SRR1547581_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547581_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2442140
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8157	0.3340103351978183	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTCGGT	30	2.1665091E-6	45.000004	22
TAATACG	20	7.0348475E-4	45.0	1
GTCGCGC	20	7.0348475E-4	45.0	39
TACCCGA	20	7.0348475E-4	45.0	28
CGTATCA	35	1.2126839E-7	45.0	23
GCGTTAA	35	1.2126839E-7	45.0	27
TATTACG	75	0.0	45.0	1
CGCAATA	35	1.2126839E-7	45.0	13
TTCGCGA	20	7.0348475E-4	45.0	32
GTCGGTA	20	7.0348475E-4	45.0	24
AATCGGC	25	3.8920993E-5	45.0	35
TTTAGCG	155	0.0	43.548386	1
CGTTTTT	4670	0.0	41.96467	1
CGACGGT	545	0.0	41.69725	28
CGCTAGC	65	0.0	41.53846	10
CCGGTAT	65	0.0	41.53846	37
CACGACG	555	0.0	40.945946	26
TGCGATG	165	0.0	40.90909	1
CGTAAGG	320	0.0	40.78125	2
GCGTAAG	205	0.0	40.609756	1