SRR1547583_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547583_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2302039
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15990	0.6946016118753853	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	5485	0.23826703196600926	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTACGA	30	2.1664546E-6	45.000004	16
TAGTACG	65	0.0	45.000004	1
AACCGGT	50	2.1827873E-11	45.0	3
CGCGCTA	20	7.034763E-4	45.0	40
CGCGATA	20	7.034763E-4	45.0	11
TAACGCG	20	7.034763E-4	45.0	1
ATCGTAC	25	3.892029E-5	45.0	41
TACGCTA	20	7.034763E-4	45.0	39
TACGAAC	25	3.892029E-5	45.0	34
TTGCGAC	20	7.034763E-4	45.0	19
ACGCTAG	50	2.1827873E-11	45.0	1
GTATCCG	25	3.892029E-5	45.0	1
TCGTACC	20	7.034763E-4	45.0	30
CCGACAA	35	1.2126475E-7	45.0	30
CCGCGAT	20	7.034763E-4	45.0	10
GCCCGTT	20	7.034763E-4	45.0	23
TGGTCGC	20	7.034763E-4	45.0	45
CGCTTAA	20	7.034763E-4	45.0	29
CGGACTA	20	7.034763E-4	45.0	34
TACGCGG	170	0.0	43.67647	2