##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547572_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1958454 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.417692731103205 31.0 31.0 33.0 30.0 34.0 2 31.84698900254997 31.0 31.0 34.0 30.0 34.0 3 32.02294309695301 33.0 31.0 34.0 30.0 34.0 4 35.728386267944 37.0 35.0 37.0 35.0 37.0 5 35.625732337854245 37.0 35.0 37.0 33.0 37.0 6 35.65344143901261 37.0 35.0 37.0 33.0 37.0 7 36.001175416936015 37.0 35.0 37.0 35.0 37.0 8 35.95043896869674 37.0 35.0 37.0 35.0 37.0 9 37.60185687281907 39.0 37.0 39.0 35.0 39.0 10 37.13826314021161 39.0 37.0 39.0 33.0 39.0 11 36.91378199334781 39.0 37.0 39.0 33.0 39.0 12 36.64903081716497 39.0 35.0 39.0 32.0 39.0 13 36.53734169911573 39.0 35.0 39.0 32.0 39.0 14 37.56867661941511 40.0 36.0 41.0 32.0 41.0 15 37.76925574968828 40.0 36.0 41.0 33.0 41.0 16 37.83568161417118 40.0 36.0 41.0 33.0 41.0 17 37.77030453612901 40.0 36.0 41.0 33.0 41.0 18 37.68814993867612 40.0 36.0 41.0 33.0 41.0 19 37.70196083237084 40.0 36.0 41.0 33.0 41.0 20 37.60342647823232 40.0 36.0 41.0 32.0 41.0 21 37.49197377114806 39.0 35.0 41.0 32.0 41.0 22 37.45051760214945 39.0 35.0 41.0 32.0 41.0 23 37.35962039445399 39.0 35.0 41.0 32.0 41.0 24 37.31040095912388 39.0 35.0 41.0 32.0 41.0 25 37.2479205536612 39.0 35.0 41.0 32.0 41.0 26 37.27671571555931 39.0 35.0 41.0 32.0 41.0 27 37.249292554229 39.0 35.0 41.0 32.0 41.0 28 37.202074697695224 39.0 35.0 41.0 32.0 41.0 29 37.185967094453076 39.0 35.0 41.0 32.0 41.0 30 37.10343413733486 39.0 35.0 41.0 31.0 41.0 31 37.0034787643723 39.0 35.0 41.0 31.0 41.0 32 36.92539421400758 39.0 35.0 41.0 31.0 41.0 33 36.8626641218022 39.0 35.0 41.0 31.0 41.0 34 36.804966059963625 39.0 35.0 41.0 31.0 41.0 35 36.71787287319488 39.0 35.0 41.0 30.0 41.0 36 36.688786665400364 39.0 35.0 41.0 30.0 41.0 37 36.65696258375229 39.0 35.0 41.0 30.0 41.0 38 36.53431073693842 39.0 35.0 41.0 30.0 41.0 39 36.47550261583882 39.0 35.0 41.0 30.0 41.0 40 36.41391985719348 39.0 35.0 41.0 30.0 41.0 41 36.35452453823271 39.0 35.0 41.0 30.0 41.0 42 36.33808504054729 39.0 35.0 41.0 30.0 41.0 43 36.31792883570408 39.0 35.0 41.0 30.0 41.0 44 36.23274378668072 39.0 35.0 41.0 30.0 41.0 45 36.15806140966293 39.0 35.0 40.0 30.0 41.0 46 36.156123656721064 38.0 35.0 40.0 30.0 41.0 47 36.1088317621961 38.0 35.0 40.0 29.0 41.0 48 36.021111039626156 38.0 35.0 40.0 29.0 41.0 49 35.949761904032464 38.0 35.0 40.0 29.0 41.0 50 35.85816210133095 38.0 35.0 40.0 29.0 41.0 51 35.410515130812364 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 3.0 11 6.0 12 7.0 13 8.0 14 19.0 15 45.0 16 102.0 17 237.0 18 520.0 19 983.0 20 1737.0 21 2809.0 22 4417.0 23 6589.0 24 9630.0 25 14026.0 26 19257.0 27 23315.0 28 27411.0 29 32824.0 30 40326.0 31 50343.0 32 63421.0 33 81800.0 34 130417.0 35 169098.0 36 141579.0 37 189485.0 38 308267.0 39 639555.0 40 214.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.56489353336867 24.917102980207858 29.787219919385393 11.730783567038081 2 29.96761731447356 25.774258675465443 30.45167259481203 13.806451415248965 3 29.31970830052684 25.387473997346888 31.434948178512233 13.857869523614033 4 27.068136397382837 27.920390267016735 30.368596862627356 14.642876472973072 5 25.227500875690723 31.73671681847008 28.49482295729182 14.540959348547375 6 23.41326372740948 40.92335076545071 25.156475464830937 10.506910042308883 7 89.14163927260994 3.4164703383383017 5.545854025675355 1.8960363633764183 8 89.18590888527379 3.2027813775559704 5.357746467366606 2.2535632698036308 9 83.82954105636384 6.211532157507912 6.950073884809141 3.0088529013191017 10 37.11790013959991 41.32376864608512 12.689141537151244 8.869189677163721 11 27.64726667054728 24.45607606816397 30.01127419893447 17.885383062354286 12 28.08097611687586 22.010167203314452 31.12899256250083 18.779864117308858 13 26.919396626114274 24.845209537727207 28.962998365036913 19.27239547112161 14 17.9645271219033 29.721198455516447 31.306632680675676 21.007641741904585 15 16.942802843467348 31.46624837754678 34.38896190566641 17.201986873319466 16 23.868163357423764 30.744097129674735 30.495329479272936 14.892410033628567 17 24.29906446615545 29.392010228476135 27.296837199137684 19.01208810623073 18 22.587561413237175 30.57636278411441 29.421880728370436 17.414195074277977 19 23.870767452286344 30.613994507912874 27.486578699320997 18.028659340479784 20 24.59608446254035 32.51038829607435 27.67677974565652 15.216747495728775 21 25.671933065571107 27.322112237509792 31.26864353209215 15.73731116482695 22 24.45735258525347 23.072382603829347 32.242319707279314 20.22794510363787 23 20.378829423616793 26.941046355952196 32.875472183671405 19.804652036759606 24 19.796124902601747 28.65556198920169 32.55537275830834 18.99294034988823 25 20.77628578460357 30.919950123924277 28.69860614545963 19.60515794601252 26 19.6146552331584 34.007640720690915 26.718779200328424 19.658924845822266 27 18.47380637993029 32.38891492983751 30.80077448844854 18.33650420178365 28 17.203722936561185 30.7906644730997 33.136698640866726 18.86891394947239 29 18.93779481162182 29.303317821097664 31.7614301893228 19.997457177957713 30 20.42738813370138 29.056541537355486 31.21926785107028 19.296802477872852 31 22.487839898205422 28.96468336759505 29.114801777320277 19.432674956879254 32 23.207591293949207 29.454151080393004 28.8935558353681 18.444701790289688 33 21.917594183983898 28.569218373267898 29.775373840794835 19.737813601953377 34 19.586061250353595 28.907444341301865 30.561606246559787 20.944888161784757 35 19.307116735956015 29.69051098468486 29.99084992550246 21.011522353856666 36 21.9344442095653 28.770448527256704 29.5537704740576 19.741336789120396 37 19.88522579544886 30.544756220978385 29.308117525354184 20.261900458218573 38 20.294272931608297 30.499567516010078 28.981329150442136 20.22483040193949 39 20.42473297815522 29.84200803286674 28.667969735311626 21.06528925366641 40 21.131361778218942 28.41373859176677 30.198666907673093 20.256232722341196 41 20.342984823743627 27.281570054747267 30.113497687461642 22.261947434047467 42 20.173871839726644 27.912220557643934 29.522163910921574 22.39174369170785 43 20.088038830628648 28.47005852575552 29.308372828772082 22.13352981484375 44 20.736662694145483 28.739914238475862 29.189248253979926 21.334174813398732 45 19.392337016851048 30.08638446448066 29.03029634599536 21.490982172672936 46 20.622848430445647 29.281514909209 29.255116535798138 20.84052012454722 47 19.61981236219998 29.074668080026388 29.625051188335288 21.680468369438344 48 19.20969295168536 29.711701168370563 30.439520152119986 20.63908572782409 49 21.032712537542366 28.55660638442363 30.061671093627933 20.349009984406067 50 19.28761155482845 29.50669252379683 30.390501895883183 20.815194025491536 51 18.698013841530106 29.333035138941227 29.657678965142914 22.311272054385757 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1436.0 1 2405.5 2 3375.0 3 7811.5 4 12248.0 5 8843.5 6 5439.0 7 5484.5 8 5530.0 9 5907.0 10 6284.0 11 6298.0 12 6312.0 13 6376.5 14 6441.0 15 6242.0 16 6043.0 17 5801.5 18 5560.0 19 7388.0 20 9216.0 21 9413.5 22 9611.0 23 11449.0 24 13287.0 25 17764.0 26 26621.5 27 31002.0 28 36999.0 29 42996.0 30 51240.5 31 59485.0 32 67120.5 33 74756.0 34 82005.5 35 89255.0 36 94749.0 37 100243.0 38 106214.5 39 112186.0 40 122324.5 41 132463.0 42 139509.5 43 146556.0 44 149642.0 45 152728.0 46 159819.0 47 166910.0 48 165030.5 49 163151.0 50 151197.0 51 139243.0 52 123161.5 53 107080.0 54 99125.0 55 91170.0 56 82590.5 57 74011.0 58 66798.0 59 59585.0 60 50129.0 61 40673.0 62 34022.5 63 27372.0 64 21644.0 65 15916.0 66 12592.5 67 9269.0 68 7044.0 69 4819.0 70 3568.0 71 2317.0 72 1748.0 73 1179.0 74 849.5 75 376.0 76 232.0 77 241.5 78 251.0 79 141.5 80 32.0 81 23.5 82 15.0 83 10.5 84 6.0 85 4.5 86 3.0 87 3.0 88 3.0 89 2.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 1.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1958454.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.475395017330424 #Duplication Level Percentage of deduplicated Percentage of total 1 75.90514361144265 13.26472368457155 2 9.672212447238957 3.380514664140819 3 3.4433952088108644 1.8052407442425853 4 1.6785299453687632 1.173318953749488 5 0.9681879271931296 0.8459733239355144 6 0.6407310588598346 0.6718217012068799 7 0.4519581750824061 0.5528703348613782 8 0.3723878107776108 0.5206099274382116 9 0.2921438399960828 0.459479610523019 >10 3.4572106731929604 14.556151083419122 >50 1.551800986818902 19.8138551318466 >100 1.5600840199942088 41.65289423039597 >500 0.004142863482467655 0.5191466338917536 >1k 0.0017755129210575665 0.4078602949999264 >5k 2.9591882017626105E-4 0.37553968077716054 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7262 0.37080268415801443 No Hit ACCATACGGAAAGAGTTCCGAACCCGCATGGTTATGAACAATGGACTCAAC 2133 0.10891243807615597 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.1060683580007495E-5 0.0 0.0 0.04758855709656699 0.0 2 5.1060683580007495E-5 0.0 0.0 0.1819802762791467 0.0 3 5.1060683580007495E-5 0.0 0.0 0.2691408631502195 0.0 4 5.1060683580007495E-5 0.0 0.0 0.39214604989445756 0.0 5 5.1060683580007495E-5 0.0 0.0 0.7115306256874044 0.0 6 5.1060683580007495E-5 0.0 0.0 0.967651014524722 0.0 7 5.1060683580007495E-5 0.0 0.0 1.1410530959624274 0.0 8 5.1060683580007495E-5 0.0 0.0 1.539071124468586 0.0 9 5.1060683580007495E-5 0.0 0.0 1.655642665081743 0.0 10 5.1060683580007495E-5 0.0 0.0 1.9205965521784019 0.0 11 5.1060683580007495E-5 0.0 0.0 2.365998895046807 0.0 12 5.1060683580007495E-5 0.0 0.0 2.7105053271611177 0.0 13 5.1060683580007495E-5 0.0 0.0 2.8419865873796373 0.0 14 5.1060683580007495E-5 0.0 0.0 2.8996851598250455 0.0 15 5.1060683580007495E-5 0.0 0.0 2.9991003107553205 0.0 16 5.1060683580007495E-5 0.0 0.0 3.206253504039411 0.0 17 5.1060683580007495E-5 0.0 0.0 3.469777691995829 0.0 18 5.1060683580007495E-5 0.0 0.0 3.7437182594025695 0.0 19 5.1060683580007495E-5 0.0 0.0 3.941680529642259 0.0 20 5.1060683580007495E-5 0.0 0.0 4.165581627140591 0.0 21 5.1060683580007495E-5 0.0 0.0 4.42507202109419 0.0 22 5.1060683580007495E-5 0.0 0.0 4.722908988416373 0.0 23 5.1060683580007495E-5 0.0 0.0 5.018754589078937 0.0 24 5.1060683580007495E-5 0.0 0.0 5.224171719121307 0.0 25 5.1060683580007495E-5 0.0 0.0 5.419836258599895 0.0 26 5.1060683580007495E-5 0.0 0.0 5.604267447690883 0.0 27 5.1060683580007495E-5 0.0 0.0 5.814075796521133 0.0 28 5.1060683580007495E-5 0.0 0.0 6.021790657324604 0.0 29 5.1060683580007495E-5 0.0 0.0 6.258099500932879 0.0 30 5.1060683580007495E-5 0.0 0.0 6.54005659566168 0.0 31 5.1060683580007495E-5 0.0 0.0 6.783922420439796 0.0 32 5.1060683580007495E-5 0.0 0.0 6.993883951320787 0.0 33 5.1060683580007495E-5 0.0 0.0 7.223554906063661 0.0 34 5.1060683580007495E-5 0.0 0.0 7.480236962420358 0.0 35 5.1060683580007495E-5 0.0 0.0 7.7500926751406976 0.0 36 5.1060683580007495E-5 0.0 0.0 7.991507587106973 0.0 37 5.1060683580007495E-5 0.0 0.0 8.246708883639851 0.0 38 5.1060683580007495E-5 0.0 0.0 8.528972342470132 0.0 39 5.1060683580007495E-5 0.0 0.0 9.002253818573221 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATCGT 35 1.2125201E-7 45.000004 41 CCGTCGA 25 3.8918144E-5 45.000004 10 CGTACGT 35 1.2125201E-7 45.000004 25 CGTCGCG 30 2.1662872E-6 45.000004 45 GCTACGC 25 3.8918144E-5 45.000004 10 CGGTATG 25 3.8918144E-5 45.000004 38 CGCGTGA 25 3.8918144E-5 45.000004 23 ATCGCAC 60 0.0 45.000004 19 CACGGTA 20 7.034506E-4 45.0 11 CCGTACA 20 7.034506E-4 45.0 25 CGACTCG 20 7.034506E-4 45.0 11 TCGACGC 20 7.034506E-4 45.0 25 TATCCGG 20 7.034506E-4 45.0 2 GTCGGTA 70 0.0 41.785717 42 CGTTTTT 3480 0.0 41.314655 1 TACGGGT 120 0.0 41.250004 4 CGGGATA 530 0.0 41.179245 6 TATAGCG 175 0.0 41.14286 1 CCGAACC 285 0.0 41.05263 18 TGCACGG 105 0.0 40.714287 2 >>END_MODULE