SRR1547582_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547582_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2642905
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	75246	2.84709439045293	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTT	5921	0.22403378100991142	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCT	4483	0.16962395545810385	No Hit
CGTTCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTC	3269	0.12368965210629969	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3206	0.12130591148754874	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	32235	0.0	43.708702	1
ATAACGC	80	0.0	42.1875	11
TCGATAG	65	0.0	41.53846	1
TACGGGA	1085	0.0	40.852535	4
TATAGCG	155	0.0	40.64516	1
CGGTTTT	1145	0.0	39.497818	1
CATACGA	1100	0.0	39.272728	18
GCGTAAG	155	0.0	39.193546	1
CGACGGT	150	0.0	39.000004	28
ATAGCGG	395	0.0	38.734177	2
ACGGGAT	1145	0.0	38.515285	5
GTTTTTT	37475	0.0	38.467644	2
CTATGCG	100	0.0	38.25	1
CACGACC	1195	0.0	38.22176	27
GCGAGAC	1190	0.0	38.193275	21
CGTAAGG	395	0.0	38.16456	2
CGTTCGA	125	0.0	37.800003	14
GGGCGAT	4335	0.0	37.629757	7
ACACGAC	1210	0.0	37.56198	26
TAACGCG	60	1.5643309E-10	37.500004	1