SRR1547592_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547592_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	3018922
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14863	0.4923280561736938	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	4336	0.14362742727370897	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTATCG	20	7.0351124E-4	45.0	24
GTCGTAA	20	7.0351124E-4	45.0	8
TATCTCG	60	3.6379788E-12	41.249996	34
CGTTTTT	8605	0.0	40.39802	1
TAACGGG	805	0.0	40.248447	3
CGTAAGG	535	0.0	39.532715	2
CGTTAGG	600	0.0	39.375	2
GGCGATA	885	0.0	38.898304	8
GGGCGAT	4310	0.0	38.578884	7
ACGCGAA	35	6.2516683E-6	38.571426	21
ATCGATT	35	6.2516683E-6	38.571426	23
CGTGAGT	300	0.0	38.25	32
ATAGGGA	4040	0.0	38.09406	4
GTAGGGC	1440	0.0	37.8125	4
CACGACC	275	0.0	37.636364	27
AGGGCGA	2360	0.0	37.372883	6
TAGGGAT	4665	0.0	37.33119	5
TAAGGGA	4070	0.0	36.81818	4
TATGGGA	3215	0.0	36.671852	4
AGGGATT	4695	0.0	36.565495	6