##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547590_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2270963 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.375379519613485 31.0 31.0 33.0 30.0 34.0 2 31.77427637526459 31.0 31.0 34.0 30.0 34.0 3 31.880442349787295 31.0 31.0 34.0 30.0 34.0 4 35.65654834534953 37.0 35.0 37.0 33.0 37.0 5 35.573226424208585 37.0 35.0 37.0 33.0 37.0 6 35.61674892985927 37.0 35.0 37.0 33.0 37.0 7 35.94902294753371 37.0 35.0 37.0 35.0 37.0 8 35.987178566977974 37.0 35.0 37.0 35.0 37.0 9 37.83571286718454 39.0 38.0 39.0 35.0 39.0 10 37.2500670420434 39.0 37.0 39.0 34.0 39.0 11 36.88579910813166 39.0 37.0 39.0 33.0 39.0 12 36.00659059614798 37.0 35.0 39.0 32.0 39.0 13 35.67376967392247 37.0 35.0 39.0 31.0 39.0 14 36.500936386898424 38.0 35.0 41.0 31.0 41.0 15 36.83208665222639 38.0 35.0 41.0 32.0 41.0 16 36.996377748118306 38.0 35.0 41.0 32.0 41.0 17 36.95520754851576 38.0 35.0 41.0 32.0 41.0 18 36.884731719539246 38.0 35.0 40.0 32.0 41.0 19 36.82248543899659 38.0 35.0 40.0 32.0 41.0 20 36.61939362288157 38.0 35.0 40.0 32.0 41.0 21 36.40861519980731 38.0 35.0 40.0 31.0 41.0 22 36.396894621356665 38.0 35.0 40.0 31.0 41.0 23 36.358995280856625 37.0 35.0 40.0 31.0 41.0 24 36.27398596982866 37.0 35.0 40.0 31.0 41.0 25 36.14581127037297 37.0 35.0 40.0 31.0 41.0 26 36.02437071850136 37.0 35.0 40.0 31.0 41.0 27 35.94753106941857 37.0 35.0 40.0 31.0 41.0 28 35.99931130538014 37.0 35.0 40.0 31.0 41.0 29 36.03908209865154 37.0 35.0 40.0 31.0 41.0 30 36.05855181260109 37.0 35.0 40.0 31.0 41.0 31 35.88720952300852 37.0 35.0 40.0 30.0 41.0 32 35.73221668516836 37.0 34.0 40.0 30.0 41.0 33 35.578046405863944 37.0 34.0 40.0 30.0 41.0 34 35.45736368227928 37.0 34.0 40.0 29.0 41.0 35 35.299463267345175 37.0 34.0 40.0 29.0 41.0 36 35.143880811796585 37.0 34.0 40.0 27.0 41.0 37 35.08184061122969 37.0 34.0 40.0 27.0 41.0 38 35.01073993719845 37.0 34.0 40.0 27.0 41.0 39 34.97371379454443 36.0 34.0 40.0 27.0 41.0 40 34.84804640146053 36.0 34.0 40.0 26.0 41.0 41 34.769798539210015 36.0 34.0 40.0 25.0 41.0 42 34.75327823482813 36.0 34.0 40.0 26.0 41.0 43 34.720138989494764 36.0 34.0 40.0 26.0 41.0 44 34.63239691707879 36.0 34.0 40.0 26.0 41.0 45 34.52482581178117 35.0 34.0 40.0 25.0 41.0 46 34.507344681529375 35.0 34.0 40.0 25.0 41.0 47 34.44677478232803 35.0 34.0 40.0 25.0 41.0 48 34.36116528538774 35.0 34.0 40.0 24.0 41.0 49 34.32502687186009 36.0 34.0 40.0 24.0 41.0 50 34.20497647914123 35.0 34.0 40.0 24.0 41.0 51 33.7651718676174 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 3.0 13 5.0 14 15.0 15 42.0 16 143.0 17 360.0 18 874.0 19 1675.0 20 3001.0 21 4857.0 22 7963.0 23 12194.0 24 17827.0 25 25925.0 26 34643.0 27 39924.0 28 43355.0 29 48747.0 30 57686.0 31 71511.0 32 90427.0 33 121057.0 34 216646.0 35 349581.0 36 156688.0 37 191441.0 38 284391.0 39 489804.0 40 175.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.646034743850954 23.94975171325997 29.29558958027938 13.108623962609695 2 30.721680626236537 26.489291106900463 29.910438875490264 12.878589391372735 3 29.4681155087071 24.85007461592285 32.08951444827591 13.592295427094145 4 25.80993173380632 28.948556185195446 30.837446492963554 14.404065588034678 5 23.21077005657952 32.577633365228756 30.173939425697384 14.037657152494337 6 21.993753310820125 40.36393371446386 27.59296386598989 10.04934910872612 7 87.73872581807805 3.7881286485072634 7.143357245362431 1.3297882880522491 8 88.35071289140333 2.9803215640237206 6.70407223719629 1.9648933073766504 9 84.02849363904211 5.076128497029674 8.494546146282437 2.400831717645774 10 50.03701073069002 26.70320916721232 13.638839558372373 9.620940543725283 11 43.603308376226295 21.369612803026733 22.289354780328875 12.737724040418097 12 39.61411964880097 21.904275851257815 24.711983418488103 13.76962108145311 13 22.549464698456116 37.843945498011195 26.135212242559653 13.471377560973034 14 16.281286837346094 39.758948076212604 29.31703422732999 14.64273085911131 15 14.808827796842133 25.365186486966103 45.91866974494961 13.907315971242157 16 18.32064194793134 22.115860099878333 43.084893941468884 16.478604010721444 17 18.868779456116194 22.04465682620104 28.363738202691984 30.722825514990777 18 23.262730392348974 24.172432575960066 34.752613759008845 17.812223272682118 19 28.60614637931133 26.503470113779926 26.531079546430302 18.35930396047844 20 29.668603143248042 26.438035318056702 27.22637929371813 16.66698224497713 21 22.084463727502385 28.58029831397517 30.892753426630026 18.44248453189242 22 22.566638029769752 23.905233154393095 29.20144449733439 24.326684318502767 23 18.840201271442997 29.758212705358915 28.329083300784735 23.072502722413354 24 20.524464731481753 25.396847064439182 37.40122582358233 16.67746238049673 25 18.47934114294244 26.39312045154412 35.15314868626217 19.97438971925126 26 17.10336099707481 35.281244124188724 27.423432261996343 20.19196261674012 27 17.232293084475618 35.54787110137858 30.94555041187373 16.274285402272078 28 15.24745229226544 29.99956406158973 37.55935257421631 17.193631071928518 29 16.083793527239326 26.77930023518657 37.135963906061 20.00094233151311 30 19.330389794990054 31.749922830094548 32.029099549398204 16.89058782551719 31 27.88284089172743 27.526208044781004 27.007529404926455 17.58342165856511 32 29.01632479261001 27.937883620296766 27.389217701917644 15.656573885175584 33 27.506877038507454 29.080438562847565 25.306092613574066 18.106591785070915 34 18.767060493720063 29.97195462893935 29.15247848599911 22.10850639134147 35 19.43919826082591 28.122915256655435 31.312046915779785 21.12583956673887 36 29.64011302694055 25.596454015323015 27.55179190502003 17.211641052716402 37 19.29908149097982 32.963769114688354 30.046372397965094 17.69077699636674 38 20.29865744179892 32.9001397204622 25.478838712916062 21.32236412482282 39 19.513880234948786 31.72667278154686 28.569686075907004 20.18976090759735 40 24.86112719581957 26.74763965771349 27.276534227990506 21.114698918476435 41 17.837851167104 25.181167636813107 29.39845343142975 27.582527764653147 42 21.62135622641144 25.38029021168553 27.50264975695333 25.495703804949706 43 21.53535746729471 25.85004687438765 28.154840039225647 24.45975561909199 44 19.29058289368871 30.946827403176535 28.883825936397905 20.878763766736842 45 17.35466407863096 36.93600468171432 24.431045331870223 21.278285907784493 46 21.995866951597186 32.88199763712575 26.052648149705654 19.069487261571414 47 19.46760030876769 29.182157525243696 28.64855129740115 22.70169086858747 48 22.20758330276627 26.990664312892815 31.1273235187011 19.67442886563982 49 21.452705306075 25.428683778643684 31.85723413371332 21.261376781567996 50 19.11669190559247 32.4229412808575 28.49443165740701 19.96593515614301 51 17.9590772725051 34.057225943355306 25.572763624946777 22.41093315919282 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1332.0 1 2344.0 2 3356.0 3 12286.5 4 21217.0 5 15189.5 6 9162.0 7 9612.5 8 10063.0 9 11333.0 10 12603.0 11 13674.0 12 14745.0 13 14095.0 14 13445.0 15 13072.0 16 12699.0 17 11645.0 18 10591.0 19 10642.0 20 10693.0 21 11130.0 22 11567.0 23 12267.5 24 12968.0 25 14915.5 26 18996.0 27 21129.0 28 26365.5 29 31602.0 30 35092.0 31 38582.0 32 47152.5 33 55723.0 34 62634.0 35 69545.0 36 76156.5 37 82768.0 38 92713.0 39 102658.0 40 134848.0 41 167038.0 42 193615.0 43 220192.0 44 226528.5 45 232865.0 46 223275.0 47 213685.0 48 202442.5 49 191200.0 50 182498.5 51 173797.0 52 155014.0 53 136231.0 54 119441.0 55 102651.0 56 90995.0 57 79339.0 58 69680.0 59 60021.0 60 49476.0 61 38931.0 62 35235.5 63 31540.0 64 26790.5 65 22041.0 66 18769.5 67 15498.0 68 11851.0 69 8204.0 70 7032.0 71 5860.0 72 4757.0 73 3654.0 74 3023.5 75 1932.0 76 1471.0 77 987.0 78 503.0 79 356.0 80 209.0 81 196.0 82 183.0 83 134.0 84 85.0 85 56.5 86 28.0 87 26.5 88 25.0 89 14.0 90 3.0 91 4.0 92 5.0 93 2.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2270963.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.85786703017108 #Duplication Level Percentage of deduplicated Percentage of total 1 78.57364035786296 14.031576215872008 2 8.85204907405798 3.1615743061815285 3 3.143012114851823 1.6838247726372195 4 1.5229050939451843 1.087833466689732 5 0.8709795456385757 0.7776918456006255 6 0.6215865340668403 0.6660125803866324 7 0.45835723228191805 0.5729697754485411 8 0.34994178388987496 0.4999371076005001 9 0.2955279451225826 0.47497488729288984 >10 2.675903113447362 11.022825257063818 >50 1.0663226681984086 13.936307869138354 >100 1.5600445291828458 49.94467452943724 >500 0.007983595859448099 0.8866962519598336 >1k 0.0012474368530387653 0.36489007655265987 >5k 2.494873706077531E-4 0.26749694989281686 >10k+ 2.494873706077531E-4 0.6207141082456236 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13932 0.6134842355423669 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6004 0.26438123386422413 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.403418285546704E-5 0.0 0.0 0.041788439529838226 0.0 2 4.403418285546704E-5 0.0 0.0 0.14192217134317028 0.0 3 4.403418285546704E-5 0.0 0.0 0.2267320075227998 0.0 4 4.403418285546704E-5 0.0 0.0 0.45830777515970095 0.0 5 4.403418285546704E-5 0.0 0.0 0.7881238047471492 0.0 6 4.403418285546704E-5 0.0 0.0 1.21107213107391 0.0 7 4.403418285546704E-5 0.0 0.0 1.422920584791562 0.0 8 4.403418285546704E-5 0.0 0.0 1.9891561421300128 0.0 9 4.403418285546704E-5 0.0 0.0 2.165336907734736 0.0 10 4.403418285546704E-5 0.0 0.0 2.495769415882161 0.0 11 4.403418285546704E-5 0.0 0.0 2.9704138728812404 0.0 12 4.403418285546704E-5 0.0 0.0 3.3249330790506053 0.0 13 4.403418285546704E-5 0.0 0.0 3.4724916257992753 0.0 14 4.403418285546704E-5 0.0 0.0 3.527402251820043 0.0 15 4.403418285546704E-5 0.0 0.0 3.6122120879996724 0.0 16 4.403418285546704E-5 0.0 0.0 3.805654253283739 0.0 17 4.403418285546704E-5 0.0 0.0 4.023095048224035 0.0 18 4.403418285546704E-5 0.0 0.0 4.304825750133314 0.0 19 4.403418285546704E-5 0.0 0.0 4.465022107361502 0.0 20 4.403418285546704E-5 0.0 0.0 4.643492650474711 0.0 21 4.403418285546704E-5 0.0 0.0 4.878503084374338 0.0 22 4.403418285546704E-5 0.0 0.0 5.1269879782277386 0.0 23 4.403418285546704E-5 0.0 0.0 5.395024049268967 0.0 24 4.403418285546704E-5 0.0 0.0 5.586132402861693 0.0 25 4.403418285546704E-5 0.0 0.0 5.759891288409366 0.0 26 4.403418285546704E-5 0.0 0.0 5.91867855178618 0.0 27 4.403418285546704E-5 0.0 0.0 6.099570974956439 0.0 28 4.403418285546704E-5 0.0 0.0 6.26082415257316 0.0 29 4.403418285546704E-5 0.0 0.0 6.478529152610588 0.0 30 4.403418285546704E-5 0.0 0.0 6.7673493579595965 0.0 31 4.403418285546704E-5 0.0 0.0 7.016847038018673 0.0 32 4.403418285546704E-5 0.0 0.0 7.2178630827538806 0.0 33 4.403418285546704E-5 0.0 0.0 7.42389902433461 0.0 34 4.403418285546704E-5 0.0 0.0 7.681631096587659 0.0 35 4.403418285546704E-5 0.0 0.0 7.971860395788043 0.0 36 4.403418285546704E-5 0.0 0.0 8.194409155939573 0.0 37 4.403418285546704E-5 0.0 0.0 8.439415349347392 0.0 38 4.403418285546704E-5 0.0 0.0 8.737879040741747 0.0 39 4.403418285546704E-5 0.0 0.0 9.326219757873643 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAACT 20 7.0347416E-4 45.000004 28 CGCATCA 20 7.0347416E-4 45.000004 15 CTCGATG 55 1.8189894E-12 45.000004 1 ACGGTAC 20 7.0347416E-4 45.000004 25 ACGTTAT 25 3.8920127E-5 45.0 28 CGACCGG 25 3.8920127E-5 45.0 32 TCGATAG 70 0.0 45.0 1 GTAGCGT 25 3.8920127E-5 45.0 36 GTCGTAC 45 3.8562575E-10 45.0 26 TCGGTAA 35 1.2126293E-7 45.0 29 GCGTAAT 25 3.8920127E-5 45.0 39 ACTAACG 30 2.1664418E-6 44.999996 24 TTCGCGA 30 2.1664418E-6 44.999996 1 CGTTTTT 8455 0.0 42.684803 1 CGGTCTA 220 0.0 41.93182 31 GAATACG 65 0.0 41.538464 1 ACTACGG 65 0.0 41.538464 2 GTCCCAT 65 0.0 41.538464 44 GGCAACC 60 3.6379788E-12 41.249996 8 TCGATTG 60 3.6379788E-12 41.249996 1 >>END_MODULE