SRR1547569_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547569_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1158476
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5177	0.44688021158832814	No Hit
GGGAATGGTTACATCAGTGCGGCAGAACTGCGCCACGTCATGACAAACTTA	1351	0.1166187301247501	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGCCAC	30	2.165516E-6	45.000004	38
GTCATCG	30	2.165516E-6	45.000004	1
CGGCGTA	30	2.165516E-6	45.000004	35
TTTCGCG	30	2.165516E-6	45.000004	1
ACTAGGT	30	2.165516E-6	45.000004	43
CGGGTTA	20	7.0333114E-4	45.0	6
GTTTCGC	20	7.0333114E-4	45.0	17
CGCATCG	35	1.211938E-7	45.0	21
GGCGTAG	100	0.0	45.0	1
CTAAGCG	45	3.8562575E-10	45.0	1
TCGGATA	25	3.890825E-5	45.0	39
CCATACG	55	1.8189894E-12	45.0	2
GTCGTAC	20	7.0333114E-4	45.0	30
TATAGCG	80	0.0	45.0	1
TTACGAT	20	7.0333114E-4	45.0	10
CCGCGTT	20	7.0333114E-4	45.0	45
CACGTTA	20	7.0333114E-4	45.0	40
CGTCCTA	20	7.0333114E-4	45.0	40
CGATAAT	25	3.890825E-5	45.0	43
GTTGCGC	25	3.890825E-5	45.0	35