SRR1547591_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547591_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1754849
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12012	0.6845033390337288	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	4499	0.25637533485787095	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	2017	0.11493866423834757	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAC	180	0.0	45.0	25
AACGTAG	40	6.8193913E-9	45.0	1
TCGTTAG	105	0.0	45.0	1
CGTATCC	20	7.034304E-4	45.0	32
GGTCGTA	45	3.8562575E-10	45.0	8
CGACGAA	35	1.212411E-7	45.0	20
CGTGCCG	20	7.034304E-4	45.0	39
CTATACG	55	1.8189894E-12	45.0	1
CATCTCG	35	1.212411E-7	45.0	31
CCGCTCG	25	3.8916485E-5	45.0	19
TCTAGCG	90	0.0	45.0	1
CCGTCTA	25	3.8916485E-5	45.0	30
CCGTCCA	20	7.034304E-4	45.0	19
ACCTACG	20	7.034304E-4	45.0	1
TCGTGCA	35	1.212411E-7	45.0	20
CTACGTT	20	7.034304E-4	45.0	30
CGCTAAT	35	1.212411E-7	45.0	36
TGCGAAT	25	3.8916485E-5	45.0	15
TCGCTAA	35	1.212411E-7	45.0	35
CGAATTC	20	7.034304E-4	45.0	25