##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547591_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1754849 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.405328891545654 31.0 31.0 33.0 30.0 34.0 2 31.819998187878273 31.0 31.0 34.0 30.0 34.0 3 31.95296917284621 31.0 31.0 34.0 30.0 34.0 4 35.71766117768537 37.0 35.0 37.0 33.0 37.0 5 35.63728788060967 37.0 35.0 37.0 33.0 37.0 6 35.67828855930054 37.0 35.0 37.0 33.0 37.0 7 35.959464888431995 37.0 35.0 37.0 35.0 37.0 8 35.98808045592527 37.0 35.0 37.0 35.0 37.0 9 37.85215195153543 39.0 38.0 39.0 35.0 39.0 10 37.27094980821712 39.0 37.0 39.0 34.0 39.0 11 36.94940476360074 39.0 37.0 39.0 33.0 39.0 12 36.06270397054106 37.0 35.0 39.0 32.0 39.0 13 35.71633627736632 37.0 35.0 39.0 31.0 39.0 14 36.69535441510922 38.0 35.0 41.0 31.0 41.0 15 36.99377097402682 38.0 35.0 41.0 32.0 41.0 16 37.15418078706487 38.0 35.0 41.0 33.0 41.0 17 37.0681295085788 38.0 35.0 41.0 32.0 41.0 18 37.011033997796964 38.0 35.0 41.0 32.0 41.0 19 36.93941643981904 38.0 35.0 41.0 32.0 41.0 20 36.75248810581423 38.0 35.0 40.0 32.0 41.0 21 36.55112548145168 38.0 35.0 40.0 31.0 41.0 22 36.46172234762079 38.0 35.0 40.0 31.0 41.0 23 36.446896000738526 38.0 35.0 40.0 31.0 41.0 24 36.35209981029707 37.0 35.0 40.0 31.0 41.0 25 36.25813218117342 37.0 35.0 40.0 31.0 41.0 26 36.156440240727264 37.0 35.0 40.0 31.0 41.0 27 36.059559540450486 37.0 35.0 40.0 31.0 41.0 28 36.10171074548295 37.0 35.0 40.0 31.0 41.0 29 36.18134779687597 37.0 35.0 40.0 31.0 41.0 30 36.22605021856582 37.0 35.0 40.0 31.0 41.0 31 36.09968550000598 37.0 35.0 40.0 31.0 41.0 32 35.936650389862606 37.0 35.0 40.0 30.0 41.0 33 35.799267059445 37.0 35.0 40.0 30.0 41.0 34 35.7094576228496 37.0 35.0 40.0 30.0 41.0 35 35.54579054950027 37.0 35.0 40.0 30.0 41.0 36 35.385887902605866 37.0 34.0 40.0 29.0 41.0 37 35.34454018550884 37.0 34.0 40.0 29.0 41.0 38 35.28866301317093 37.0 34.0 40.0 29.0 41.0 39 35.2622510540793 37.0 34.0 40.0 29.0 41.0 40 35.13523442757753 36.0 34.0 40.0 27.0 41.0 41 35.11533869865726 36.0 34.0 40.0 28.0 41.0 42 35.07968491875939 36.0 34.0 40.0 27.0 41.0 43 35.02315355908115 36.0 34.0 40.0 27.0 41.0 44 34.89030794102513 36.0 34.0 40.0 27.0 41.0 45 34.80169404888968 36.0 34.0 40.0 27.0 41.0 46 34.77389906481982 36.0 34.0 40.0 27.0 41.0 47 34.73780821027906 35.0 34.0 40.0 27.0 41.0 48 34.629550462746366 35.0 34.0 40.0 26.0 41.0 49 34.59576635938477 36.0 34.0 40.0 26.0 41.0 50 34.50545659484092 35.0 34.0 40.0 26.0 41.0 51 34.0860165176605 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 1.0 12 1.0 13 2.0 14 9.0 15 32.0 16 69.0 17 238.0 18 525.0 19 1120.0 20 2052.0 21 3370.0 22 5170.0 23 8045.0 24 12117.0 25 17650.0 26 24234.0 27 28800.0 28 31867.0 29 35767.0 30 42856.0 31 52391.0 32 66587.0 33 89640.0 34 166645.0 35 282861.0 36 115913.0 37 139991.0 38 215263.0 39 411446.0 40 184.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.634345747126964 24.110678468631775 29.988449148616205 14.266526635625059 2 29.957905210077907 26.86989022987163 30.10834550437103 13.063859055679433 3 27.934426266875384 26.264311060381836 32.454587260784265 13.346675411958522 4 25.153047356211278 28.394408863668612 31.370334427634518 15.082209352485599 5 23.40184255169533 33.434101737528415 29.07651883438404 14.087536876392214 6 22.04052884322241 42.069431614913874 25.861712318267838 10.028327223595875 7 88.72398707809049 3.654160557404084 6.45371767029528 1.1681346942101571 8 89.50114796201838 2.898824913140675 5.8461440272069 1.7538830976340414 9 84.84314034996744 5.592674925306964 7.332425752871045 2.2317589718545583 10 47.40476246104366 30.430082588302472 12.858941139665008 9.306213810988865 11 42.73997363875752 20.026566388333126 23.699304042684012 13.534155930225337 12 42.33674806208397 19.766771955877687 24.15848885003781 13.737991132000532 13 21.302573611746652 38.96244064304108 24.074379049137562 15.660606696074705 14 14.906581705890364 40.91109833381675 26.746232866759478 17.436087093533402 15 13.832244255773574 26.49384647909877 44.418636589245004 15.255272675882656 16 15.760102436164022 21.063635674636394 45.24879348593526 17.927468403264328 17 15.77343691679455 23.50128130682469 27.615310491102086 33.109971285278675 18 20.16817401383253 25.05543211980062 34.86339850323304 19.91299536313381 19 26.67158256921251 26.936847557824063 26.118315592965548 20.27325427999788 20 30.12954390947597 23.695315095486848 27.53188450972135 18.64325648531583 21 21.355398669629125 29.622206810956385 29.115553531956312 19.906840987458178 22 22.506551845771344 24.331894083194623 27.475355429441507 25.686198641592522 23 19.027278130483023 30.677454299486733 26.28112162356989 24.01414594646035 24 19.191109890366636 24.53664104432917 39.682274657249714 16.58997440805448 25 16.738249273869148 27.289755414853357 35.43387493738778 20.538120373889722 26 17.054173891884712 36.01409579969559 26.95474083525135 19.976989473168345 27 16.591000137333754 36.857701146936286 28.557499819072753 17.993798896657207 28 14.51207482809062 29.978818690383047 38.37310218713974 17.136004294386584 29 14.884528526386031 24.513847060345363 37.86473935934089 22.736885053927715 30 16.49429666028245 33.12695280334662 32.35845363333256 18.02029690303838 31 27.28388596397753 28.928186983609415 25.336367972401042 18.45155908001201 32 27.984060167000123 28.145270618725597 26.060076963886917 17.810592250387355 33 25.696057039665522 30.378682154418986 24.438854853038638 19.486405952876858 34 18.01699177536073 28.64548459725025 28.32847726499545 25.009046362393573 35 18.9849383052331 26.777232684977452 32.09563899799926 22.142190011790188 36 27.549606832268758 27.492336947509443 27.62625160341431 17.331804616807485 37 18.402779954286665 33.307652111378246 30.695404561873985 17.594163372461104 38 18.19393007603503 33.42430032441538 26.763271369787372 21.61849822976222 39 18.977017395798725 33.7291698601988 28.16430359535208 19.1295091486504 40 23.658559796312957 27.894137900184003 27.32656769898721 21.12073460451583 41 16.646503488334325 25.63229086947082 30.621893963526208 27.09931167866865 42 20.681836442907624 25.44794452400178 26.676369305849107 27.19384972724149 43 21.21880572060616 26.83666799821523 26.824188291984097 25.120337989194514 44 17.81577788174367 30.3437503739638 29.00346411571594 22.83700762857659 45 16.258891790689685 38.08185205678665 24.050616320834443 21.60863983168922 46 21.137887077463645 34.777807093373845 25.546186594971985 18.53811923419052 47 20.091643212606897 28.761733915567667 28.09426907956183 23.05235379226361 48 21.277728169204302 25.16182304004504 33.05224552083968 20.50820326991097 49 20.006678637307253 25.544989910812838 32.36779916676591 22.08053228511399 50 18.113410327612232 31.815728874678108 30.22670326620695 19.84415753150271 51 17.12369554303533 33.19049103370148 26.165100245092315 23.520713178170887 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1000.0 1 1918.5 2 2837.0 3 10503.0 4 18169.0 5 12801.0 6 7433.0 7 7395.0 8 7357.0 9 7839.5 10 8322.0 11 8416.5 12 8511.0 13 8374.0 14 8237.0 15 7642.5 16 7048.0 17 6884.5 18 6721.0 19 6713.0 20 6705.0 21 6908.5 22 7112.0 23 7902.0 24 8692.0 25 11194.0 26 14751.5 27 15807.0 28 22788.0 29 29769.0 30 32485.0 31 35201.0 32 38582.5 33 41964.0 34 50421.5 35 58879.0 36 61516.0 37 64153.0 38 72167.5 39 80182.0 40 107775.5 41 135369.0 42 162214.5 43 189060.0 44 191717.5 45 194375.0 46 186503.0 47 178631.0 48 159479.0 49 140327.0 50 128345.5 51 116364.0 52 102299.5 53 88235.0 54 77643.5 55 67052.0 56 60368.5 57 53685.0 58 47200.5 59 40716.0 60 37252.5 61 33789.0 62 29639.0 63 25489.0 64 21952.5 65 18416.0 66 15647.0 67 12878.0 68 10225.5 69 7573.0 70 6760.0 71 5947.0 72 4893.5 73 3840.0 74 3175.0 75 1969.0 76 1428.0 77 1173.5 78 919.0 79 562.5 80 206.0 81 152.5 82 99.0 83 87.0 84 75.0 85 65.5 86 56.0 87 32.5 88 9.0 89 4.5 90 0.0 91 1.5 92 3.0 93 3.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1754849.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.251250594433824 #Duplication Level Percentage of deduplicated Percentage of total 1 79.27594101599156 12.883331835604336 2 8.23794387189167 2.6775378048998393 3 2.7582947655354073 1.3447721834409299 4 1.30980259291925 0.851437206670797 5 0.7424213137753718 0.6032637408406175 6 0.48768378904874965 0.47552828800045394 7 0.36354220522567443 0.4135610835142868 8 0.262933149894818 0.34183940068196145 9 0.20248789959351848 0.29616134387713416 >10 2.9961480437833523 12.390615861554048 >50 1.5545460422619448 18.3434403101108 >100 1.7972553268345288 47.1477733200991 >500 0.008516116060025397 0.8660225826635906 >1k 0.002129029015006349 0.6720353694474287 >5k 0.0 0.0 >10k+ 3.548381691677249E-4 0.6926796685946898 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12012 0.6845033390337288 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4499 0.25637533485787095 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2017 0.11493866423834757 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.036242434534253375 0.0 2 0.0 0.0 0.0 0.14417194869758024 0.0 3 0.0 0.0 0.0 0.21283882544879928 0.0 4 0.0 0.0 0.0 0.45553776991638595 0.0 5 0.0 0.0 0.0 0.7451923213906154 0.0 6 0.0 0.0 0.0 1.1369069361523414 0.0 7 0.0 0.0 0.0 1.3005107561961171 0.0 8 0.0 0.0 0.0 1.77177637506133 0.0 9 0.0 0.0 0.0 1.9043803768871281 0.0 10 0.0 0.0 0.0 2.1598439523856467 0.0 11 0.0 0.0 0.0 2.516056937092593 0.0 12 0.0 0.0 0.0 2.7952832408942307 0.0 13 0.0 0.0 0.0 2.910221905132578 0.0 14 0.0 0.0 0.0 2.95136504622335 0.0 15 0.0 0.0 0.0 3.0195190583349336 0.0 16 0.0 0.0 0.0 3.184490517417738 0.0 17 0.0 0.0 0.0 3.367127314087993 0.0 18 0.0 0.0 0.0 3.6047545971191823 0.0 19 0.0 0.0 0.0 3.72561969719332 5.6984959959517884E-5 20 0.0 0.0 0.0 3.859363398218308 5.6984959959517884E-5 21 0.0 0.0 0.0 4.0470148713650005 5.6984959959517884E-5 22 0.0 0.0 0.0 4.244410772664771 5.6984959959517884E-5 23 0.0 0.0 0.0 4.460725680671101 5.6984959959517884E-5 24 0.0 0.0 0.0 4.62854638775188 5.6984959959517884E-5 25 0.0 0.0 0.0 4.768387479492538 5.6984959959517884E-5 26 0.0 0.0 0.0 4.8971165040410884 5.6984959959517884E-5 27 0.0 0.0 0.0 5.019064318354457 5.6984959959517884E-5 28 0.0 0.0 0.0 5.1626094324924825 5.6984959959517884E-5 29 0.0 0.0 0.0 5.310827313347188 5.6984959959517884E-5 30 0.0 0.0 0.0 5.501214064571937 5.6984959959517884E-5 31 0.0 0.0 0.0 5.672909748929965 5.6984959959517884E-5 32 0.0 0.0 0.0 5.830416178258073 5.6984959959517884E-5 33 0.0 0.0 0.0 5.984788434788406 5.6984959959517884E-5 34 0.0 0.0 0.0 6.157566833385665 5.6984959959517884E-5 35 0.0 0.0 0.0 6.3780416434690395 5.6984959959517884E-5 36 0.0 0.0 0.0 6.564553417416541 5.6984959959517884E-5 37 0.0 0.0 0.0 6.747361168966675 5.6984959959517884E-5 38 0.0 0.0 0.0 6.9249263042005325 5.6984959959517884E-5 39 0.0 0.0 0.0 7.1049417927126495 5.6984959959517884E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 180 0.0 45.0 25 AACGTAG 40 6.8193913E-9 45.0 1 TCGTTAG 105 0.0 45.0 1 CGTATCC 20 7.034304E-4 45.0 32 GGTCGTA 45 3.8562575E-10 45.0 8 CGACGAA 35 1.212411E-7 45.0 20 CGTGCCG 20 7.034304E-4 45.0 39 CTATACG 55 1.8189894E-12 45.0 1 CATCTCG 35 1.212411E-7 45.0 31 CCGCTCG 25 3.8916485E-5 45.0 19 TCTAGCG 90 0.0 45.0 1 CCGTCTA 25 3.8916485E-5 45.0 30 CCGTCCA 20 7.034304E-4 45.0 19 ACCTACG 20 7.034304E-4 45.0 1 TCGTGCA 35 1.212411E-7 45.0 20 CTACGTT 20 7.034304E-4 45.0 30 CGCTAAT 35 1.212411E-7 45.0 36 TGCGAAT 25 3.8916485E-5 45.0 15 TCGCTAA 35 1.212411E-7 45.0 35 CGAATTC 20 7.034304E-4 45.0 25 >>END_MODULE