##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547586_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1698261 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.280201335366 31.0 31.0 33.0 30.0 34.0 2 31.684351227520388 31.0 31.0 34.0 30.0 34.0 3 31.835064221577248 31.0 31.0 34.0 30.0 34.0 4 35.598646497799805 37.0 35.0 37.0 33.0 37.0 5 35.50383951583414 37.0 35.0 37.0 33.0 37.0 6 35.542059789396326 37.0 35.0 37.0 33.0 37.0 7 35.87599668131106 37.0 35.0 37.0 35.0 37.0 8 35.88935328550794 37.0 35.0 37.0 35.0 37.0 9 37.6986311291374 39.0 37.0 39.0 35.0 39.0 10 37.08912057687246 39.0 37.0 39.0 33.0 39.0 11 36.773150887878835 39.0 35.0 39.0 32.0 39.0 12 36.015344520070826 37.0 35.0 39.0 32.0 39.0 13 35.72389579693581 37.0 35.0 39.0 31.0 39.0 14 36.71693338067588 38.0 35.0 41.0 31.0 41.0 15 36.99413046640063 38.0 35.0 41.0 32.0 41.0 16 37.11044592085669 38.0 35.0 41.0 32.0 41.0 17 36.99962726577363 38.0 35.0 41.0 32.0 41.0 18 36.93467435217555 38.0 35.0 41.0 32.0 41.0 19 36.88450244102644 38.0 35.0 41.0 32.0 41.0 20 36.73307224272359 38.0 35.0 40.0 31.0 41.0 21 36.534419032174675 38.0 35.0 40.0 31.0 41.0 22 36.44098639726167 38.0 35.0 40.0 31.0 41.0 23 36.37790009898361 38.0 35.0 40.0 31.0 41.0 24 36.293033874062935 38.0 35.0 40.0 31.0 41.0 25 36.18960630904201 38.0 35.0 40.0 31.0 41.0 26 36.032643392270096 37.0 35.0 40.0 30.0 41.0 27 35.95433328563748 37.0 35.0 40.0 30.0 41.0 28 35.97443914686847 37.0 35.0 40.0 30.0 41.0 29 36.02812877408125 37.0 35.0 40.0 30.0 41.0 30 36.04954244371154 38.0 35.0 40.0 30.0 41.0 31 35.95780036166408 38.0 35.0 40.0 30.0 41.0 32 35.81444018322272 38.0 34.0 40.0 30.0 41.0 33 35.69108046407472 38.0 34.0 40.0 29.0 41.0 34 35.627424170960765 38.0 34.0 40.0 29.0 41.0 35 35.48432720294466 37.0 34.0 40.0 29.0 41.0 36 35.352865666702584 37.0 34.0 40.0 27.0 41.0 37 35.31116124082223 37.0 34.0 40.0 27.0 41.0 38 35.217047909596936 37.0 34.0 40.0 27.0 41.0 39 35.17291982798875 37.0 34.0 40.0 27.0 41.0 40 35.05441978588686 37.0 34.0 40.0 27.0 41.0 41 34.99384959084617 37.0 34.0 40.0 26.0 41.0 42 34.96190927071869 37.0 34.0 40.0 26.0 41.0 43 34.909037538988414 37.0 34.0 40.0 26.0 41.0 44 34.78157126613636 36.0 34.0 40.0 26.0 41.0 45 34.683696440064274 36.0 34.0 40.0 26.0 41.0 46 34.651002996594755 36.0 34.0 40.0 26.0 41.0 47 34.59789278562011 36.0 34.0 40.0 26.0 41.0 48 34.45854494686035 36.0 34.0 40.0 25.0 41.0 49 34.40396558597295 36.0 34.0 40.0 24.0 41.0 50 34.300151154622284 35.0 33.0 40.0 24.0 41.0 51 33.87174174052163 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 4.0 12 3.0 13 9.0 14 12.0 15 42.0 16 113.0 17 335.0 18 750.0 19 1410.0 20 2477.0 21 4089.0 22 6251.0 23 9317.0 24 13322.0 25 18253.0 26 23872.0 27 29080.0 28 33261.0 29 38347.0 30 45058.0 31 54612.0 32 67731.0 33 87858.0 34 151930.0 35 234418.0 36 120713.0 37 150320.0 38 224679.0 39 379852.0 40 141.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.54445459207978 23.562514831348068 28.790745356573577 13.102285219998574 2 30.498256746165637 26.67740706522731 29.30409401146231 13.520242177144738 3 29.446357185379636 26.026505937544346 30.79149789107799 13.73563898599803 4 26.15746342876625 28.904567672460242 30.183758562435337 14.754210336338172 5 24.02551786798378 33.14213775149992 28.678454018551918 14.153890361964386 6 22.861032550355922 41.652902586822634 25.27938873942227 10.20667612339917 7 88.82851340282795 3.872372974472122 5.890319568075815 1.4087940546241124 8 89.16103001835407 3.2757626772327693 5.575409197997246 1.987798106415916 9 83.77375444646023 6.130329790297251 7.404692211621182 2.6912235516213348 10 45.60794836600499 32.0530236518415 12.42735951658785 9.911668465565658 11 41.40005570404078 21.895456587650543 22.482763250171793 14.221724458136883 12 38.82259558454207 21.032220606844295 24.430755932097597 15.714427876516035 13 22.591403794823055 35.136354188196044 25.47123204266011 16.80100997432079 14 16.857126201449603 37.77116709386837 27.241042454605036 18.130664250076993 15 16.19698032281257 26.125018474780966 41.92747757853475 15.750523623871713 16 18.975705147795306 22.010692113874132 41.39622825937827 17.617374478952293 17 18.697656014004917 22.41875659866181 28.767545153542358 30.116042233790917 18 22.303933258786486 25.017768175798654 32.26206101417862 20.416237551236236 19 28.044511414912076 26.604096778999224 25.919631905814246 19.431759900274457 20 31.377980180902696 24.37805496328303 25.950663649462598 18.29330120635167 21 24.307747749020912 27.95524362862952 27.582862704849255 20.154145917500312 22 24.121027333254432 24.487343229338716 26.579660016923196 24.81196942048366 23 21.295725450917143 29.29137511842997 26.10641120534476 23.306488225308126 24 20.924698853709767 25.480888979962447 35.674257372688885 17.920154793638904 25 19.39213112707646 26.653029186915322 32.98179726202274 20.973042423985476 26 19.711163360637734 33.648479238468056 26.70949871662836 19.930858684265846 27 20.181409100250196 33.366602660015154 28.140491950295036 18.311496289439606 28 17.047438526822436 30.34992854455234 34.72293128088085 17.87970164774437 29 17.951422072343416 25.84561501441769 34.19038651891553 22.012576394323368 30 19.5293891810505 30.773361691754094 30.366062695898922 19.331186431296484 31 27.807327613364496 27.767875491458614 25.11704620196778 19.307750693209112 32 28.756298354610983 27.589222151365426 26.05465237675481 17.59982711726878 33 26.174009766461104 29.65174375434636 24.397251070359623 19.776995408832917 34 20.224806434346664 29.062022857499525 27.37070450301809 23.34246620513572 35 21.130792027844954 26.953925221152698 29.459959334872554 22.455323416129794 36 27.336434152347604 27.366641523299425 26.403067608571355 18.893856715781617 37 21.182668623962982 31.543561325379315 28.36183601931623 18.911934031341474 38 20.842026048999536 31.583602284925576 25.132297096853783 22.442074569221106 39 21.555461734091523 30.9514261942069 27.237215009942524 20.25589706175906 40 24.233318671276088 27.60800607209375 26.681587812474056 21.47708744415611 41 18.52347783997866 25.77201030936941 28.899915855101188 26.804595995550745 42 22.19511606284311 26.09027705399818 25.6602489252241 26.054357957934617 43 22.432535399446845 25.9377092213741 27.15978286023173 24.469972518947323 44 20.119816683065793 29.628896853899374 28.343287633644067 21.90799882939077 45 18.824609409272192 34.347135098786346 24.47279893962118 22.355456552320284 46 21.857476559845633 33.0110036089859 24.94993407962616 20.181585751542315 47 21.80259689176163 28.59866651827958 27.14818275871612 22.450553831242665 48 23.204972616105536 25.051037502480476 31.163819931094217 20.580169950319767 49 21.287952794064047 25.776721010492498 30.441080611284132 22.494245584159327 50 20.201665115079486 31.366144544330936 28.24995686764284 20.182233472946738 51 19.095239188793713 32.333840322541704 25.85974711778696 22.71117337087762 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1016.0 1 1947.5 2 2879.0 3 8280.0 4 13681.0 5 9958.0 6 6235.0 7 6276.0 8 6317.0 9 6681.0 10 7045.0 11 7219.5 12 7394.0 13 7446.0 14 7498.0 15 7100.5 16 6703.0 17 6686.5 18 6670.0 19 6486.0 20 6302.0 21 6712.5 22 7123.0 23 7194.5 24 7266.0 25 8934.0 26 12742.0 27 14882.0 28 19806.5 29 24731.0 30 27550.0 31 30369.0 32 34892.5 33 39416.0 34 43596.0 35 47776.0 36 50118.0 37 52460.0 38 61778.0 39 71096.0 40 92256.0 41 113416.0 42 135010.0 43 156604.0 44 159820.5 45 163037.0 46 152642.5 47 142248.0 48 138959.5 49 135671.0 50 129870.0 51 124069.0 52 115907.5 53 107746.0 54 97269.0 55 86792.0 56 78851.0 57 70910.0 58 65133.5 59 59357.0 60 53663.5 61 47970.0 62 41650.0 63 35330.0 64 29171.5 65 23013.0 66 20112.5 67 17212.0 68 14723.5 69 12235.0 70 10622.5 71 9010.0 72 7710.0 73 6410.0 74 5307.5 75 3555.0 76 2905.0 77 2142.5 78 1380.0 79 1078.5 80 777.0 81 543.0 82 309.0 83 212.5 84 116.0 85 68.5 86 21.0 87 31.5 88 42.0 89 25.5 90 9.0 91 6.0 92 3.0 93 1.5 94 0.0 95 0.5 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1698261.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.01872690307651 #Duplication Level Percentage of deduplicated Percentage of total 1 78.87021424092346 14.211408511943358 2 7.253083428212139 2.613826589963689 3 2.4338123181727593 1.3156259848349552 4 1.2171611801068658 0.8772677960548774 5 0.6959591976281025 0.6270149358872515 6 0.519912099074291 0.5620892476094944 7 0.4145963472938697 0.5229348849830913 8 0.32156550545982093 0.4635360819464217 9 0.26776649438450667 0.43423302024977356 >10 4.845309444810769 22.81246843371513 >50 2.053077759734754 26.569365661153306 >100 1.0995907405190628 27.24411002426229 >500 0.006294734579649533 0.7768288649883559 >1k 0.0013252072799262175 0.4932711066932134 >5k 3.313018199815544E-4 0.4760188557148352 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7974 0.46953913444399886 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4130 0.24318994547952288 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1743 0.10263440071932406 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.029500765783351323 0.0 2 0.0 0.0 0.0 0.09680490807950015 0.0 3 0.0 0.0 0.0 0.1532155540285033 0.0 4 0.0 0.0 0.0 0.35948537945580805 0.0 5 0.0 0.0 0.0 0.5950793193743482 0.0 6 0.0 0.0 0.0 1.0037326418024084 0.0 7 0.0 0.0 0.0 1.1614822456618858 0.0 8 0.0 0.0 0.0 1.605230291456967 0.0 9 0.0 0.0 0.0 1.743077183071389 0.0 10 0.0 0.0 0.0 1.993804250347856 0.0 11 0.0 0.0 0.0 2.3102455982914285 0.0 12 0.0 0.0 0.0 2.5716895106229254 0.0 13 0.0 0.0 0.0 2.6969352767330816 0.0 14 0.0 0.0 0.0 2.7471042436939905 0.0 15 0.0 0.0 0.0 2.824300858348628 0.0 16 0.0 0.0 0.0 2.974454456647123 0.0 17 0.0 0.0 0.0 3.134971597416416 0.0 18 0.0 0.0 0.0 3.339003839810253 0.0 19 0.0 0.0 0.0 3.4558881114269244 0.0 20 0.0 0.0 0.0 3.5836658793907414 0.0 21 0.0 0.0 0.0 3.7576085183608408 0.0 22 0.0 0.0 0.0 3.9396771167682707 0.0 23 0.0 0.0 0.0 4.139823030735558 0.0 24 0.0 0.0 0.0 4.29439291133695 0.0 25 0.0 0.0 0.0 4.42417272727808 0.0 26 0.0 0.0 0.0 4.552362681590168 0.0 27 0.0 0.0 0.0 4.669305836970878 0.0 28 0.0 0.0 0.0 4.8115690108881966 0.0 29 0.0 0.0 0.0 4.952890044580898 0.0 30 0.0 0.0 0.0 5.143084602425658 0.0 31 0.0 0.0 0.0 5.317557195272105 0.0 32 0.0 0.0 0.0 5.483256107276796 0.0 33 0.0 0.0 0.0 5.642124502653008 0.0 34 0.0 0.0 0.0 5.803524899882881 0.0 35 0.0 0.0 0.0 5.997252483569958 0.0 36 0.0 0.0 0.0 6.184620620740864 0.0 37 0.0 0.0 0.0 6.376758342798898 0.0 38 0.0 0.0 0.0 6.567247319463852 0.0 39 0.0 0.0 0.0 6.766568860734599 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTAGCG 40 6.8175723E-9 45.000004 1 GTCGACG 20 7.0342387E-4 45.000004 9 ACGTTAG 90 0.0 45.0 1 ACTACGC 25 3.891596E-5 45.0 31 TAATCGC 25 3.891596E-5 45.0 25 GTATCGA 30 2.1661162E-6 44.999996 13 CGTTGAT 285 0.0 44.210526 25 CGAATGG 155 0.0 43.548386 2 TTTACGG 160 0.0 42.187504 2 TCGTTGA 300 0.0 42.0 24 GCGAGAC 480 0.0 41.718746 21 ATGACGG 170 0.0 41.02941 2 CACGACC 495 0.0 40.90909 27 TTAATCG 310 0.0 40.64516 20 CACAACG 295 0.0 40.42373 12 AAACACG 475 0.0 40.263157 40 ACACGAC 500 0.0 40.05 26 ATACGAG 45 1.9292202E-8 40.0 1 ACGGGAT 515 0.0 39.757282 5 GGTATGC 550 0.0 39.68182 8 >>END_MODULE