##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547575_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1660703 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.381982208739313 31.0 31.0 33.0 30.0 34.0 2 31.803983614168217 31.0 31.0 34.0 30.0 34.0 3 31.96993622580317 33.0 31.0 34.0 30.0 34.0 4 35.68586255338853 37.0 35.0 37.0 33.0 37.0 5 35.57380097464748 37.0 35.0 37.0 33.0 37.0 6 35.61489260873257 37.0 35.0 37.0 33.0 37.0 7 35.974916646745385 37.0 35.0 37.0 35.0 37.0 8 35.93419955283997 37.0 35.0 37.0 35.0 37.0 9 37.600596253514325 39.0 37.0 39.0 35.0 39.0 10 37.15875746596471 39.0 37.0 39.0 33.0 39.0 11 36.86326031807012 39.0 37.0 39.0 32.0 39.0 12 36.46089216434245 39.0 35.0 39.0 32.0 39.0 13 36.2821588206922 39.0 35.0 39.0 32.0 39.0 14 37.23789804679103 40.0 35.0 41.0 32.0 41.0 15 37.47191279837514 40.0 35.0 41.0 32.0 41.0 16 37.57239193281399 40.0 35.0 41.0 32.0 41.0 17 37.53829432475283 40.0 35.0 41.0 32.0 41.0 18 37.46499584814383 39.0 36.0 41.0 32.0 41.0 19 37.47177008772791 39.0 36.0 41.0 32.0 41.0 20 37.37010169789541 39.0 35.0 41.0 32.0 41.0 21 37.24438264999822 39.0 35.0 41.0 32.0 41.0 22 37.18654870858907 39.0 35.0 41.0 32.0 41.0 23 37.1389056321329 39.0 35.0 41.0 32.0 41.0 24 37.06178829086237 39.0 35.0 41.0 32.0 41.0 25 37.0041711251199 39.0 35.0 41.0 31.0 41.0 26 37.028159159103105 39.0 35.0 41.0 32.0 41.0 27 37.00790448382402 39.0 35.0 41.0 31.0 41.0 28 36.94257431942978 39.0 35.0 41.0 31.0 41.0 29 36.943800306255845 39.0 35.0 41.0 31.0 41.0 30 36.861432176614365 39.0 35.0 41.0 31.0 41.0 31 36.72587873930498 39.0 35.0 41.0 31.0 41.0 32 36.62054081915912 39.0 35.0 41.0 30.0 41.0 33 36.56548822998453 39.0 35.0 41.0 30.0 41.0 34 36.505363692364014 39.0 35.0 41.0 30.0 41.0 35 36.414500365206784 39.0 35.0 41.0 30.0 41.0 36 36.355234500088216 39.0 35.0 41.0 30.0 41.0 37 36.340513023701405 39.0 35.0 41.0 30.0 41.0 38 36.21716285211745 39.0 35.0 41.0 30.0 41.0 39 36.182146958245994 39.0 35.0 41.0 30.0 41.0 40 36.10578953611814 38.0 35.0 41.0 29.0 41.0 41 36.02901662729579 38.0 35.0 41.0 29.0 41.0 42 36.04410421369745 38.0 35.0 41.0 29.0 41.0 43 36.02442820901751 38.0 35.0 41.0 29.0 41.0 44 35.91825028316322 38.0 35.0 40.0 29.0 41.0 45 35.857064749085175 38.0 35.0 40.0 29.0 41.0 46 35.82422745066397 38.0 35.0 40.0 29.0 41.0 47 35.764599690612954 38.0 35.0 40.0 29.0 41.0 48 35.6985270695603 38.0 34.0 40.0 28.0 41.0 49 35.62887102630633 38.0 34.0 40.0 28.0 41.0 50 35.53674678735451 38.0 34.0 40.0 28.0 41.0 51 35.09262643591298 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 7.0 12 6.0 13 3.0 14 11.0 15 33.0 16 99.0 17 269.0 18 524.0 19 1033.0 20 1795.0 21 2850.0 22 4452.0 23 6426.0 24 9302.0 25 13428.0 26 17912.0 27 22131.0 28 25672.0 29 29960.0 30 36533.0 31 45732.0 32 56768.0 33 74078.0 34 121502.0 35 163672.0 36 114712.0 37 154891.0 38 248712.0 39 508043.0 40 144.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.18233302402657 24.353963351664927 29.658162838267888 12.805540786040611 2 29.52123287547502 25.987428215641206 31.040408790735007 13.45093011814876 3 29.3016270820249 25.11285883147077 32.073164196126584 13.51234989037775 4 27.27194447170867 28.402790866277716 30.275311118243298 14.049953543770318 5 23.731997834651953 31.80761400443065 29.301386220173026 15.159001940744371 6 22.71748771454017 41.159376480924045 25.72537052079752 10.397765283738272 7 89.41942057068603 3.4628106289926617 5.39440225013142 1.7233665501898896 8 89.86772469249469 2.7673822471567764 5.335150234569336 2.029742825779203 9 84.48115045254931 6.140411620861768 6.6115976185988705 2.76684030799005 10 42.10385601760218 38.09844385179048 11.390236544403184 8.407463586204155 11 29.678756526603493 24.619694189749765 28.723317775664885 16.97823150798186 12 30.499071778638324 23.054573876243975 28.416158699056965 18.030195646060733 13 26.580731172280654 27.57862182461283 27.418328262187757 18.422318740918755 14 17.585263590178375 31.087075774536448 29.865725539124092 21.461935096161085 15 16.82137022694606 31.848259441935134 34.980246317372824 16.350124013745987 16 22.5346133535015 28.33763773534461 33.10062064077683 16.027128270377062 17 23.138393800697656 28.035898050403958 27.251109921521188 21.5745982273772 18 23.084862254117684 28.579041526389727 30.770222008390423 17.565874211102166 19 24.640769601789124 30.38917855871881 27.0082609593648 17.96179088012727 20 26.001337987587185 30.94683396128025 27.719104499720903 15.33272355141166 21 26.110809699265914 26.625471261267066 31.05534222555147 16.208376813915553 22 23.890966656891692 22.821058310847874 31.76227176081455 21.525703271445888 23 20.159414416665715 27.112192848450324 32.00283253537809 20.72556019950587 24 20.38431917085716 28.21919391968341 33.400192569050574 17.99629434040885 25 20.789147728401765 30.221719356200357 29.765587224205653 19.22354569119222 26 19.55021457780229 33.86336991021272 26.51268769912501 20.073727812859975 27 18.15213195857417 32.49726170182146 31.488652697080692 17.86195364252368 28 16.57876212664155 30.487269547896283 33.58300671462627 19.350961610835892 29 18.447127511662227 28.743971679463453 32.344133779489766 20.464767029384543 30 20.98201785629339 28.640702160470592 31.644309668857108 18.73297031437891 31 23.65859518529201 28.003863424104132 28.87488009595936 19.462661294644498 32 24.08443893941301 28.987001288008752 28.20721104255246 18.721348730025777 33 23.583747364820802 28.688874530846277 27.895415375295883 19.831962729037038 34 19.951610853957632 27.848387098716625 30.461015606041535 21.738986441284204 35 20.145203567404888 29.196791960994833 29.62088946668971 21.03711500491057 36 22.774391327046438 28.46643861063658 28.661898003435894 20.09727205888109 37 20.548105230134468 30.37358275380968 29.290607652301464 19.787704363754386 38 19.816246493201977 31.58662325533223 27.75192192703933 20.845208324426462 39 19.77843118245707 28.920884709668133 30.208953678050804 21.091730429823997 40 22.375223023020972 27.628841520729473 29.448914104448537 20.547021351801014 41 19.365654183800473 26.710977218683894 30.455716645300214 23.46765195221542 42 20.14670895397913 27.68923763008798 28.61420735676397 23.549846059168917 43 20.49680165568437 27.29259837550724 29.049504938571197 23.161095030237195 44 19.98015298340522 28.01120971058642 30.012289975992097 21.996347330016263 45 19.955223781735807 30.577713173276617 27.785582370839336 21.681480674148236 46 22.08793504919302 29.353412380178757 27.38189790709115 21.176754663537068 47 19.705931765041672 29.141213088673894 29.18221981895619 21.970635327328246 48 20.053194339987343 28.435728724522086 30.666290119304897 20.844786816185675 49 21.195662318909523 27.210283837627802 30.386890371125965 21.207163472336717 50 18.667455890667988 28.434644846188633 30.98320410091389 21.91469516222949 51 18.6567375382594 28.974837764488893 29.17776387469644 23.190660822555266 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 995.0 1 1876.5 2 2758.0 3 6633.0 4 10508.0 5 7566.5 6 4625.0 7 4580.0 8 4535.0 9 4777.5 10 5020.0 11 5078.0 12 5136.0 13 5371.0 14 5606.0 15 5310.5 16 5015.0 17 4962.5 18 4910.0 19 4958.0 20 5006.0 21 6389.0 22 7772.0 23 9135.5 24 10499.0 25 12540.0 26 18429.5 27 22278.0 28 27737.0 29 33196.0 30 37670.5 31 42145.0 32 48970.5 33 55796.0 34 64611.0 35 73426.0 36 75423.5 37 77421.0 38 85837.5 39 94254.0 40 103436.5 41 112619.0 42 121725.0 43 130831.0 44 138803.5 45 146776.0 46 141922.0 47 137068.0 48 137477.5 49 137887.0 50 129247.0 51 120607.0 52 109290.5 53 97974.0 54 88904.5 55 79835.0 56 71322.5 57 62810.0 58 59871.0 59 56932.0 60 48018.5 61 39105.0 62 31317.5 63 23530.0 64 18660.0 65 13790.0 66 10762.5 67 7735.0 68 5607.5 69 3480.0 70 2806.5 71 2133.0 72 1619.0 73 1105.0 74 850.0 75 419.5 76 244.0 77 164.0 78 84.0 79 65.5 80 47.0 81 32.0 82 17.0 83 12.0 84 7.0 85 4.0 86 1.0 87 1.5 88 2.0 89 3.5 90 5.0 91 3.0 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1660703.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.05173858159826 #Duplication Level Percentage of deduplicated Percentage of total 1 76.17021810261858 12.988346467891757 2 9.796136735425598 3.340823254441374 3 3.5557866835294787 1.8189703493841878 4 1.7608932291228663 1.2010516405243812 5 0.9976865272372527 0.8506144924416124 6 0.6493478837736737 0.6643506217573641 7 0.45066167542323265 0.5379195554643436 8 0.3649602508372797 0.4978565431961457 9 0.2860400692205936 0.43897324357906503 >10 2.978645930778098 11.95514141238207 >50 1.316105361319834 16.367111074359478 >100 1.6645911716292643 47.678531581707716 >500 0.00606993777728387 0.6912782195684455 >1k 0.002499386143587476 0.5955075097409693 >5k 3.5705516336963943E-4 0.37352403356107217 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6135 0.3694218653184826 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2207 0.13289552677390237 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.021546296959782E-5 0.0 0.0 0.06557463917389202 0.0 2 6.021546296959782E-5 0.0 0.0 0.2368274158594282 0.0 3 6.021546296959782E-5 0.0 0.0 0.33232914012921033 0.0 4 6.021546296959782E-5 0.0 0.0 0.4773881904229715 0.0 5 6.021546296959782E-5 0.0 0.0 0.820315252034831 0.0 6 6.021546296959782E-5 0.0 0.0 1.066596495580486 0.0 7 6.021546296959782E-5 0.0 0.0 1.2458579288409788 0.0 8 6.021546296959782E-5 0.0 0.0 1.6826608972224413 0.0 9 6.021546296959782E-5 0.0 0.0 1.8043563478839986 0.0 10 6.021546296959782E-5 0.0 0.0 2.06617318087581 0.0 11 6.021546296959782E-5 0.0 0.0 2.512911700647256 0.0 12 6.021546296959782E-5 0.0 0.0 2.8628237559635887 0.0 13 6.021546296959782E-5 0.0 0.0 2.9932504487557376 0.0 14 6.021546296959782E-5 0.0 0.0 3.046179840706014 0.0 15 6.021546296959782E-5 0.0 0.0 3.14565578553179 0.0 16 6.021546296959782E-5 0.0 0.0 3.3460528462946115 0.0 17 6.021546296959782E-5 0.0 0.0 3.609495496786602 0.0 18 6.021546296959782E-5 0.0 0.0 3.8919662335769853 0.0 19 6.021546296959782E-5 0.0 0.0 4.084896576931577 0.0 20 6.021546296959782E-5 0.0 0.0 4.3010098735294635 0.0 21 6.021546296959782E-5 0.0 0.0 4.557889038557767 0.0 22 6.021546296959782E-5 0.0 0.0 4.86444596053599 0.0 23 6.021546296959782E-5 0.0 0.0 5.15643074047557 0.0 24 6.021546296959782E-5 0.0 0.0 5.379890323555747 0.0 25 6.021546296959782E-5 0.0 0.0 5.568846446354345 0.0 26 6.021546296959782E-5 0.0 0.0 5.7527444702634964 0.0 27 6.021546296959782E-5 0.0 0.0 5.9647631153794505 0.0 28 6.021546296959782E-5 0.0 0.0 6.182863522255334 0.0 29 6.021546296959782E-5 0.0 0.0 6.43197489256056 0.0 30 6.021546296959782E-5 0.0 0.0 6.735159748612485 0.0 31 6.021546296959782E-5 0.0 0.0 6.992159344566729 0.0 32 6.021546296959782E-5 0.0 0.0 7.2160404358876935 0.0 33 6.021546296959782E-5 0.0 0.0 7.451783973413669 0.0 34 6.021546296959782E-5 0.0 0.0 7.709566370386517 0.0 35 6.021546296959782E-5 0.0 0.0 8.012510364586564 0.0 36 6.021546296959782E-5 0.0 0.0 8.281854130449574 0.0 37 6.021546296959782E-5 0.0 0.0 8.556617287979849 0.0 38 6.021546296959782E-5 0.0 0.0 8.859501066716927 0.0 39 6.021546296959782E-5 0.0 0.0 9.397586443813253 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGCGT 30 2.1660871E-6 45.000004 15 CGCGAGT 60 0.0 45.000004 33 TCGATAG 30 2.1660871E-6 45.000004 1 TCGCTAA 30 2.1660871E-6 45.000004 23 GTATCCG 30 2.1660871E-6 45.000004 1 GCCCGTA 30 2.1660871E-6 45.000004 21 TGCGTCC 30 2.1660871E-6 45.000004 42 TCGCCGA 20 7.0341956E-4 45.0 38 CTATGCG 35 1.2123564E-7 45.0 1 TCGCACG 20 7.0341956E-4 45.0 1 CGCGGTC 25 3.8915583E-5 45.0 21 TCCGATC 20 7.0341956E-4 45.0 15 CTATCGT 25 3.8915583E-5 45.0 14 GCGAACC 20 7.0341956E-4 45.0 42 GCGAAAA 25 3.8915583E-5 45.0 43 GCGCGCA 20 7.0341956E-4 45.0 12 CTCCCGC 35 1.2123564E-7 45.0 30 CCGGACG 25 3.8915583E-5 45.0 27 CGCGCGG 55 1.8189894E-12 45.0 2 CGATTCG 20 7.0341956E-4 45.0 10 >>END_MODULE