##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547570_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2277239 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.505077420507906 31.0 31.0 33.0 30.0 34.0 2 31.942964704187833 31.0 31.0 34.0 30.0 34.0 3 32.10095953916124 33.0 31.0 34.0 30.0 34.0 4 35.79466055165927 37.0 35.0 37.0 35.0 37.0 5 35.715051428506186 37.0 35.0 37.0 33.0 37.0 6 35.74726807331159 37.0 35.0 37.0 33.0 37.0 7 36.04250410255577 37.0 35.0 37.0 35.0 37.0 8 35.98544772858712 37.0 35.0 37.0 35.0 37.0 9 37.67953297831277 39.0 38.0 39.0 35.0 39.0 10 37.2569220885467 39.0 37.0 39.0 34.0 39.0 11 37.01667896957675 39.0 37.0 39.0 33.0 39.0 12 36.425221507272624 38.0 35.0 39.0 33.0 39.0 13 36.140441561030705 38.0 35.0 39.0 32.0 39.0 14 37.07601090618947 39.0 35.0 41.0 31.0 41.0 15 37.363455043585674 39.0 35.0 41.0 32.0 41.0 16 37.50097903645599 39.0 35.0 41.0 33.0 41.0 17 37.45676365107044 39.0 35.0 41.0 33.0 41.0 18 37.391387992213375 39.0 35.0 41.0 32.0 41.0 19 37.3856090643099 39.0 35.0 41.0 32.0 41.0 20 37.27603821996725 39.0 35.0 41.0 32.0 41.0 21 37.14580068231749 39.0 35.0 41.0 32.0 41.0 22 37.103875350808586 39.0 35.0 41.0 32.0 41.0 23 37.06739784449502 39.0 35.0 41.0 32.0 41.0 24 37.02745517708067 39.0 35.0 41.0 32.0 41.0 25 36.95579603194921 38.0 35.0 41.0 32.0 41.0 26 36.99024432657266 39.0 35.0 41.0 32.0 41.0 27 36.97075098397665 39.0 35.0 41.0 32.0 41.0 28 36.94458816136558 39.0 35.0 41.0 32.0 41.0 29 36.9370795072454 39.0 35.0 41.0 32.0 41.0 30 36.85185744667117 38.0 35.0 41.0 32.0 41.0 31 36.700374444667425 38.0 35.0 41.0 31.0 41.0 32 36.617800327501854 38.0 35.0 41.0 31.0 41.0 33 36.53566972987903 38.0 35.0 41.0 31.0 41.0 34 36.43719258277238 38.0 35.0 41.0 30.0 41.0 35 36.36522516960231 38.0 35.0 41.0 30.0 41.0 36 36.311660304430056 38.0 35.0 41.0 30.0 41.0 37 36.27651906541211 38.0 35.0 41.0 30.0 41.0 38 36.15060562373998 38.0 35.0 41.0 30.0 41.0 39 36.121864679113614 38.0 35.0 41.0 30.0 41.0 40 36.033063723219215 38.0 35.0 41.0 30.0 41.0 41 35.99202718730884 38.0 35.0 41.0 30.0 41.0 42 36.00611486102249 38.0 35.0 40.0 30.0 41.0 43 35.971497062890634 38.0 35.0 40.0 30.0 41.0 44 35.87181582609467 38.0 35.0 40.0 30.0 41.0 45 35.78456674947162 38.0 35.0 40.0 29.0 41.0 46 35.80158779996302 38.0 35.0 40.0 29.0 41.0 47 35.74734448162885 38.0 35.0 40.0 29.0 41.0 48 35.67527870372851 38.0 35.0 40.0 29.0 41.0 49 35.625781922758215 38.0 35.0 40.0 29.0 41.0 50 35.528612499610276 37.0 34.0 40.0 29.0 41.0 51 35.11275145033086 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 2.0 10 5.0 11 9.0 12 12.0 13 28.0 14 30.0 15 42.0 16 115.0 17 311.0 18 606.0 19 1173.0 20 2134.0 21 3358.0 22 5435.0 23 8152.0 24 12167.0 25 17722.0 26 23942.0 27 28586.0 28 32872.0 29 38472.0 30 47447.0 31 59088.0 32 77010.0 33 103448.0 34 187944.0 35 267552.0 36 150271.0 37 201666.0 38 327914.0 39 679510.0 40 213.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.82049007592088 23.63871337176291 31.035609349743265 12.50518720257294 2 31.23449053876207 25.759175914341885 29.69661945891494 13.309714087981103 3 30.485118162827877 24.361562400784457 31.547588988244097 13.605730448143563 4 27.033438299625118 27.54756966660065 30.74126167696935 14.677730356804886 5 24.549553208951718 31.239452688101686 28.932887588874074 15.278106514072523 6 22.696914992234017 40.80621313792711 25.931577669274063 10.565294200564807 7 88.26987417657962 3.7687743798520925 5.8313598177442065 2.129991625824079 8 88.49765000511584 2.9903317130964293 6.026640155029841 2.4853781267578854 9 84.23819370737986 5.621544335047837 7.112692168015741 3.027569789556564 10 43.23239677521771 31.38757065024795 14.115426619691654 11.264605954842684 11 36.28424596627758 24.329769514750097 23.782747441089846 15.60323707788247 12 36.487781914853905 21.27646680914915 25.981243075496245 16.254508200500695 13 26.56401018953215 28.33352142660476 25.996085610689086 19.106382773174005 14 16.844960059089097 32.709610190234756 30.19204396200838 20.253385788667767 15 17.439451897670818 27.761995996028528 38.721363897245745 16.077188209054913 16 23.47526983333765 26.880226449661194 34.87143861491921 14.77306510208195 17 22.847579898289112 26.876230382493887 26.32617832383865 23.95001139537835 18 23.37927639567037 28.733479445943093 30.959288858130396 16.92795530025614 19 27.12135177730576 29.466340599295904 25.67222851883355 17.74007910456478 20 29.13484267571388 29.38896619985869 25.493239839999227 15.982951284428204 21 25.29896949771192 28.383406396957017 30.09209836999981 16.22552573533125 22 23.564764172754813 23.531829553244084 31.29447545909762 21.608930814903488 23 20.837645938788153 27.34895195453793 30.922709474060472 20.89069263261344 24 21.803508546972893 26.750244484658836 34.12426188028574 17.321985088082542 25 21.638176757029015 27.543485773781317 30.288564353587834 20.52977311560183 26 19.0437630832776 32.7956793292228 27.707061050684622 20.453496536814978 27 18.085409568341312 32.587752098045044 31.405838385869906 17.920999947743738 28 16.790420329179327 29.952850798708436 33.929245019956184 19.327483852156053 29 19.00037721117546 28.692552692097756 32.88811582798292 19.41895426874386 30 20.72654648897195 28.71714387466577 31.964848661032065 18.59146097533021 31 24.808682795262158 27.39225000098804 28.313409352290208 19.485657851459596 32 26.16352521628165 27.421671594417624 28.865832703550222 17.548970485750505 33 25.40980547057204 27.794579312931138 27.66727603031566 19.12833918618116 34 19.70983282826265 28.718022131186054 30.452886148533377 21.11925889201792 35 19.82233748851131 28.912819427385532 30.679915459027356 20.584927625075807 36 24.940333447653057 28.019237330820353 28.38806115651453 18.65236806501206 37 21.119698020278065 31.4721028403255 28.911414216953073 18.496784922443364 38 21.635849377250256 30.160163250321993 27.43045415962049 20.773533212807262 39 20.45384783942309 28.944129272333736 29.385277522473487 21.216745365769686 40 23.684997490381992 27.207377003467798 27.619411049960064 21.48821445619015 41 18.329784445110946 26.72639982013306 29.327488243438655 25.616327491317335 42 20.812966930568113 27.338808091728623 28.180309576640834 23.667915401062427 43 21.26136079700023 26.58877702340422 28.651098984340244 23.498763195255307 44 21.1633912821623 27.96004284135306 29.188065020843222 21.688500855641415 45 19.975549338475233 31.244107447659204 26.325783108404522 22.454560105461045 46 21.995407596655422 30.23586896237066 26.89340029746548 20.875323143508435 47 19.678215593532343 28.42319141732598 29.234744354896435 22.66384863424524 48 21.41852480130544 27.350093688014304 30.798787479048094 20.432594031632163 49 21.830427109319665 26.81896805737123 29.80420588265 21.54639895065911 50 20.225018103062524 29.268952446361578 29.207123187333433 21.29890626324246 51 18.416775753445293 30.013274847304128 28.850726691401295 22.719222707849283 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1674.0 1 2867.0 2 4060.0 3 9060.5 4 14061.0 5 10186.0 6 6311.0 7 6348.5 8 6386.0 9 6888.5 10 7391.0 11 7437.5 12 7484.0 13 7385.5 14 7287.0 15 7342.5 16 7398.0 17 7233.0 18 7068.0 19 6748.0 20 6428.0 21 7329.5 22 8231.0 23 10841.5 24 13452.0 25 14977.0 26 23799.0 27 31096.0 28 33130.0 29 35164.0 30 40025.5 31 44887.0 32 54712.5 33 64538.0 34 71596.0 35 78654.0 36 91561.0 37 104468.0 38 116243.5 39 128019.0 40 140171.0 41 152323.0 42 168716.0 43 185109.0 44 189639.5 45 194170.0 46 195131.0 47 196092.0 48 194607.0 49 193122.0 50 182228.0 51 171334.0 52 149713.0 53 128092.0 54 119856.0 55 111620.0 56 106765.5 57 101911.0 58 93704.5 59 85498.0 60 75880.5 61 66263.0 62 55249.0 63 44235.0 64 34555.0 65 24875.0 66 18511.5 67 12148.0 68 8528.5 69 4909.0 70 3842.0 71 2775.0 72 1990.5 73 1206.0 74 855.0 75 365.0 76 226.0 77 145.5 78 65.0 79 112.0 80 159.0 81 87.0 82 15.0 83 14.0 84 13.0 85 9.0 86 5.0 87 5.0 88 5.0 89 4.0 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2277239.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.968552664041765 #Duplication Level Percentage of deduplicated Percentage of total 1 74.93807240675841 10.467764109555798 2 10.47614472993457 2.9267315875242925 3 3.9892803961526826 1.6717341991586445 4 2.088798466369766 1.16709965528223 5 1.2137933689182983 0.8477468298499963 6 0.8211434751207345 0.6882111526174949 7 0.550787632201369 0.538559423297538 8 0.3947905466769157 0.4411722034017868 9 0.29470915913578755 0.37049943689673415 >10 2.5227542908437357 7.61123238334349 >50 0.7696602728571494 7.967640412804042 >100 1.909826338012021 62.125384291660346 >500 0.026737568732159975 2.2692334445465687 >1k 0.003183043896685711 0.5577378045024621 >5k 3.1830438966857117E-4 0.349253065558581 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7855 0.3449352483424006 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.391282601430943E-5 0.0 0.0 0.047689329051540046 0.0 2 4.391282601430943E-5 0.0 0.0 0.20208682531785202 0.0 3 4.391282601430943E-5 0.0 0.0 0.29715809363883194 0.0 4 4.391282601430943E-5 0.0 0.0 0.46292901184285007 0.0 5 4.391282601430943E-5 0.0 0.0 0.810894245180238 0.0 6 4.391282601430943E-5 0.0 0.0 1.087632874722416 0.0 7 4.391282601430943E-5 0.0 0.0 1.27241804659063 0.0 8 4.391282601430943E-5 0.0 0.0 1.6742643174475758 0.0 9 4.391282601430943E-5 0.0 0.0 1.7883059266067374 0.0 10 4.391282601430943E-5 0.0 0.0 2.061268053111685 0.0 11 4.391282601430943E-5 0.0 0.0 2.544484790573146 0.0 12 4.391282601430943E-5 0.0 0.0 2.893460018908863 0.0 13 4.391282601430943E-5 0.0 0.0 3.02304676847709 0.0 14 4.391282601430943E-5 0.0 0.0 3.082109519466336 0.0 15 4.391282601430943E-5 0.0 0.0 3.182582065387076 0.0 16 4.391282601430943E-5 0.0 0.0 3.4002140311139937 0.0 17 4.391282601430943E-5 0.0 0.0 3.6422615281048674 0.0 18 4.391282601430943E-5 0.0 0.0 3.9182975524308166 0.0 19 4.391282601430943E-5 0.0 0.0 4.099877087999986 0.0 20 4.391282601430943E-5 0.0 0.0 4.305389113746954 0.0 21 4.391282601430943E-5 0.0 0.0 4.5718521420017835 0.0 22 4.391282601430943E-5 0.0 0.0 4.845472960896946 0.0 23 4.391282601430943E-5 0.0 0.0 5.105612542205715 0.0 24 4.391282601430943E-5 0.0 0.0 5.308182408609724 0.0 25 4.830410861574038E-4 0.0 0.0 5.488883687658608 0.0 26 4.830410861574038E-4 0.0 0.0 5.6599680578103575 0.0 27 4.830410861574038E-4 0.0 0.0 5.861220539433937 0.0 28 4.830410861574038E-4 0.0 0.0 6.04956265020931 0.0 29 4.830410861574038E-4 0.0 0.0 6.276723699181333 0.0 30 4.830410861574038E-4 0.0 0.0 6.539805439833061 0.0 31 4.830410861574038E-4 0.0 0.0 6.770479514886229 0.0 32 4.830410861574038E-4 0.0 0.0 6.980558474538685 0.0 33 4.830410861574038E-4 0.0 0.0 7.191120475277298 0.0 34 4.830410861574038E-4 0.0 0.0 7.425395402063639 0.0 35 4.830410861574038E-4 0.0 0.0 7.701431426389589 0.0 36 4.830410861574038E-4 0.0 0.0 7.943435010554448 0.0 37 4.830410861574038E-4 0.0 0.0 8.21002977728732 0.0 38 4.830410861574038E-4 0.0 0.0 8.51399435895837 0.0 39 4.830410861574038E-4 0.0 0.0 9.027510946369704 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTTACG 25 3.8920152E-5 45.000004 16 ACCGGAT 25 3.8920152E-5 45.000004 11 ACGTTGC 30 2.1664437E-6 45.000004 45 CGTGACG 25 3.8920152E-5 45.000004 24 GCTATCG 25 3.8920152E-5 45.000004 31 CCAATCG 50 2.1827873E-11 45.000004 24 TATGCGT 25 3.8920152E-5 45.000004 26 CTAACGA 25 3.8920152E-5 45.000004 16 TCGGACA 25 3.8920152E-5 45.000004 12 TATTCGC 60 0.0 45.000004 15 TCTAACG 60 0.0 45.000004 1 GTATCGC 25 3.8920152E-5 45.000004 13 ACGTCGT 25 3.8920152E-5 45.000004 20 AACCTCG 30 2.1664437E-6 45.000004 25 CGTAAAC 25 3.8920152E-5 45.000004 21 CACGTTA 25 3.8920152E-5 45.000004 31 ATACGCG 50 2.1827873E-11 45.000004 1 CCAGTCG 50 2.1827873E-11 45.000004 28 AGGTGCG 50 2.1827873E-11 45.000004 1 CGATAAG 25 3.8920152E-5 45.000004 12 >>END_MODULE