##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547576_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2152285 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.480239373503043 31.0 31.0 33.0 30.0 34.0 2 31.910563424453546 31.0 31.0 34.0 30.0 34.0 3 32.05892435249049 33.0 31.0 34.0 30.0 34.0 4 35.77676887586914 37.0 35.0 37.0 35.0 37.0 5 35.69425656918113 37.0 35.0 37.0 33.0 37.0 6 35.7362886420711 37.0 35.0 37.0 33.0 37.0 7 36.06152902612804 37.0 35.0 37.0 35.0 37.0 8 36.01869733794548 37.0 35.0 37.0 35.0 37.0 9 37.680641271950506 39.0 38.0 39.0 35.0 39.0 10 37.236997423668335 39.0 37.0 39.0 34.0 39.0 11 37.00288298250464 39.0 37.0 39.0 33.0 39.0 12 36.73534964003373 39.0 35.0 39.0 33.0 39.0 13 36.630750574389545 39.0 35.0 39.0 33.0 39.0 14 37.649895808408274 40.0 36.0 41.0 32.0 41.0 15 37.85870551530118 40.0 36.0 41.0 33.0 41.0 16 37.949088062222245 40.0 36.0 41.0 33.0 41.0 17 37.89684776876668 40.0 36.0 41.0 33.0 41.0 18 37.81711158141231 40.0 36.0 41.0 33.0 41.0 19 37.807523631861024 40.0 36.0 41.0 33.0 41.0 20 37.705418195081045 40.0 36.0 41.0 33.0 41.0 21 37.6058858376098 39.0 35.0 41.0 33.0 41.0 22 37.561959034235706 39.0 35.0 41.0 33.0 41.0 23 37.49150879181893 39.0 35.0 41.0 33.0 41.0 24 37.45692508194779 39.0 35.0 41.0 32.0 41.0 25 37.377901160859274 39.0 35.0 41.0 32.0 41.0 26 37.41090422504455 39.0 35.0 41.0 33.0 41.0 27 37.4000775919546 39.0 35.0 41.0 32.0 41.0 28 37.35659357380644 39.0 35.0 41.0 32.0 41.0 29 37.3219378474505 39.0 35.0 41.0 32.0 41.0 30 37.22235298763872 39.0 35.0 41.0 32.0 41.0 31 37.11507955498459 39.0 35.0 41.0 32.0 41.0 32 37.029140657487275 39.0 35.0 41.0 31.0 41.0 33 36.94243141591379 39.0 35.0 41.0 31.0 41.0 34 36.871938892851084 39.0 35.0 41.0 31.0 41.0 35 36.74555600210939 39.0 35.0 41.0 31.0 41.0 36 36.64420325375124 39.0 35.0 41.0 30.0 41.0 37 36.600924598740406 39.0 35.0 41.0 30.0 41.0 38 36.432221104547025 39.0 35.0 41.0 30.0 41.0 39 36.24462606021043 39.0 35.0 41.0 30.0 41.0 40 36.07882831502334 39.0 35.0 41.0 29.0 41.0 41 35.96283205988055 39.0 35.0 41.0 28.0 41.0 42 35.831625923146795 39.0 35.0 41.0 27.0 41.0 43 35.75445723963137 39.0 35.0 41.0 27.0 41.0 44 35.577761309492004 38.0 35.0 41.0 26.0 41.0 45 35.38229881265725 38.0 35.0 40.0 25.0 41.0 46 35.22696761813607 38.0 34.0 40.0 24.0 41.0 47 35.12940340150119 38.0 34.0 40.0 24.0 41.0 48 35.05631782036301 38.0 34.0 40.0 24.0 41.0 49 34.937562172295955 38.0 34.0 40.0 24.0 41.0 50 34.79456298770841 38.0 34.0 40.0 23.0 41.0 51 34.319005614962705 37.0 34.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 9.0 11 6.0 12 12.0 13 14.0 14 23.0 15 44.0 16 82.0 17 250.0 18 480.0 19 927.0 20 1680.0 21 2795.0 22 4568.0 23 7120.0 24 11013.0 25 16571.0 26 22816.0 27 27417.0 28 31939.0 29 38074.0 30 46762.0 31 59426.0 32 74956.0 33 96799.0 34 150182.0 35 190280.0 36 158855.0 37 206146.0 38 329567.0 39 673272.0 40 198.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.17938144808889 25.14239517536014 30.34198537833047 12.336237998220497 2 30.447965766615482 25.61742520158808 30.821940402874155 13.112668628922286 3 29.803441458728745 25.029259600842824 31.51511068469092 13.652188255737506 4 27.205644233918836 27.180182921871403 31.284379159823168 14.329793684386594 5 24.20627379738278 32.55010372696924 29.20844590748902 14.035176568158958 6 23.29394109051543 39.13937977544795 26.956606583235953 10.61007255080066 7 88.12127576041277 3.6275864952829204 6.32490585586946 1.9262318884348495 8 88.07625384184715 3.33208659633831 6.1447252571104665 2.44693430470407 9 82.26759002641379 6.413555825552843 8.021196077657002 3.2976580703763676 10 39.435019061137346 34.585661285563944 15.204073809927587 10.775245843371115 11 28.90342124765075 25.884861902582607 27.732154431220774 17.47956241854587 12 28.14808447765979 22.58134958892526 30.501629663357782 18.76893627005717 13 26.248010834996293 24.480401062126994 30.511990744720148 18.75959735815656 14 18.843368791772466 29.16881360972176 32.12878405973187 19.859033538773907 15 17.461163368234224 30.96434719379636 34.28951091514367 17.284978522825742 16 23.80581567961492 29.000852582255604 31.06661060222043 16.126721135909044 17 24.07255544688552 29.422125787244717 26.922317444018802 19.58300132185096 18 22.82773889145722 29.383051036456603 30.811439934767005 16.977770137319176 19 24.256824723491548 30.798848665488077 27.253686198621462 17.690640412398917 20 24.417351791235824 31.17235867926413 28.140696980186174 16.26959254931387 21 24.719217018192293 27.922138564362992 31.775206350460095 15.583438066984623 22 23.0864871520268 23.412141050093275 32.991727396697 20.50964440118293 23 20.353113086789158 27.254243745600604 32.244242746662266 20.148400420947972 24 19.669839263852136 28.162720085862237 33.67820711476408 18.489233535521553 25 20.80430797965883 30.095224377812418 29.240086698555256 19.8603809439735 26 19.43506552338561 32.658918312398214 27.56702760089858 20.33898856331759 27 18.862743549297605 31.824224022376217 30.684040450033333 18.628991978292838 28 17.675865417451686 30.272756628420495 32.50289808273533 19.548479871392495 29 19.305203539494073 28.477501817835467 32.26923943622708 19.948055206443385 30 21.02314516897158 28.710509992868044 31.12835893016027 19.1379859080001 31 21.725561438192432 28.24500472753376 30.010802472720854 20.018631361552956 32 23.412048125596748 28.25764245906095 29.701038663559892 18.62927075178241 33 22.758370754802453 27.8724704209712 29.545157820641784 19.824001003584563 34 20.042791730649054 27.44362386951542 31.658539645074885 20.855044754760637 35 20.758310353879715 28.572098955296347 30.53568649133363 20.13390419949031 36 22.150226387304656 28.431736503297657 30.1951646738234 19.222872435574285 37 20.864662440150816 29.963875601976504 29.579818657845035 19.591643300027645 38 21.566242388902957 29.510218209948963 28.52628717851028 20.397252222637803 39 20.26520651307796 28.330820500073177 29.334776760512664 22.069196226336196 40 22.33365934344197 27.53938256318285 29.786436275864954 20.340521817510226 41 19.717881228554766 26.413509363304584 30.09545668905373 23.773152719086923 42 19.961157560453195 26.998794304657608 30.846286620963305 22.193761513925896 43 20.441809518720802 26.837152142955045 30.41116766599219 22.309870672331964 44 20.2984270205851 28.423280374114025 29.91225604415772 21.366036561143158 45 19.77056941808357 28.949465335678127 29.45539275700012 21.824572489238182 46 21.60122846184404 28.473924224719312 28.84246277793136 21.082384535505287 47 19.63480672866279 27.56029057490063 31.00323609559143 21.80166660084515 48 19.59043528157284 28.11788401628966 31.57179462757023 20.719886074567263 49 21.317390587213126 26.807462766315798 30.838434501007068 21.036712145464005 50 19.502482245613383 27.907456493912285 30.47705113402732 22.11301012644701 51 18.838583180201507 28.55718457360433 29.078537461349217 23.525694784844944 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1589.0 1 2856.0 2 4123.0 3 10616.5 4 17110.0 5 11932.5 6 6755.0 7 6852.5 8 6950.0 9 7632.0 10 8314.0 11 8629.5 12 8945.0 13 9173.0 14 9401.0 15 8571.0 16 7741.0 17 7742.5 18 7744.0 19 7956.5 20 8169.0 21 9375.5 22 10582.0 23 12427.5 24 14273.0 25 17769.5 26 26132.0 27 30998.0 28 36789.0 29 42580.0 30 48953.0 31 55326.0 32 64519.0 33 73712.0 34 83100.0 35 92488.0 36 97674.5 37 102861.0 38 109687.0 39 116513.0 40 129200.0 41 141887.0 42 149025.5 43 156164.0 44 163221.5 45 170279.0 46 172732.5 47 175186.0 48 178226.5 49 181267.0 50 172318.5 51 163370.0 52 149170.5 53 134971.0 54 121626.5 55 108282.0 56 98164.5 57 88047.0 58 79426.5 59 70806.0 60 59585.5 61 48365.0 62 38753.0 63 29141.0 64 22879.5 65 16618.0 66 13676.5 67 10735.0 68 7546.0 69 4357.0 70 3207.0 71 2057.0 72 1801.5 73 1546.0 74 1171.5 75 621.5 76 446.0 77 369.5 78 293.0 79 191.5 80 90.0 81 103.5 82 117.0 83 66.5 84 16.0 85 10.0 86 4.0 87 3.0 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2152285.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.187778172292067 #Duplication Level Percentage of deduplicated Percentage of total 1 77.42638628104014 17.179194834859164 2 9.586883332875768 4.254232815069832 3 3.6519962074484345 2.430890452107534 4 1.7845340159365792 1.5837937954604135 5 1.0454370494898806 1.1597962673588498 6 0.6766698306230855 0.900828005864848 7 0.4870006882814572 0.7563824268939771 8 0.3675055827466553 0.6523305877649371 9 0.2842274647037784 0.5675738343588368 >10 2.6746555837118446 13.401645664893941 >50 0.9210809487949192 14.848508538409499 >100 1.0885452523976369 40.78516555138921 >500 0.003596748047778771 0.5552470071075599 >1k 0.001269440487451331 0.42995496602114813 >5k 0.0 0.0 >10k+ 2.115734145752218E-4 0.494455252440305 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10533 0.489386860940814 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2799 0.13004783288458546 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08391082036068644 0.0 2 0.0 0.0 0.0 0.29805532259900525 0.0 3 0.0 0.0 0.0 0.44552649858173987 0.0 4 0.0 0.0 0.0 0.6541419932769127 0.0 5 0.0 0.0 0.0 1.1624389892602514 0.0 6 0.0 0.0 0.0 1.6080584123385147 0.0 7 0.0 0.0 0.0 1.9146163263694167 0.0 8 0.0 0.0 0.0 2.5900844915984638 0.0 9 0.0 0.0 0.0 2.809897388124714 0.0 10 0.0 0.0 0.0 3.256631905161259 0.0 11 0.0 0.0 0.0 3.9669467565866046 0.0 12 0.0 0.0 0.0 4.5096258162836245 0.0 13 0.0 0.0 0.0 4.718938244702723 0.0 14 0.0 0.0 0.0 4.81492924961146 0.0 15 0.0 0.0 0.0 4.962679199083764 0.0 16 0.0 0.0 0.0 5.292468237245532 0.0 17 0.0 0.0 0.0 5.695435316419526 0.0 18 0.0 0.0 0.0 6.1207507370074135 0.0 19 0.0 0.0 0.0 6.421733181246907 0.0 20 0.0 0.0 0.0 6.7449245801555096 0.0 21 0.0 0.0 0.0 7.156254864016615 0.0 22 0.0 0.0 0.0 7.618136073986484 0.0 23 0.0 0.0 0.0 8.082526245362487 0.0 24 0.0 0.0 0.0 8.407576134201557 0.0 25 0.0 0.0 0.0 8.711857398067636 0.0 26 0.0 0.0 0.0 8.996392206422476 0.0 27 0.0 0.0 0.0 9.303321818439473 0.0 28 0.0 0.0 0.0 9.61782477692313 0.0 29 0.0 0.0 0.0 9.971123712705333 0.0 30 0.0 0.0 0.0 10.398065311982382 0.0 31 0.0 0.0 0.0 10.777150795549845 0.0 32 0.0 0.0 0.0 11.110703275820814 0.0 33 0.0 0.0 0.0 11.451318017827564 0.0 34 0.0 0.0 0.0 11.802433227941467 0.0 35 0.0 0.0 0.0 12.177662344903208 0.0 36 0.0 0.0 0.0 12.525060575156171 0.0 37 4.6462248261731136E-5 0.0 0.0 12.904564218957992 0.0 38 4.6462248261731136E-5 0.0 0.0 13.345258643720511 0.0 39 4.6462248261731136E-5 0.0 0.0 14.01408270744813 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGCAT 20 7.0346624E-4 45.0 15 CCGCTAT 55 1.8189894E-12 45.0 38 CCTCGCG 20 7.0346624E-4 45.0 12 GTTACGC 20 7.0346624E-4 45.0 45 TCGTACT 20 7.0346624E-4 45.0 33 CGCGTCA 20 7.0346624E-4 45.0 39 TCGACGT 55 1.8189894E-12 45.0 26 TACCGCG 40 6.8193913E-9 45.0 1 ACGGTCG 20 7.0346624E-4 45.0 36 CTAGCGT 20 7.0346624E-4 45.0 14 CGTACGA 30 2.166389E-6 44.999996 36 CGTGTCG 30 2.166389E-6 44.999996 37 CTTACCG 30 2.166389E-6 44.999996 32 TACGCGG 110 0.0 42.954544 2 CGTTTTT 5100 0.0 42.2647 1 CGAATAT 220 0.0 40.909092 14 GCCCGTT 55 6.184564E-11 40.909092 3 TACGTAG 110 0.0 40.909092 1 TCGATAG 105 0.0 40.714287 1 TTTACGG 255 0.0 40.588234 2 >>END_MODULE