##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547580_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1401528 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.348182126935743 31.0 31.0 33.0 30.0 34.0 2 31.75985709882357 31.0 31.0 34.0 30.0 34.0 3 31.900734769480167 31.0 31.0 34.0 30.0 34.0 4 35.63215290739821 37.0 35.0 37.0 33.0 37.0 5 35.53242603786724 37.0 35.0 37.0 33.0 37.0 6 35.58621946903665 37.0 35.0 37.0 33.0 37.0 7 35.956647316357575 37.0 35.0 37.0 35.0 37.0 8 35.90274543212836 37.0 35.0 37.0 35.0 37.0 9 37.524598866380124 39.0 37.0 39.0 35.0 39.0 10 37.01269328903882 39.0 37.0 39.0 33.0 39.0 11 36.80354013619421 39.0 37.0 39.0 32.0 39.0 12 36.511215616099 39.0 35.0 39.0 32.0 39.0 13 36.378820116330175 39.0 35.0 39.0 32.0 39.0 14 37.51224092561832 40.0 36.0 41.0 32.0 41.0 15 37.700683111575366 40.0 36.0 41.0 33.0 41.0 16 37.74136157108527 40.0 36.0 41.0 33.0 41.0 17 37.671056875067784 40.0 36.0 41.0 33.0 41.0 18 37.58081251319988 39.0 36.0 41.0 32.0 41.0 19 37.58768786638583 39.0 36.0 41.0 32.0 41.0 20 37.48902626276464 39.0 35.0 41.0 32.0 41.0 21 37.36399772248574 39.0 35.0 41.0 32.0 41.0 22 37.2870631196808 39.0 35.0 41.0 32.0 41.0 23 37.19521479413897 39.0 35.0 41.0 32.0 41.0 24 37.12463611144408 39.0 35.0 41.0 32.0 41.0 25 37.05996669349453 39.0 35.0 41.0 32.0 41.0 26 37.05653401145036 39.0 35.0 41.0 32.0 41.0 27 37.03407423897346 39.0 35.0 41.0 32.0 41.0 28 36.974722588489136 39.0 35.0 41.0 31.0 41.0 29 36.94483378141571 39.0 35.0 41.0 31.0 41.0 30 36.84541086585498 39.0 35.0 41.0 31.0 41.0 31 36.74265016467741 39.0 35.0 41.0 31.0 41.0 32 36.62115277040487 39.0 35.0 41.0 30.0 41.0 33 36.545170699408075 39.0 35.0 41.0 30.0 41.0 34 36.48785682483689 39.0 35.0 41.0 30.0 41.0 35 36.373961847355176 39.0 35.0 41.0 30.0 41.0 36 36.334608370293 39.0 35.0 41.0 30.0 41.0 37 36.293385504963155 39.0 35.0 41.0 30.0 41.0 38 36.1839363894264 38.0 35.0 41.0 30.0 41.0 39 36.144010679772364 38.0 35.0 41.0 30.0 41.0 40 36.07997128847943 38.0 35.0 41.0 30.0 41.0 41 36.03058090883664 38.0 35.0 41.0 29.0 41.0 42 36.020967115890656 38.0 35.0 40.0 29.0 41.0 43 35.97242509603804 38.0 35.0 40.0 29.0 41.0 44 35.870624775245304 38.0 35.0 40.0 29.0 41.0 45 35.80170713678214 38.0 35.0 40.0 29.0 41.0 46 35.771546483552235 38.0 35.0 40.0 29.0 41.0 47 35.708055779121075 38.0 35.0 40.0 28.0 41.0 48 35.62235859718821 38.0 35.0 40.0 28.0 41.0 49 35.56407221261366 38.0 34.0 40.0 28.0 41.0 50 35.479003630323476 38.0 34.0 40.0 28.0 41.0 51 35.057794778270576 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 3.0 12 4.0 13 5.0 14 11.0 15 20.0 16 66.0 17 167.0 18 318.0 19 677.0 20 1293.0 21 2107.0 22 3383.0 23 5293.0 24 7742.0 25 11280.0 26 15136.0 27 18078.0 28 21462.0 29 25327.0 30 31371.0 31 38659.0 32 47805.0 33 61823.0 34 98636.0 35 136525.0 36 112515.0 37 136379.0 38 206427.0 39 418821.0 40 193.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.924085712165578 26.087170573830846 29.381075511869902 12.60766820213367 2 29.872039659571552 26.78712091374557 30.442203081208508 12.898636345474369 3 29.754810464007853 24.963325741619148 31.79636796410775 13.485495830265254 4 27.45974393661775 27.327388393239378 31.573967840813737 13.638899829329132 5 24.412569709631203 31.786735619980476 29.745962977550217 14.054731692838102 6 21.855931526162877 41.622714637167434 26.18206700115874 10.339286835510956 7 85.61448647476183 5.0353614055516545 7.165465120925162 2.184686998761352 8 85.83453202504695 4.600621607274346 6.727086437088663 2.8377599305900416 9 80.00767733502292 7.751611098743657 8.671606988943497 3.569104577289929 10 38.55677517680703 32.14677123824854 17.99007939905589 11.306374185888544 11 30.808446210136363 26.375998196254375 24.861294244567357 17.954261349041904 12 28.327083012255194 23.34601948730243 29.58449634969833 18.742401150744044 13 24.222919556369902 29.56701542887477 29.00077629558596 17.209288719169365 14 17.97680816936943 33.27461170950563 29.59384329103664 19.154736830088304 15 17.767322522275688 31.361414113738718 33.924759262747514 16.946504101238077 16 19.902492137153164 30.78918152188183 33.43779075409125 15.870535586873755 17 20.74464441666524 31.068519501572567 26.711489174672217 21.475346907089975 18 20.74257524644531 31.99122671826749 30.126476245925875 17.139721789361325 19 23.618365098663745 32.905015097807535 25.829808608889728 17.646811194638996 20 23.723179272907853 32.19008111147262 27.49113824340291 16.59560137221661 21 22.628802278655865 31.820841253260728 28.927713181613214 16.622643286470197 22 21.904307298890924 27.449612137609808 28.702459030429644 21.94362153306962 23 19.8434851105365 30.3010000513725 29.029459275876047 20.826055562214954 24 18.64529285180175 29.671686901724403 32.18187578129014 19.501144465183714 25 19.316417510031908 32.06828547128563 28.7693146337426 19.845982384939866 26 18.349758263837753 35.83124989297396 27.091645689561677 18.727346153626616 27 18.963088857304314 34.4048067537716 28.176104936897445 18.455999452026646 28 16.714400283119566 32.75218190432157 31.797652276658045 18.735765535900818 29 18.41447334623354 29.8428572244008 31.53344064478198 20.209228784583683 30 19.665322419530685 31.231199091277517 28.919507851430726 20.18397063776107 31 22.12891929379934 30.15844135828895 27.241624855158086 20.47101449275362 32 20.937648052696773 31.47050932981717 28.52843467986369 19.06340793762237 33 21.243100387576987 30.850115017323947 27.324962469533254 20.58182212556581 34 18.608547242723656 30.621079279186713 29.187643771654937 21.58272970643469 35 19.44634712970415 29.53248169141109 30.141673944437784 20.879497234446976 36 21.29647070911177 30.86174518097391 28.28534285437037 19.556441255543948 37 18.875898305278238 33.17022563944495 28.187663749850163 19.76621230542665 38 18.968083406111045 33.49829614534993 27.265384637338673 20.26823581120035 39 20.543364099753983 31.1053364613479 28.251308571787366 20.099990867110755 40 20.663946778087915 30.40374505539668 28.272071624683914 20.660236541831488 41 17.574247535546917 30.43078696965027 28.346633103298686 23.64833239150413 42 20.431628907877688 29.370943712861962 27.637335822045657 22.560091557214697 43 19.883869605173782 28.597644856185532 28.461436375156257 23.057049163484425 44 18.848142884052262 31.028277708329767 28.975018693882674 21.148560713735296 45 19.164083771426615 32.36303520157999 27.603943695737794 20.8689373312556 46 20.91802661095604 31.826620659737088 26.986403411134134 20.268949318172737 47 19.62279740397623 30.04014190226667 27.939006569972204 22.398054123784895 48 18.379440153889185 30.26618091111986 29.806539719506137 21.547839215484814 49 19.52904258780417 28.427544793967723 30.86153112888219 21.181881489345912 50 18.774723016593317 29.913137661181228 29.314362609951424 21.997776712274035 51 18.430884006598514 29.331772180077742 28.76867247746745 23.468671335856296 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1710.0 1 2410.0 2 3110.0 3 8415.0 4 13720.0 5 9390.0 6 5060.0 7 5250.0 8 5440.0 9 6544.5 10 7649.0 11 8776.0 12 9903.0 13 9868.0 14 9833.0 15 9108.5 16 8384.0 17 7744.0 18 7104.0 19 6894.0 20 6684.0 21 6957.0 22 7230.0 23 8117.0 24 9004.0 25 11757.5 26 16481.0 27 18451.0 28 24538.5 29 30626.0 30 35349.0 31 40072.0 32 44655.0 33 49238.0 34 51207.0 35 53176.0 36 58176.0 37 63176.0 38 67610.5 39 72045.0 40 82690.5 41 93336.0 42 98906.0 43 104476.0 44 112293.0 45 120110.0 46 123718.0 47 127326.0 48 130483.0 49 133640.0 50 121215.0 51 108790.0 52 91055.5 53 73321.0 54 64694.5 55 56068.0 56 51236.5 57 46405.0 58 41932.0 59 37459.0 60 33472.0 61 29485.0 62 23020.5 63 16556.0 64 12751.5 65 8947.0 66 6662.5 67 4378.0 68 3364.0 69 2350.0 70 1802.0 71 1254.0 72 971.5 73 689.0 74 497.0 75 283.0 76 261.0 77 191.0 78 121.0 79 103.0 80 85.0 81 51.5 82 18.0 83 17.0 84 16.0 85 9.0 86 2.0 87 2.0 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1401528.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.08335418300235 #Duplication Level Percentage of deduplicated Percentage of total 1 73.29158008643677 15.452323415942285 2 11.158715900772842 4.705263191269879 3 4.439155340146529 2.807768529290266 4 2.3679888243911713 1.9970058834412168 5 1.3725245058823474 1.4468710141183911 6 0.9284804874783688 1.1745289781707877 7 0.5916860393257833 0.8732308432570342 8 0.45040692085826073 0.7596870911144176 9 0.3652338464140381 0.6930319089210704 >10 3.0422377352576344 14.27822670966264 >50 0.907972252920728 13.866724449316642 >100 1.073400505656278 38.891612992134455 >500 0.006165031621509925 0.8719461158890912 >1k 0.004110021081006617 1.5011915364984114 >5k 3.4250175675055143E-4 0.6805873409734728 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9425 0.6724803214777014 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3494 0.2492993361531129 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 2659 0.18972150395853668 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2187 0.15604397486172233 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1734 0.12372210901244926 No Hit CTGTCTCTTATACACATCTGACGCTCCTTCAGTCGTATGCCGTCTTCTGCT 1694 0.12086808112288874 No Hit GCTGTCTCTTATACACATCTGACGCTCCTTCAGTCGTATGCCGTCTTCTGC 1602 0.1143038169768995 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 1474 0.10517092773030577 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1308571787363506 0.0 2 0.0 0.0 0.0 0.46435033763149935 0.0 3 0.0 0.0 0.0 0.6801148460822759 0.0 4 0.0 0.0 0.0 1.0035475566667238 0.0 5 0.0 0.0 0.0 1.728185237826144 0.0 6 0.0 0.0 0.0 2.3577837902631984 0.0 7 0.0 0.0 0.0 2.7960911234024577 0.0 8 0.0 0.0 0.0 3.7409884069387127 0.0 9 0.0 0.0 0.0 4.014618330850329 0.0 10 0.0 0.0 0.0 4.588277936651997 0.0 11 0.0 0.0 0.0 5.558290665616385 0.0 12 0.0 0.0 0.0 6.198092367758618 0.0 13 0.0 0.0 0.0 6.460234829414753 0.0 14 0.0 0.0 0.0 6.562123625072064 0.0 15 0.0 0.0 0.0 6.722805395254323 0.0 16 0.0 0.0 0.0 7.124295768618251 0.0 17 0.0 0.0 0.0 7.6101940168159325 0.0 18 0.0 0.0 0.0 8.124989297395414 0.0 19 0.0 0.0 0.0 8.47096882830739 0.0 20 0.0 0.0 0.0 8.795186396561467 0.0 21 0.0 0.0 0.0 9.23320832691177 0.0 22 0.0 0.0 0.0 9.711543401202116 0.0 23 0.0 0.0 0.0 10.240180717045966 0.0 24 0.0 0.0 0.0 10.597148255332751 0.0 25 0.0 0.0 0.0 10.933281390025744 0.0 26 0.0 0.0 0.0 11.232526214246166 0.0 27 0.0 0.0 0.0 11.53733639285123 0.0 28 0.0 0.0 0.0 11.886526705138962 0.0 29 0.0 0.0 0.0 12.241139670416858 0.0 30 0.0 0.0 0.0 12.628645307121941 0.0 31 0.0 0.0 0.0 13.00687535318595 0.0 32 0.0 0.0 0.0 13.361488318463849 0.0 33 0.0 0.0 0.0 13.716957492108612 0.0 34 0.0 0.0 0.0 14.0693585857721 0.0 35 0.0 0.0 0.0 14.447945385322305 0.0 36 0.0 0.0 0.0 14.821894389551975 0.0 37 0.0 0.0 0.0 15.204904932330999 0.0 38 0.0 0.0 0.0 15.599616989457221 0.0 39 0.0 0.0 0.0 16.01708991900269 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACCGG 35 1.2121745E-7 45.000004 3 GATATCG 35 1.2121745E-7 45.000004 10 GCCAACG 35 1.2121745E-7 45.000004 1 AATCGGC 55 1.8189894E-12 45.000004 15 CGGACTC 35 1.2121745E-7 45.000004 14 TCTGCGA 20 7.0338167E-4 45.0 18 AAGTACG 20 7.0338167E-4 45.0 1 AACCGAT 20 7.0338167E-4 45.0 37 AGCCGGT 20 7.0338167E-4 45.0 18 ATCTCGT 20 7.0338167E-4 45.0 19 TCGTTCG 25 3.8912447E-5 45.0 38 ATCTCGC 25 3.8912447E-5 45.0 39 GGTACGT 20 7.0338167E-4 45.0 8 ACCGGCC 20 7.0338167E-4 45.0 41 TCCGCTT 25 3.8912447E-5 45.0 10 CTCGTTT 25 3.8912447E-5 45.0 11 CGTATTA 40 6.8175723E-9 45.0 30 CTCGTAG 45 3.8562575E-10 45.0 1 CTCCGGT 25 3.8912447E-5 45.0 30 CGAAACG 20 7.0338167E-4 45.0 30 >>END_MODULE