33091.0 7 32099.5 8 31108.0 9 31783.5 10 32459.0 11 32486.0 12 32513.0 13 31650.5 14 30788.0 15 29180.5 16 27573.0 17 27038.5 18 26504.0 19 25295.0 20 24086.0 21 25682.5 22 27279.0 23 31538.0 24 35797.0 25 43162.0 26 56913.5 27 63300.0 28 77294.5 29 91289.0 30 105486.0 31 119683.0 32 138061.5 33 156440.0 34 179557.0 35 202674.0 36 216496.0 37 230318.0 38 249070.5 39 267823.0 40 296039.0 41 324255.0 42 340994.0 43 357733.0 44 371890.0 45 386047.0 46 390865.5 47 395684.0 48 389701.5 49 383719.0 50 374555.5 51 365392.0 52 329327.5 53 293263.0 54 266826.0 55 240389.0 56 217627.5 57 194866.0 58 175948.5 59 157031.0 60 139730.5 61 122430.0 62 104406.5 63 86383.0 64 73333.5 65 60284.0 66 50076.5 67 39869.0 68 32188.5 69 24508.0 70 20089.5 71 15671.0 72 12292.5 73 8914.0 74 7407.5 75 4644.0 76 3387.0 77 2542.5 78 1698.0 79 1237.0 80 776.0 81 517.5 82 259.0 83 243.5 84 228.0 85 128.0 86 28.0 87 23.0 88 18.0 89 12.5 90 7.0 91 9.0 92 11.0 93 6.0 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 5036754.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.6379611676795 #Duplication Level Percentage of deduplicated Percentage of total 1 78.03095948072192 13.763070331977456 2 7.589693452911357 2.677334367940837 3 2.462989165124627 1.3032632175265058 4 1.3452023592387823 0.9490650789969796 5 0.8307411796560441 0.7326290333582783 6 0.603743382678729 0.6389281403358532 7 0.4443464671789179 0.548615601316813 8 0.39405270736248954 0.5560229080382852 9 0.30347598814095034 0.48174279247379215 >10 4.652783986015612 20.934129920339416 >50 2.1426534376670805 27.1250593419662 >100 1.196042072229408 28.81691888111058 >500 0.0018296943857685035 0.22253615147644193 >1k 0.0013722707892811947 0.36701421301241 >5k 0.0 0.0 >10k+ 1.1435589910676624E-4 0.8836700201300668 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 43811 0.8698260824332498 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9854056799279855E-5 0.0 0.0 0.02307041400076319 0.0 2 1.9854056799279855E-5 0.0 0.0 0.07492921036048217 0.0 3 1.9854056799279855E-5 0.0 0.0 0.14580819313391125 0.0 4 1.9854056799279855E-5 0.0 0.0 0.23668021110421514 0.0 5 1.9854056799279855E-5 0.0 0.0 0.41572409532012083 0.0 6 1.9854056799279855E-5 0.0 0.0 0.7512576552279504 0.0 7 1.9854056799279855E-5 0.0 0.0 0.9262711659136023 0.0 8 1.9854056799279855E-5 0.0 0.0 1.2981575038209132 0.0 9 1.9854056799279855E-5 0.0 0.0 1.5083126950412904 0.0 10 1.9854056799279855E-5 0.0 0.0 1.805329384758517 0.0 11 1.9854056799279855E-5 0.0 0.0 2.0828890988124495 0.0 12 1.9854056799279855E-5 0.0 0.0 2.2817473317140364 0.0 13 1.9854056799279855E-5 0.0 0.0 2.3906468332580864 0.0 14 1.9854056799279855E-5 0.0 0.0 2.460334572623559 0.0 15 1.9854056799279855E-5 0.0 0.0 2.5260515006291753 0.0 16 1.9854056799279855E-5 0.0 0.0 2.6408476570426114 0.0 17 1.9854056799279855E-5 0.0 0.0 2.7704152317147117 0.0 18 1.9854056799279855E-5 0.0 0.0 2.9265078262706496 0.0 19 1.9854056799279855E-5 0.0 0.0 3.034771997997123 0.0 20 1.9854056799279855E-5 0.0 0.0 3.1477614352418244 0.0 21 1.9854056799279855E-5 0.0 0.0 3.2967065693500217 0.0 22 1.9854056799279855E-5 0.0 0.0 3.4649498466671194 0.0 23 1.9854056799279855E-5 0.0 0.0 3.641492119726316 0.0 24 1.9854056799279855E-5 0.0 0.0 3.782773587909991 0.0 25 1.9854056799279855E-5 0.0 0.0 3.9096211568005903 0.0 26 1.9854056799279855E-5 0.0 0.0 4.029619076095438 0.0 27 1.9854056799279855E-5 0.0 0.0 4.163217024297792 0.0 28 1.9854056799279855E-5 0.0 0.0 4.2954053344673975 0.0 29 1.9854056799279855E-5 0.0 0.0 4.45191486421612 0.0 30 1.9854056799279855E-5 0.0 0.0 4.644876442248321 0.0 31 1.9854056799279855E-5 0.0 0.0 4.808751827069577 0.0 32 1.9854056799279855E-5 0.0 0.0 4.972547795663636 0.0 33 1.9854056799279855E-5 0.0 0.0 5.1340605477257775 0.0 34 1.9854056799279855E-5 0.0 0.0 5.313878740156855 0.0 35 1.9854056799279855E-5 0.0 0.0 5.499772273968512 0.0 36 1.9854056799279855E-5 0.0 0.0 5.673971768325393 0.0 37 1.9854056799279855E-5 0.0 0.0 5.863121367452133 0.0 38 1.9854056799279855E-5 0.0 0.0 6.079709273075477 0.0 39 1.9854056799279855E-5 0.0 0.0 6.422152044749455 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 28885 0.0 42.59304 1 TACGGGA 1900 0.0 39.19737 4 ATAGGGC 3360 0.0 38.638393 4 CGTTAGG 945 0.0 38.333336 2 GGGCGAT 7265 0.0 37.660015 7 ACGGGAT 2155 0.0 37.482597 5 AGGGCGA 3975 0.0 37.471695 6 CGTAAGG 890 0.0 37.415733 2 TATGGGC 2565 0.0 37.2807 4 TAGGGCA 4565 0.0 37.11391 5 GTACGGG 1850 0.0 36.851353 3 ATAGGGA 7250 0.0 36.837933 4 TAAGGGA 6475 0.0 36.833977 4 TAGGGAC 5170 0.0 36.774662 5 TACGGGT 790 0.0 36.74051 4 GTAGGGC 3060 0.0 36.617645 4 GACCGAT 2850 0.0 36.078945 9 AGGGATT 6865 0.0 36.05244 6 GTAGGGA 6685 0.0 36.013462 4 CGAGGGA 3425 0.0 36.0 4 >>END_MODULE