##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547571_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2537182 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.525853486269412 31.0 31.0 33.0 30.0 34.0 2 31.955357558109746 31.0 31.0 34.0 30.0 34.0 3 32.097151091250055 33.0 31.0 34.0 30.0 34.0 4 35.80465650473636 37.0 35.0 37.0 35.0 37.0 5 35.74006161166207 37.0 35.0 37.0 33.0 37.0 6 35.77691509714321 37.0 35.0 37.0 35.0 37.0 7 36.08637259762997 37.0 35.0 37.0 35.0 37.0 8 36.05388970913399 37.0 35.0 37.0 35.0 37.0 9 37.737272690725376 39.0 38.0 39.0 35.0 39.0 10 37.31664224324467 39.0 37.0 39.0 34.0 39.0 11 37.06683517382671 39.0 37.0 39.0 33.0 39.0 12 36.85123534693215 39.0 35.0 39.0 33.0 39.0 13 36.77837813763459 39.0 35.0 39.0 33.0 39.0 14 37.88921094347981 40.0 37.0 41.0 33.0 41.0 15 38.07240276811045 40.0 37.0 41.0 33.0 41.0 16 38.12034887524821 40.0 37.0 41.0 33.0 41.0 17 38.057887451511164 40.0 37.0 41.0 33.0 41.0 18 37.96169569230745 40.0 36.0 41.0 33.0 41.0 19 37.955723712370656 40.0 36.0 41.0 33.0 41.0 20 37.86113530680889 40.0 36.0 41.0 33.0 41.0 21 37.747322817204285 40.0 36.0 41.0 33.0 41.0 22 37.69607462137127 40.0 36.0 41.0 33.0 41.0 23 37.59405434848584 39.0 35.0 41.0 33.0 41.0 24 37.55030699413759 39.0 35.0 41.0 33.0 41.0 25 37.51174649670382 39.0 35.0 41.0 33.0 41.0 26 37.527398901616046 39.0 35.0 41.0 33.0 41.0 27 37.50830764210057 39.0 35.0 41.0 33.0 41.0 28 37.449801787967914 39.0 35.0 41.0 33.0 41.0 29 37.43348880766141 39.0 35.0 41.0 32.0 41.0 30 37.36333656789304 39.0 35.0 41.0 32.0 41.0 31 37.2338566961298 39.0 35.0 41.0 32.0 41.0 32 37.12808580543296 39.0 35.0 41.0 31.0 41.0 33 37.03588902963997 40.0 35.0 41.0 31.0 41.0 34 36.95367695340736 40.0 35.0 41.0 31.0 41.0 35 36.85494339783271 40.0 35.0 41.0 31.0 41.0 36 36.81288295439586 39.0 35.0 41.0 31.0 41.0 37 36.79660111099637 39.0 35.0 41.0 31.0 41.0 38 36.666104757167595 39.0 35.0 41.0 30.0 41.0 39 36.61464451505647 39.0 35.0 41.0 30.0 41.0 40 36.5593315733755 39.0 35.0 41.0 30.0 41.0 41 36.51635830618379 39.0 35.0 41.0 30.0 41.0 42 36.50853545390122 39.0 35.0 41.0 30.0 41.0 43 36.4954445522631 39.0 35.0 41.0 30.0 41.0 44 36.38896736615663 39.0 35.0 41.0 30.0 41.0 45 36.32870838591792 39.0 35.0 41.0 30.0 41.0 46 36.295437221295124 39.0 35.0 41.0 30.0 41.0 47 36.25977797414612 39.0 35.0 41.0 30.0 41.0 48 36.1578932847545 39.0 35.0 40.0 30.0 41.0 49 36.10283889764313 39.0 35.0 40.0 29.0 41.0 50 36.01694123637957 38.0 35.0 40.0 29.0 41.0 51 35.597641793139005 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 5.0 11 11.0 12 5.0 13 5.0 14 20.0 15 41.0 16 88.0 17 219.0 18 526.0 19 1076.0 20 1887.0 21 3109.0 22 4843.0 23 7767.0 24 11808.0 25 18156.0 26 25012.0 27 29514.0 28 33045.0 29 37878.0 30 45990.0 31 57743.0 32 73821.0 33 97423.0 34 155653.0 35 210324.0 36 180549.0 37 246761.0 38 410575.0 39 883060.0 40 266.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.77801907785882 24.612030197281868 29.702480941453945 12.907469783405368 2 30.728619389543198 25.032496683328198 30.963919813399276 13.274964113729325 3 29.74705795642567 24.455557386107895 32.842381823613756 12.955002833852674 4 26.461483646029333 28.010012683362877 31.302208513224517 14.22629515738327 5 24.254428732349513 32.06498390734287 29.483891971486475 14.19669538882114 6 22.45136533366546 40.80736029185135 26.45226081534553 10.289013559137658 7 89.0549830481219 3.408860696631144 5.830287302999943 1.7058689522470205 8 89.85118135001746 2.7708299995822134 5.712597677265565 1.6653909731347611 9 84.52952921784878 5.940921857399272 7.035522087102936 2.4940268376490136 10 38.120324044550216 40.4094385030321 13.134611549348845 8.335625903068838 11 25.725115502159486 25.722790087585363 30.91201183044811 17.640082579807046 12 26.38569089643549 23.447431047516496 31.59446188724341 18.572416168804605 13 25.038881719955448 25.43211326582011 30.739576427706012 18.78942858651843 14 18.03075222825954 30.2739023057865 31.442482249992317 20.252863215961643 15 17.380857975501954 31.752511250671024 34.136534154822165 16.730096619004865 16 22.762222024277328 30.58712382477883 31.665722049108027 14.984932101835815 17 22.872265371581545 29.36919779503402 28.435918274684273 19.322618558700164 18 21.945213232633687 29.711073151236295 31.02110924640014 17.322604369729884 19 23.479159161621045 29.938017848148064 28.94061206488143 17.642210925349463 20 24.51318037097851 31.102656411719774 29.088689735304758 15.295473481996954 21 25.16441469315169 26.622134320675457 32.704669984258125 15.508781001914723 22 24.460050560030773 22.785121445761476 32.957036586259875 19.797791407947873 23 20.15673294229582 27.00779841572264 33.516003187788655 19.31946545419288 24 19.15373039852876 28.799155913923403 33.458616685756084 18.58849700179175 25 20.29846498989824 30.958401880511527 29.786353521347703 18.95677960824253 26 20.534593103687477 33.533148193547014 27.336036594930913 18.5962221078346 27 18.947596191365065 31.95111742082358 31.21612876017566 17.8851576276357 28 17.13842365269815 30.44645594994762 33.53882378166013 18.876296615694105 29 18.627122532005984 29.502692357111158 32.85046165391367 19.01972345696919 30 20.3816675350842 28.330880480785375 32.51619316233522 18.771258821795204 31 21.75965303238002 28.749336862708315 30.536674152662286 18.954335952249384 32 22.165496996273816 28.715795713512076 30.90491734530672 18.213789944907383 33 22.3133381838591 28.86245448690713 29.42504715861929 19.399160170614486 34 19.694211924883593 29.056764552168506 31.286285335462733 19.962738187485172 35 19.843629664722513 29.3085005332688 31.058473534811455 19.78939626719723 36 22.016197497853916 29.087862045371597 30.471483716974184 18.4244567398003 37 20.5331742066592 29.631772572878102 30.62653763111988 19.208515589342824 38 20.363497770360976 30.583103616532043 29.25272999729621 19.80066861581077 39 20.461086354861415 29.547269372082884 29.567409827123164 20.424234445932534 40 21.54279826989156 29.092118736456428 29.575489657423077 19.789593336228933 41 19.338896460719017 29.25336061819767 29.809410598057212 21.5983323230261 42 20.106204442566593 28.736409134228445 30.315405043863624 20.84198137934133 43 20.445320832325 28.454442763664566 30.29230855334777 20.807927850662665 44 20.281990018847683 29.412947120072587 30.412954214557725 19.892108646522008 45 19.958875634463745 30.1800974466948 29.01589243499284 20.845134483848614 46 20.64952376297798 30.053145576470275 29.56212837707346 19.735202283478284 47 20.636517206885436 29.502101150016042 29.92560249915063 19.93577914394789 48 19.546843702974403 29.76057689200065 30.570175888052177 20.122403516972767 49 20.992896843821214 28.221152443931892 30.24166181219952 20.544288900047373 50 20.022134793641133 29.739254022770144 30.083888345416295 20.15472283817243 51 19.528634524444836 29.85867785598353 29.915551978533667 20.69713564103797 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1446.0 1 2659.0 2 3872.0 3 12644.0 4 21416.0 5 15213.5 6 9011.0 7 8901.5 8 8792.0 9 9301.5 10 9811.0 11 10072.0 12 10333.0 13 10243.0 14 10153.0 15 9697.5 16 9242.0 17 9428.5 18 9615.0 19 10048.0 20 10481.0 21 13166.0 22 15851.0 23 17818.0 24 19785.0 25 25563.5 26 36708.5 27 42075.0 28 48602.0 29 55129.0 30 65345.0 31 75561.0 32 87271.0 33 98981.0 34 112041.5 35 125102.0 36 127762.0 37 130422.0 38 143724.5 39 157027.0 40 166437.5 41 175848.0 42 187871.0 43 199894.0 44 200033.5 45 200173.0 46 205337.5 47 210502.0 48 206410.0 49 202318.0 50 186761.0 51 171204.0 52 158092.0 53 144980.0 54 126247.5 55 107515.0 56 98023.0 57 88531.0 58 78888.5 59 69246.0 60 57657.0 61 46068.0 62 37781.0 63 29494.0 64 23296.0 65 17098.0 66 12918.0 67 8738.0 68 6937.5 69 5137.0 70 3959.0 71 2781.0 72 1934.0 73 1087.0 74 813.5 75 364.0 76 188.0 77 205.5 78 223.0 79 135.5 80 48.0 81 61.5 82 75.0 83 51.0 84 27.0 85 20.5 86 14.0 87 9.0 88 4.0 89 2.0 90 0.0 91 0.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2537182.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.987969322815434 #Duplication Level Percentage of deduplicated Percentage of total 1 76.21995018156898 12.948221754710145 2 9.195792651727242 3.1243568693302795 3 3.307173400115055 1.685464807991573 4 1.6453762747669933 1.1180640672092008 5 0.9822300578292025 0.8343047045174862 6 0.6465494463588181 0.6590137296256143 7 0.503231482311351 0.5984216688646118 8 0.3929980700463481 0.5340991326298427 9 0.3088199449179955 0.47216013754864145 >10 3.6604074379199174 14.962234325785545 >50 1.5075110843677015 18.607388174707488 >100 1.6231380834884308 43.00700665913215 >500 0.005175222786332435 0.609541259116045 >1k 0.0014114243962724822 0.3222939916587493 >5k 0.0 0.0 >10k+ 2.3523739937874704E-4 0.5174287171726579 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12948 0.510329964503926 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.882761268210164E-5 0.0 0.0 0.049227844119972476 0.0 2 7.882761268210164E-5 0.0 0.0 0.16439498624852297 0.0 3 7.882761268210164E-5 0.0 0.0 0.23900532165213217 0.0 4 7.882761268210164E-5 0.0 0.0 0.335805630025753 0.0 5 7.882761268210164E-5 0.0 0.0 0.5844279204251015 0.0 6 7.882761268210164E-5 0.0 0.0 0.802701579941841 0.0 7 7.882761268210164E-5 0.0 0.0 0.9536170444217246 0.0 8 7.882761268210164E-5 0.0 0.0 1.274208945199832 0.0 9 7.882761268210164E-5 0.0 0.0 1.3772760487816798 0.0 10 7.882761268210164E-5 0.0 0.0 1.5856568429068154 0.0 11 7.882761268210164E-5 0.0 0.0 1.9270198196266566 0.0 12 7.882761268210164E-5 0.0 0.0 2.2007092908589136 0.0 13 7.882761268210164E-5 0.0 0.0 2.3035399116027153 0.0 14 7.882761268210164E-5 0.0 0.0 2.3471709952222586 0.0 15 7.882761268210164E-5 0.0 0.0 2.4185099846995604 0.0 16 7.882761268210164E-5 0.0 0.0 2.5754557615496245 0.0 17 7.882761268210164E-5 0.0 0.0 2.7923105240380863 0.0 18 7.882761268210164E-5 0.0 0.0 3.016141530248914 0.0 19 7.882761268210164E-5 0.0 0.0 3.189049898667104 0.0 20 7.882761268210164E-5 0.0 0.0 3.3645595783038034 0.0 21 7.882761268210164E-5 0.0 0.0 3.58236027214445 0.0 22 7.882761268210164E-5 0.0 0.0 3.8376040820090953 0.0 23 7.882761268210164E-5 0.0 0.0 4.087999993693791 0.0 24 7.882761268210164E-5 0.0 0.0 4.277777471225951 0.0 25 7.882761268210164E-5 0.0 0.0 4.446232079527602 0.0 26 7.882761268210164E-5 0.0 0.0 4.611415341902946 0.0 27 7.882761268210164E-5 0.0 0.0 4.7966208178995435 0.0 28 7.882761268210164E-5 0.0 0.0 4.9906944003228775 0.0 29 7.882761268210164E-5 0.0 0.0 5.2129488542800635 0.0 30 7.882761268210164E-5 0.0 0.0 5.470675733944195 0.0 31 7.882761268210164E-5 0.0 0.0 5.693324325964791 0.0 32 7.882761268210164E-5 0.0 0.0 5.896936049522659 0.0 33 7.882761268210164E-5 0.0 0.0 6.113278432528688 0.0 34 7.882761268210164E-5 0.0 0.0 6.338134197704382 0.0 35 7.882761268210164E-5 0.0 0.0 6.581002072377937 0.0 36 7.882761268210164E-5 0.0 0.0 6.820598601125186 0.0 37 7.882761268210164E-5 0.0 0.0 7.070915685197199 0.0 38 7.882761268210164E-5 0.0 0.0 7.34326508701386 0.0 39 7.882761268210164E-5 0.0 0.0 7.747296015815972 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGGTA 20 7.0348993E-4 45.0 39 CGCGAAG 55 1.8189894E-12 45.0 2 TACGACG 20 7.0348993E-4 45.0 1 GTCCGCG 20 7.0348993E-4 45.0 9 ACGTACT 40 6.8212103E-9 45.0 10 CGACTTA 20 7.0348993E-4 45.0 15 CGCGTCA 20 7.0348993E-4 45.0 33 CCGCCGA 25 3.8921426E-5 45.0 38 AATCGCG 45 3.8562575E-10 45.0 1 TACCGAT 25 3.8921426E-5 45.0 23 ACGCGTC 20 7.0348993E-4 45.0 32 GCGAACG 30 2.1665437E-6 44.999996 1 CGTCGGG 115 0.0 43.04348 3 CGTTTTT 7095 0.0 42.145874 1 TTTCGCG 75 0.0 42.0 1 CTAAGCG 70 0.0 41.785713 1 GCTATCG 65 0.0 41.53846 9 CGTAAGG 305 0.0 41.311478 2 TCGACGT 60 3.6379788E-12 41.249996 26 CTCGCGC 105 0.0 40.714287 33 >>END_MODULE