##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547592_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3018922 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.301470524909224 31.0 31.0 33.0 30.0 34.0 2 31.714060184396946 31.0 31.0 34.0 30.0 34.0 3 31.870857544514234 31.0 31.0 34.0 30.0 34.0 4 35.634512253049266 37.0 35.0 37.0 33.0 37.0 5 35.53535798540009 37.0 35.0 37.0 33.0 37.0 6 35.59082049817783 37.0 35.0 37.0 33.0 37.0 7 35.89265605404843 37.0 35.0 37.0 35.0 37.0 8 35.910465060044615 37.0 35.0 37.0 35.0 37.0 9 37.73903664950602 39.0 37.0 39.0 35.0 39.0 10 37.10569501298808 39.0 37.0 39.0 33.0 39.0 11 36.84183427064363 39.0 37.0 39.0 32.0 39.0 12 36.28764605379006 38.0 35.0 39.0 32.0 39.0 13 36.091074231132836 38.0 35.0 39.0 32.0 39.0 14 37.10887064985449 39.0 35.0 41.0 32.0 41.0 15 37.30603274943837 39.0 35.0 41.0 32.0 41.0 16 37.38761882552779 39.0 35.0 41.0 32.0 41.0 17 37.28288872650569 39.0 35.0 41.0 32.0 41.0 18 37.215201320206354 39.0 35.0 41.0 32.0 41.0 19 37.18703133105128 39.0 35.0 41.0 32.0 41.0 20 37.05182214048591 39.0 35.0 41.0 32.0 41.0 21 36.873005662286076 39.0 35.0 41.0 31.0 41.0 22 36.81397366344675 38.0 35.0 41.0 31.0 41.0 23 36.744312042510536 38.0 35.0 41.0 31.0 41.0 24 36.64612268882733 38.0 35.0 40.0 31.0 41.0 25 36.53437717171891 38.0 35.0 40.0 31.0 41.0 26 36.42579669166676 38.0 35.0 40.0 31.0 41.0 27 36.334958637553406 38.0 35.0 40.0 30.0 41.0 28 36.345527973230176 38.0 35.0 40.0 30.0 41.0 29 36.36738146927943 38.0 35.0 40.0 30.0 41.0 30 36.40101897299765 38.0 35.0 40.0 30.0 41.0 31 36.34796294836369 38.0 35.0 40.0 30.0 41.0 32 36.24589803910138 38.0 35.0 40.0 30.0 41.0 33 36.13511213605386 38.0 35.0 41.0 30.0 41.0 34 36.04127168572093 38.0 35.0 41.0 30.0 41.0 35 35.88533059151578 38.0 35.0 41.0 29.0 41.0 36 35.79744458452388 38.0 35.0 40.0 29.0 41.0 37 35.75912130223967 38.0 35.0 40.0 29.0 41.0 38 35.673812705329915 38.0 34.0 40.0 29.0 41.0 39 35.604402167396174 38.0 35.0 40.0 28.0 41.0 40 35.50788725246959 38.0 34.0 40.0 28.0 41.0 41 35.441707669161374 38.0 34.0 40.0 27.0 41.0 42 35.40943555348565 38.0 34.0 40.0 27.0 41.0 43 35.358828416235994 38.0 34.0 40.0 27.0 41.0 44 35.238835584357595 38.0 34.0 40.0 27.0 41.0 45 35.154840701415935 37.0 34.0 40.0 27.0 41.0 46 35.12285378688154 37.0 34.0 40.0 27.0 41.0 47 35.07503009352345 37.0 34.0 40.0 27.0 41.0 48 34.94222010373239 37.0 34.0 40.0 26.0 41.0 49 34.86861734089188 37.0 34.0 40.0 26.0 41.0 50 34.79269553834117 37.0 34.0 40.0 26.0 41.0 51 34.358579983186054 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 2.0 11 5.0 12 4.0 13 12.0 14 22.0 15 75.0 16 202.0 17 455.0 18 1043.0 19 2079.0 20 3750.0 21 6170.0 22 9658.0 23 13935.0 24 19938.0 25 28924.0 26 38960.0 27 47243.0 28 53613.0 29 61655.0 30 74009.0 31 91004.0 32 112944.0 33 146644.0 34 241020.0 35 352910.0 36 225049.0 37 288226.0 38 436236.0 39 762905.0 40 227.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.967363847095086 24.101517031576172 29.543260806340804 13.387858314987932 2 30.456732568777863 25.916734516492973 29.95009476892745 13.676438145801715 3 29.23977499253045 25.68430055496631 31.440494322145458 13.63543013035779 4 26.485613076455767 28.020896200696804 30.960091052369027 14.533399670478403 5 22.97452534381478 32.829698813020016 29.48035755809524 14.715418285069969 6 22.357815140636294 41.48464253134066 25.901364791803168 10.256177536219882 7 89.1519886900026 3.331056582448967 6.008932989987817 1.508021737560626 8 89.55998200682231 3.038170578769508 5.601535912487968 1.800311501920222 9 84.29840187987632 5.659536748547992 7.237417859752587 2.8046435118230946 10 41.921752201613685 32.50935267622019 14.184798414798394 11.384096707367728 11 35.76286502268028 23.60511467338341 24.437994754418963 16.19402554951734 12 34.73614091387588 21.168980185642425 26.852366506984943 17.24251239349675 13 23.90942859736025 30.593933861159712 27.43466045164466 18.06197708983538 14 18.889325394958863 32.54201334118603 29.163125115521364 19.405536148333745 15 17.72470438123277 26.315353626228173 38.398044070035596 17.561897922503462 16 20.722562557098197 23.780939023929733 37.07363091858617 18.4228675003859 17 20.643395225183028 24.311327023354696 29.1351018674878 25.91017588397448 18 22.63861073588519 25.512186137965802 32.23488384264317 19.614319283505836 19 25.815340707709574 27.011131788101846 27.49534436464407 19.678183139544515 20 28.04544138603117 25.832565399172285 27.426876216079783 18.69511699871676 21 24.217551828102877 27.30630337584078 29.140534270179884 19.335610525876458 22 23.712835243838697 24.30264842881002 28.917043898451166 23.067472428900118 23 21.736533769338855 27.843581251850825 28.158925603245134 22.260959375565186 24 21.711027976211376 25.047185717285842 34.38439283956326 18.857393466939524 25 20.318179800604323 27.438834126883705 31.16231555502262 21.080670517489356 26 19.960204337839798 31.715261275382407 27.567423073534197 20.757111313243602 27 19.495667658853062 31.996487487917875 28.737244619105763 19.770600234123307 28 18.39298928557942 28.290959488188168 34.34788974342497 18.96816148280744 29 18.636884291810123 25.79102739322182 33.6590677069497 21.913020608018357 30 20.049706484632594 29.001014269331897 31.2146852419506 19.7345940040849 31 25.487640952631434 27.499948657169675 27.081686774285657 19.93072361591323 32 26.135719968916053 27.10566884470682 27.746857984406354 19.01175320197077 33 24.940988869536874 27.612836635063776 26.444306941351915 21.001867554047436 34 20.175546105530383 27.975052021880657 29.130398201742214 22.719003670846746 35 20.805870439845748 26.99258212037277 29.986067874559197 22.21547956522229 36 25.29008699131677 27.29692916875626 27.73711940884859 19.675864431078377 37 20.664528596631513 30.6978451248492 28.858711818324558 19.778914460194734 38 21.11531864685474 30.5155283905977 26.76584555679146 21.603307405756095 39 20.967915037221896 29.468863388984545 28.292383837674507 21.270837736119052 40 23.192616437258067 27.379210194897386 27.988334908950947 21.439838458893608 41 19.25425698312179 26.0847083826611 29.469029011017838 25.192005623199275 42 21.477765904518233 25.835712217804897 27.7990951737077 24.887426703969165 43 21.34215458365602 26.136481830269215 28.760232957327155 23.761130628747612 44 19.94354276129029 28.68583553997089 28.854637516305488 22.515984182433332 45 19.253693868208586 31.90499787672553 26.792378206525374 22.048930048540505 46 21.111840584155537 30.814973026795656 27.01540483656086 21.057781552487942 47 20.864103146752385 27.89018729202013 28.80074410667119 22.444965454556296 48 22.0185880920408 26.480048176137043 30.6426598633552 20.858703868466957 49 20.895505084265178 26.09775939888477 30.78039114624359 22.226344370606462 50 19.914625154276923 29.426331650834303 29.646840825963704 21.012202368925067 51 19.50775806728362 30.091966602648228 27.48828886602569 22.911986464042464 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1641.0 1 3180.0 2 4719.0 3 15063.0 4 25407.0 5 18137.0 6 10867.0 7 10812.5 8 10758.0 9 11225.5 10 11693.0 11 11794.0 12 11895.0 13 11797.0 14 11699.0 15 11471.0 16 11243.0 17 11139.5 18 11036.0 19 11760.5 20 12485.0 21 12258.0 22 12031.0 23 14025.0 24 16019.0 25 17986.0 26 24990.0 27 30027.0 28 37486.0 29 44945.0 30 55925.0 31 66905.0 32 74900.5 33 82896.0 34 93104.5 35 103313.0 36 105389.0 37 107465.0 38 121850.5 39 136236.0 40 163219.5 41 190203.0 42 220530.0 43 250857.0 44 255709.0 45 260561.0 46 260886.0 47 261211.0 48 251867.0 49 242523.0 50 231834.0 51 221145.0 52 202989.5 53 184834.0 54 168444.0 55 152054.0 56 136915.5 57 121777.0 58 110155.0 59 98533.0 60 90707.5 61 82882.0 62 74369.0 63 65856.0 64 56272.5 65 46689.0 66 40107.5 67 33526.0 68 28135.0 69 22744.0 70 19097.5 71 15451.0 72 13032.5 73 10614.0 74 8766.0 75 5282.5 76 3647.0 77 2748.5 78 1850.0 79 1449.0 80 1048.0 81 693.0 82 338.0 83 319.0 84 300.0 85 189.0 86 78.0 87 52.5 88 27.0 89 17.5 90 8.0 91 9.0 92 10.0 93 5.5 94 1.0 95 2.0 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3018922.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.031559249192092 #Duplication Level Percentage of deduplicated Percentage of total 1 77.97459537272978 13.280289410224267 2 8.142071094846932 2.7734433252603963 3 2.807075347860519 1.4342661031209873 4 1.3793652363579751 0.9397096299722681 5 0.7788538547257178 0.6632547786611355 6 0.5572920075242643 0.5694931107150427 7 0.40710340764433867 0.48535240654897877 8 0.3237856305361564 0.4411659320410854 9 0.25707803311937966 0.39405957774646333 >10 4.06540545154177 17.96275889611735 >50 1.80711942380074 21.97878872005605 >100 1.4931468046360856 37.59435932529284 >500 0.006318519712320475 0.7440179714874171 >1k 5.923612230300446E-4 0.23920628417962386 >5k 0.0 0.0 >10k+ 1.9745374101001485E-4 0.4998345285760929 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14863 0.4923280561736938 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4336 0.14362742727370897 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.312440665906572E-5 0.0 0.0 0.028983855826682503 0.0 2 3.312440665906572E-5 0.0 0.0 0.10298378030303532 0.0 3 3.312440665906572E-5 0.0 0.0 0.16595327736191925 0.0 4 3.312440665906572E-5 0.0 0.0 0.3239898215323218 0.0 5 3.312440665906572E-5 0.0 0.0 0.5737809721483363 0.0 6 3.312440665906572E-5 0.0 0.0 0.9277483817071127 0.0 7 3.312440665906572E-5 0.0 0.0 1.0863149163840602 0.0 8 3.312440665906572E-5 0.0 0.0 1.5174290690518006 0.0 9 3.312440665906572E-5 0.0 0.0 1.6622489749652358 0.0 10 3.312440665906572E-5 0.0 0.0 1.9413221010678645 0.0 11 3.312440665906572E-5 0.0 0.0 2.2693862246192515 0.0 12 3.312440665906572E-5 0.0 0.0 2.5590591608527813 0.0 13 3.312440665906572E-5 0.0 0.0 2.6837063031108457 0.0 14 3.312440665906572E-5 0.0 0.0 2.735943492412192 0.0 15 3.312440665906572E-5 0.0 0.0 2.811964005694748 0.0 16 3.312440665906572E-5 0.0 0.0 2.965694376999472 0.0 17 3.312440665906572E-5 0.0 0.0 3.1373781767134097 0.0 18 3.312440665906572E-5 0.0 0.0 3.340132669873551 0.0 19 3.312440665906572E-5 0.0 0.0 3.469185358217271 0.0 20 3.312440665906572E-5 0.0 0.0 3.6090697275385053 0.0 21 3.312440665906572E-5 0.0 0.0 3.8030793773406533 0.0 22 3.312440665906572E-5 0.0 0.0 4.009775674893223 0.0 23 3.312440665906572E-5 0.0 0.0 4.225614308683696 0.0 24 3.312440665906572E-5 0.0 0.0 4.394615031458249 0.0 25 3.312440665906572E-5 0.0 0.0 4.540859286858024 0.0 26 3.312440665906572E-5 0.0 0.0 4.680644282959282 0.0 27 3.312440665906572E-5 0.0 0.0 4.821721130920243 0.0 28 3.312440665906572E-5 0.0 0.0 4.969224113773062 0.0 29 3.312440665906572E-5 0.0 0.0 5.136667989434639 0.0 30 3.312440665906572E-5 0.0 0.0 5.350949776112135 0.0 31 3.312440665906572E-5 0.0 0.0 5.546185028960669 0.0 32 3.312440665906572E-5 0.0 0.0 5.721578762220422 0.0 33 3.312440665906572E-5 0.0 0.0 5.89925807953965 0.0 34 3.312440665906572E-5 0.0 0.0 6.089160302916074 0.0 35 6.624881331813144E-5 0.0 0.0 6.306323912972909 0.0 36 6.624881331813144E-5 0.0 0.0 6.5089127840997545 0.0 37 6.624881331813144E-5 0.0 0.0 6.7160065745322335 0.0 38 6.624881331813144E-5 0.0 0.0 6.935058275768635 0.0 39 6.624881331813144E-5 0.0 0.0 7.218040081857033 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTATCG 20 7.0351124E-4 45.0 24 GTCGTAA 20 7.0351124E-4 45.0 8 TATCTCG 60 3.6379788E-12 41.249996 34 CGTTTTT 8605 0.0 40.39802 1 TAACGGG 805 0.0 40.248447 3 CGTAAGG 535 0.0 39.532715 2 CGTTAGG 600 0.0 39.375 2 GGCGATA 885 0.0 38.898304 8 GGGCGAT 4310 0.0 38.578884 7 ACGCGAA 35 6.2516683E-6 38.571426 21 ATCGATT 35 6.2516683E-6 38.571426 23 CGTGAGT 300 0.0 38.25 32 ATAGGGA 4040 0.0 38.09406 4 GTAGGGC 1440 0.0 37.8125 4 CACGACC 275 0.0 37.636364 27 AGGGCGA 2360 0.0 37.372883 6 TAGGGAT 4665 0.0 37.33119 5 TAAGGGA 4070 0.0 36.81818 4 TATGGGA 3215 0.0 36.671852 4 AGGGATT 4695 0.0 36.565495 6 >>END_MODULE