##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547587_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1745827 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.284684564965485 31.0 31.0 33.0 30.0 34.0 2 31.6997938512808 31.0 31.0 34.0 30.0 34.0 3 31.851100939554723 31.0 31.0 34.0 30.0 34.0 4 35.60970187767746 37.0 35.0 37.0 33.0 37.0 5 35.50682685054132 37.0 35.0 37.0 33.0 37.0 6 35.55209193121655 37.0 35.0 37.0 33.0 37.0 7 35.88088854164817 37.0 35.0 37.0 35.0 37.0 8 35.905081660439436 37.0 35.0 37.0 35.0 37.0 9 37.74947288591596 39.0 37.0 39.0 35.0 39.0 10 37.084604030067126 39.0 37.0 39.0 33.0 39.0 11 36.800577605913986 39.0 35.0 39.0 32.0 39.0 12 36.10789213364211 38.0 35.0 39.0 32.0 39.0 13 35.84109250229261 38.0 35.0 39.0 31.0 39.0 14 36.72008051198658 39.0 35.0 41.0 31.0 41.0 15 37.0009010056552 39.0 35.0 41.0 32.0 41.0 16 37.10740182160088 39.0 35.0 41.0 32.0 41.0 17 37.03422389503656 38.0 35.0 41.0 32.0 41.0 18 36.957672209216604 38.0 35.0 41.0 32.0 41.0 19 36.924068650559306 38.0 35.0 41.0 32.0 41.0 20 36.773068007311146 38.0 35.0 41.0 31.0 41.0 21 36.59518268419494 38.0 35.0 41.0 31.0 41.0 22 36.56202075005141 38.0 35.0 40.0 31.0 41.0 23 36.511865150441594 38.0 35.0 40.0 31.0 41.0 24 36.42231045802362 38.0 35.0 40.0 31.0 41.0 25 36.30444769155248 38.0 35.0 40.0 31.0 41.0 26 36.185221674312515 38.0 35.0 40.0 30.0 41.0 27 36.09904360512239 38.0 35.0 40.0 30.0 41.0 28 36.14417808866514 38.0 35.0 40.0 30.0 41.0 29 36.165571961024774 38.0 35.0 40.0 30.0 41.0 30 36.18528410890655 38.0 35.0 40.0 30.0 41.0 31 36.09967826136267 38.0 35.0 40.0 30.0 41.0 32 36.002665785326954 38.0 35.0 40.0 30.0 41.0 33 35.89191254345362 38.0 35.0 40.0 30.0 41.0 34 35.791628265572704 38.0 35.0 40.0 29.0 41.0 35 35.63566722246821 38.0 34.0 40.0 29.0 41.0 36 35.49879569968846 38.0 34.0 40.0 28.0 41.0 37 35.443373827990975 38.0 34.0 40.0 28.0 41.0 38 35.36758624995489 38.0 34.0 40.0 28.0 41.0 39 35.30418248772645 37.0 34.0 40.0 27.0 41.0 40 35.19872186648505 37.0 34.0 40.0 27.0 41.0 41 35.11811021366951 37.0 34.0 40.0 27.0 41.0 42 35.08540536948965 37.0 34.0 40.0 27.0 41.0 43 35.03037013403963 37.0 34.0 40.0 27.0 41.0 44 34.910956240223115 37.0 34.0 40.0 26.0 41.0 45 34.82323506280977 37.0 34.0 40.0 26.0 41.0 46 34.818229412192615 37.0 34.0 40.0 26.0 41.0 47 34.76415074345854 36.0 34.0 40.0 26.0 41.0 48 34.63771725377142 36.0 34.0 40.0 26.0 41.0 49 34.58292201919205 36.0 34.0 40.0 26.0 41.0 50 34.48545588995931 36.0 34.0 40.0 25.0 41.0 51 34.05440115200418 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 2.0 12 4.0 13 6.0 14 12.0 15 48.0 16 117.0 17 338.0 18 748.0 19 1382.0 20 2460.0 21 3988.0 22 6192.0 23 9024.0 24 13349.0 25 18419.0 26 24683.0 27 28969.0 28 32964.0 29 38170.0 30 45396.0 31 55248.0 32 68447.0 33 89274.0 34 151569.0 35 223787.0 36 125087.0 37 158925.0 38 237380.0 39 409699.0 40 138.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.14384930465619 24.26248419803337 29.822027039334365 13.771639457976075 2 30.587853206531918 26.088610154385282 30.05721643668015 13.266320202402643 3 29.138912389371914 25.645439095626315 31.157554557238488 14.058093957763285 4 25.80553514179813 28.369534896642108 30.60893204194917 15.21599791961059 5 23.16970696409209 32.46209389590148 30.2533985326152 14.114800607391226 6 22.146810651914535 41.379815984057984 26.252314805533423 10.221058558494054 7 89.65619159286688 3.2384079293080017 5.7566986877852155 1.3487017900399068 8 90.50272449675712 2.4254980590860376 5.363131627589675 1.7086458165671627 9 85.97850760699657 4.647654091728447 6.998345196860857 2.375493104414126 10 44.95749006058447 28.36363511390304 14.25313046481696 12.425744360695532 11 39.256409712989885 22.83399214240586 23.039052552171547 14.870545592432698 12 37.61747297985424 20.933975703205416 24.627354256750525 16.821197060189814 13 23.7064726344592 32.951260348247565 26.174930276596708 17.16733674069653 14 17.991874338064427 35.23063854551453 28.169916034062943 18.607571082358103 15 17.473552648687413 25.755186510461805 40.57618538377514 16.195075457075646 16 20.760648105453747 22.79366741378155 38.53085099497258 17.91483348579212 17 21.17122716053767 23.081496620226403 27.259802947256517 28.487473271979415 18 23.24262369639145 24.983689678301456 32.4744662558203 19.299220369486783 19 27.61848682601426 26.488535232872444 26.217202506319353 19.67577543479394 20 29.234912737630935 25.672990508223325 26.86423110651857 18.22786564762717 21 23.60835294676964 27.799432589827056 29.548517693906668 19.043696769496634 22 23.569460204247044 23.56499240760969 28.875541505544366 23.990005882598904 23 20.813459752885024 28.11275114888245 27.73877365855838 23.335015439674148 24 21.127981180265856 24.993484463237195 35.47430530058248 18.404229055914474 25 20.456150580784925 26.785128194259798 31.915533440598637 20.84318778435664 26 19.212556570610946 32.03759593590888 27.497627199029456 21.252220294450712 27 18.383264779385357 32.64745017690756 29.86028970797221 19.108995335734868 28 17.734804193084425 29.037928729478924 34.32928921365061 18.897977863786046 29 17.88436082154761 26.63058825416264 34.071531715341784 21.413519208947964 30 19.79067799959561 29.852442424134807 31.563379418464717 18.793500157804868 31 25.848609283737733 27.177148709465488 27.483880132452988 19.490361874343794 32 27.09764484109823 26.724297424658914 27.33168864956264 18.846369084680212 33 25.832971995507 28.06475097475294 26.033965564743816 20.068311464996246 34 19.977351707815263 27.75452550567725 29.598007133581966 22.670115652925517 35 20.82818057001066 27.73911733522279 30.04850996118172 21.38419213358483 36 27.109215288800094 26.42163284220029 27.31965996630823 19.14949190269139 37 20.952820640303994 30.818803925016624 29.33308970476456 18.89528572991482 38 21.249413601691348 29.877301702860592 27.40569369129931 21.46759100414875 39 20.457639846330707 29.932289969166476 28.764705781271573 20.845364403231248 40 24.646141914405035 26.223961480719453 27.44200885883882 21.68788774603669 41 18.966025843339576 24.966792242301214 29.685014609122213 26.382167305237004 42 21.827363192343803 25.83302927495107 27.035267526507496 25.304340006197634 43 21.87914380978184 25.775978948658718 28.469430247097794 23.87544699446165 44 20.480723462290364 28.607931942855735 29.002243635824172 21.909100959029733 45 18.328333792523544 33.05327503813379 25.793735576319992 22.824655593022676 46 21.524412212664828 30.936054947025106 26.803973131358376 20.73555970895169 47 20.43621733424904 28.37331533995064 28.576313689729854 22.61415363607047 48 21.66079456899223 26.28954644417803 31.274175505362216 20.77548348146752 49 21.673109649466987 25.459968255732097 30.77103286866339 22.095889226137526 50 19.865484953549235 31.02437984977893 28.668705433012548 20.441429763659286 51 18.917681992545653 31.66539410835094 26.83307108894524 22.583852810158167 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1006.0 1 1673.5 2 2341.0 3 7920.5 4 13500.0 5 9662.0 6 5824.0 7 5964.5 8 6105.0 9 6626.0 10 7147.0 11 7147.0 12 7147.0 13 7350.0 14 7553.0 15 7174.5 16 6796.0 17 6569.0 18 6342.0 19 6497.0 20 6652.0 21 6882.0 22 7112.0 23 7915.5 24 8719.0 25 9913.5 26 12659.5 27 14211.0 28 18579.5 29 22948.0 30 27529.0 31 32110.0 32 36842.0 33 41574.0 34 49340.0 35 57106.0 36 58126.5 37 59147.0 38 67440.0 39 75733.0 40 98186.0 41 120639.0 42 134804.5 43 148970.0 44 156533.0 45 164096.0 46 158913.5 47 153731.0 48 148856.5 49 143982.0 50 136712.0 51 129442.0 52 117710.0 53 105978.0 54 96437.0 55 86896.0 56 80030.0 57 73164.0 58 65833.0 59 58502.0 60 52374.5 61 46247.0 62 41585.0 63 36923.0 64 31619.0 65 26315.0 66 22120.5 67 17926.0 68 15063.5 69 12201.0 70 10465.5 71 8730.0 72 6797.0 73 4864.0 74 3970.0 75 2640.5 76 2205.0 77 1439.5 78 674.0 79 633.5 80 593.0 81 440.0 82 287.0 83 198.0 84 109.0 85 69.5 86 30.0 87 33.5 88 37.0 89 25.0 90 13.0 91 11.5 92 10.0 93 7.0 94 4.0 95 3.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1745827.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.700536466479722 #Duplication Level Percentage of deduplicated Percentage of total 1 77.7835577172438 14.545942575838481 2 7.337923527172434 2.7444621301625527 3 2.4809851709059205 1.391872609839648 4 1.2893389923769942 0.9644532337840082 5 0.8774987060131689 0.8204848275544019 6 0.6355931878546098 0.7131560152392736 7 0.48620884573699746 0.6364656375020816 8 0.39562912841909004 0.5918781554562227 9 0.3452998468455083 0.5811563140023862 >10 5.333855221357424 25.624857449648204 >50 2.1330924748362134 28.527966430930686 >100 0.8976042373696511 21.853935184815253 >500 0.0024821409951180755 0.32097610106254615 >1k 6.205352487795189E-4 0.21485439302867107 >5k 3.1026762438975944E-4 0.4675389411355742 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8058 0.4615577603050016 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2544 0.14571890571058874 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.023026336515588313 0.0 2 0.0 0.0 0.0 0.09617218659122583 0.0 3 0.0 0.0 0.0 0.15998148728367703 0.0 4 0.0 0.0 0.0 0.3417864427575012 0.0 5 0.0 0.0 0.0 0.5910665833441687 0.0 6 0.0 0.0 0.0 1.0213497671876997 0.0 7 0.0 0.0 0.0 1.2035556787700041 0.0 8 0.0 0.0 0.0 1.6635096146410842 0.0 9 0.0 0.0 0.0 1.840445817369075 0.0 10 0.0 0.0 0.0 2.1346330421055466 0.0 11 0.0 0.0 0.0 2.4783669859613813 0.0 12 0.0 0.0 0.0 2.732057643741333 0.0 13 0.0 0.0 0.0 2.863113011770353 0.0 14 0.0 0.0 0.0 2.921595324164422 0.0 15 0.0 0.0 0.0 2.9925645553654516 0.0 16 0.0 0.0 0.0 3.136164121645501 0.0 17 0.0 0.0 0.0 3.28978759063756 0.0 18 0.0 0.0 0.0 3.4825901993725608 0.0 19 0.0 0.0 0.0 3.6047672535709436 0.0 20 0.0 0.0 0.0 3.7337032821694245 0.0 21 0.0 0.0 0.0 3.9031931571684937 0.0 22 0.0 0.0 0.0 4.0813322282219255 0.0 23 0.0 0.0 0.0 4.271385423641632 0.0 24 0.0 0.0 0.0 4.4138966804843776 0.0 25 0.0 0.0 0.0 4.545238445733741 0.0 26 0.0 0.0 0.0 4.670623148799967 0.0 27 0.0 0.0 0.0 4.815139186185115 0.0 28 0.0 0.0 0.0 4.9526671313938895 0.0 29 0.0 0.0 0.0 5.11419516366742 0.0 30 0.0 0.0 0.0 5.329222196701048 0.0 31 5.7279444068627646E-5 0.0 0.0 5.506444796649381 0.0 32 1.1455888813725529E-4 0.0 0.0 5.668373785031392 0.0 33 1.1455888813725529E-4 0.0 0.0 5.829386302308304 0.0 34 1.1455888813725529E-4 0.0 0.0 6.007926329470217 0.0 35 1.1455888813725529E-4 0.0 0.0 6.2315452791141395 0.0 36 1.1455888813725529E-4 0.0 0.0 6.4102571446082575 0.0 37 1.7183833220588295E-4 0.0 0.0 6.610334242739974 0.0 38 1.7183833220588295E-4 0.0 0.0 6.844950845645073 0.0 39 1.7183833220588295E-4 0.0 0.0 7.287778227739633 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAAA 25 3.8916405E-5 45.0 18 TAGCACG 20 7.034295E-4 45.0 1 CGGTCGA 20 7.034295E-4 45.0 17 TAGTACG 65 0.0 41.538464 1 CGTTTTT 4845 0.0 40.309597 1 CGTTAGG 190 0.0 40.263157 2 TAGGTCG 45 1.9292202E-8 40.0 1 TGTACGA 45 1.9292202E-8 40.0 12 GTATGCG 40 3.4595905E-7 39.375 1 TCGTCCC 640 0.0 39.375 38 TAATGCG 80 0.0 39.375 1 GTACGCG 40 3.4595905E-7 39.375 1 GACCGAT 845 0.0 38.87574 9 GCGAATA 35 6.2501513E-6 38.57143 41 GCGATCG 35 6.2501513E-6 38.57143 9 AGGGTAC 610 0.0 38.360657 6 CGTAAGG 355 0.0 38.02817 2 GGGCGAT 2335 0.0 37.869377 7 TACGCGG 125 0.0 37.800003 2 CCAATCG 30 1.14016446E-4 37.500004 24 >>END_MODULE