SRR1547571_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547571_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2537182
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12948	0.510329964503926	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCGGTA	20	7.0348993E-4	45.0	39
CGCGAAG	55	1.8189894E-12	45.0	2
TACGACG	20	7.0348993E-4	45.0	1
GTCCGCG	20	7.0348993E-4	45.0	9
ACGTACT	40	6.8212103E-9	45.0	10
CGACTTA	20	7.0348993E-4	45.0	15
CGCGTCA	20	7.0348993E-4	45.0	33
CCGCCGA	25	3.8921426E-5	45.0	38
AATCGCG	45	3.8562575E-10	45.0	1
TACCGAT	25	3.8921426E-5	45.0	23
ACGCGTC	20	7.0348993E-4	45.0	32
GCGAACG	30	2.1665437E-6	44.999996	1
CGTCGGG	115	0.0	43.04348	3
CGTTTTT	7095	0.0	42.145874	1
TTTCGCG	75	0.0	42.0	1
CTAAGCG	70	0.0	41.785713	1
GCTATCG	65	0.0	41.53846	9
CGTAAGG	305	0.0	41.311478	2
TCGACGT	60	3.6379788E-12	41.249996	26
CTCGCGC	105	0.0	40.714287	33