##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547569_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1158476 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.543427744726692 31.0 31.0 33.0 30.0 34.0 2 31.97821448178469 31.0 31.0 34.0 30.0 34.0 3 32.135969152576315 33.0 31.0 34.0 30.0 34.0 4 35.842144334453195 37.0 35.0 37.0 35.0 37.0 5 35.762491411129794 37.0 35.0 37.0 35.0 37.0 6 35.803116335599526 37.0 35.0 37.0 35.0 37.0 7 36.08527410149196 37.0 35.0 37.0 35.0 37.0 8 36.038104371605456 37.0 35.0 37.0 35.0 37.0 9 37.70008960047511 39.0 38.0 39.0 35.0 39.0 10 37.330049133516795 39.0 37.0 39.0 34.0 39.0 11 37.13665798859881 39.0 37.0 39.0 33.0 39.0 12 36.81748607653503 39.0 35.0 39.0 33.0 39.0 13 36.708929662763836 39.0 35.0 39.0 33.0 39.0 14 37.74582468691626 40.0 36.0 41.0 33.0 41.0 15 37.962547346686506 40.0 37.0 41.0 33.0 41.0 16 38.025738988118874 40.0 36.0 41.0 33.0 41.0 17 37.98523922808932 40.0 36.0 41.0 33.0 41.0 18 37.88131994102597 40.0 36.0 41.0 33.0 41.0 19 37.895567107130404 40.0 36.0 41.0 33.0 41.0 20 37.80654497805738 40.0 36.0 41.0 33.0 41.0 21 37.660636042524835 40.0 35.0 41.0 33.0 41.0 22 37.61760278158546 39.0 35.0 41.0 33.0 41.0 23 37.53380648369064 39.0 35.0 41.0 33.0 41.0 24 37.48623622759556 39.0 35.0 41.0 32.0 41.0 25 37.43272454500568 39.0 35.0 41.0 32.0 41.0 26 37.47193554290292 39.0 35.0 41.0 33.0 41.0 27 37.447670042366006 39.0 35.0 41.0 33.0 41.0 28 37.418140729717315 39.0 35.0 41.0 33.0 41.0 29 37.371675373507955 39.0 35.0 41.0 32.0 41.0 30 37.271586981517096 39.0 35.0 41.0 32.0 41.0 31 37.14389767245933 39.0 35.0 41.0 32.0 41.0 32 37.061593852613264 39.0 35.0 41.0 31.0 41.0 33 36.97876779493058 39.0 35.0 41.0 31.0 41.0 34 36.889086178738275 39.0 35.0 41.0 31.0 41.0 35 36.80509911297256 39.0 35.0 41.0 31.0 41.0 36 36.75357711337999 39.0 35.0 41.0 31.0 41.0 37 36.718285057264886 39.0 35.0 41.0 31.0 41.0 38 36.607359151160665 39.0 35.0 41.0 30.0 41.0 39 36.53167782500457 39.0 35.0 41.0 30.0 41.0 40 36.462848604545975 39.0 35.0 41.0 30.0 41.0 41 36.38451551866417 39.0 35.0 41.0 30.0 41.0 42 36.38258367027025 39.0 35.0 41.0 30.0 41.0 43 36.36417413912761 39.0 35.0 41.0 30.0 41.0 44 36.2648867995539 39.0 35.0 41.0 30.0 41.0 45 36.207220520753125 39.0 35.0 41.0 30.0 41.0 46 36.19190125647834 39.0 35.0 41.0 30.0 41.0 47 36.12607770899009 39.0 35.0 40.0 30.0 41.0 48 36.04898072985543 38.0 35.0 40.0 29.0 41.0 49 35.98071345457308 38.0 35.0 40.0 29.0 41.0 50 35.86496828592047 38.0 35.0 40.0 29.0 41.0 51 35.427963980263726 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 5.0 11 5.0 12 5.0 13 13.0 14 14.0 15 20.0 16 61.0 17 144.0 18 326.0 19 622.0 20 1055.0 21 1718.0 22 2521.0 23 3940.0 24 5590.0 25 8170.0 26 11201.0 27 13141.0 28 15039.0 29 17488.0 30 21303.0 31 26805.0 32 34511.0 33 45925.0 34 75117.0 35 98731.0 36 83170.0 37 111925.0 38 185718.0 39 394067.0 40 122.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.17789924003605 24.04624696584133 29.840324702453913 12.93552909166871 2 31.594266950718016 25.148816203356823 30.04619862647133 13.210718219453835 3 29.13845431411613 25.766783256623356 31.45054364527189 13.64421878398862 4 26.919504590513743 27.831651238351075 30.77275662163049 14.476087549504694 5 24.169943960858923 31.323134877200737 29.489777949651092 15.01714321228925 6 23.66307113828858 40.18581308546746 25.74692958680197 10.404186189441992 7 88.09979662936479 4.006643210562843 5.944534025737261 1.9490261343351092 8 88.1441652654004 3.4182840214212464 6.191582734558161 2.245967978620187 9 82.36053228551994 7.1752025937524815 7.534467697215998 2.929797423511579 10 35.56008065769166 42.20777987632027 13.091423559918375 9.1407159060697 11 29.64066584029363 23.78866717998474 30.199417165310287 16.37124981441135 12 28.398430351599863 23.002116573843566 30.985104568415743 17.614348506140825 13 26.451130623336176 25.141996899374696 30.231010396417364 18.175862080871767 14 18.417299969960535 30.48401520618468 31.46832562780757 19.63035919604722 15 17.96075188437223 31.750161418967675 33.79836958210615 16.49071711455395 16 23.549042017270967 30.053449531971317 31.189856328486737 15.207652122270984 17 23.8464154630739 29.56306388738308 27.541615018351695 19.048905631191325 18 23.01808583000425 30.2468070119709 29.83462756241821 16.90047959560664 19 23.475151837413982 30.81600309371968 28.26161267043944 17.447232398426898 20 25.612442553837973 31.67074673968213 27.17967398547747 15.53713672100242 21 26.54176694208598 27.11484743749547 30.648196423577183 15.695189196841367 22 24.234166266715924 23.507004029431773 32.94975467769725 19.30907502615505 23 20.59507490875944 27.199786616209572 32.86231221017958 19.34282626485141 24 20.251174819331606 28.16225800102894 33.18204261460747 18.40452456503199 25 21.24144134190091 30.309043950845766 29.333624520490716 19.115890186762606 26 20.088978968921236 33.387312296499886 27.01497484626354 19.508733888315337 27 18.252687151050175 32.50382398944821 31.125806663236872 18.11768219626475 28 17.00984742023141 31.370870005075634 32.65436659887646 18.964915975816503 29 19.68664003397567 28.83909550133106 32.60550930705513 18.86875515763814 30 21.063362555633436 29.095207842026937 31.605574910485846 18.23585469185378 31 22.81834064754039 28.889247597705953 29.79612870702544 18.496283047728223 32 23.237857322896634 29.45870264036545 29.20224501845528 18.101195018282638 33 23.138675294093275 28.51133730867105 28.831930916134645 19.51805648110103 34 20.170896937010347 29.183945114098176 30.207790234756697 20.437367714134776 35 20.56469016190236 29.48882842631181 29.784475466043318 20.162005945742507 36 22.761282926879797 29.262755551258724 29.337854215365706 18.638107306495773 37 20.822615228973238 31.12338969473688 28.674051080902842 19.37994399538704 38 21.22409096088309 30.928996371094435 27.41765906242339 20.42925360559908 39 19.437692278476206 30.212537851453114 29.45585407034759 20.893915799723082 40 22.370856193827063 28.854719476277452 28.70003349227779 20.0743908376177 41 20.118155231528316 28.32341800779645 29.38282709352632 22.17559966714891 42 20.15941633663537 28.744488448616977 29.633242294186502 21.46285292056115 43 20.428390402563366 28.214740745600253 29.43669096295478 21.9201778888816 44 20.63115679565222 28.667490737831425 29.889527275489524 20.81182519102683 45 20.05091171504632 29.651801159454315 28.76287467327765 21.534412452221712 46 21.25939596504373 29.246182052973047 29.412780238865544 20.081641743117682 47 20.385748172599175 29.51576036102604 29.62055320956153 20.47793825681326 48 20.222689119153095 30.272703103042275 29.476570943204695 20.02803683459994 49 21.560222222989513 28.028547850797082 30.746687889951975 19.664542036261434 50 19.759580690493372 29.020022857616386 30.42531739975623 20.79507905213401 51 19.243730556351622 30.303864732631492 29.211999212758833 21.240405498258056 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 842.0 1 1534.0 2 2226.0 3 5686.5 4 9147.0 5 6447.0 6 3747.0 7 3817.5 8 3888.0 9 4036.5 10 4185.0 11 4391.5 12 4598.0 13 4593.0 14 4588.0 15 4516.5 16 4445.0 17 4317.5 18 4190.0 19 4350.0 20 4510.0 21 5739.5 22 6969.0 23 7938.5 24 8908.0 25 11107.0 26 16412.0 27 19518.0 28 22046.0 29 24574.0 30 28162.0 31 31750.0 32 36217.0 33 40684.0 34 46943.0 35 53202.0 36 56900.0 37 60598.0 38 64040.0 39 67482.0 40 71603.5 41 75725.0 42 80179.5 43 84634.0 44 88941.0 45 93248.0 46 93823.0 47 94398.0 48 95096.0 49 95794.0 50 89092.0 51 82390.0 52 74107.0 53 65824.0 54 59815.0 55 53806.0 56 48274.5 57 42743.0 58 38708.5 59 34674.0 60 29628.5 61 24583.0 62 20064.5 63 15546.0 64 12914.0 65 10282.0 66 7913.5 67 5545.0 68 4312.5 69 3080.0 70 2239.5 71 1399.0 72 1109.5 73 820.0 74 572.5 75 227.0 76 129.0 77 114.0 78 99.0 79 74.5 80 50.0 81 27.0 82 4.0 83 5.0 84 6.0 85 5.0 86 4.0 87 3.5 88 3.0 89 2.5 90 2.0 91 2.5 92 3.0 93 3.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1158476.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.351733249071437 #Duplication Level Percentage of deduplicated Percentage of total 1 75.90648230223486 14.689219973882107 2 8.575153412899821 3.3188816283260376 3 2.955323220367099 1.715718798759926 4 1.4833194468650996 1.1481920903557439 5 0.9422171640626417 0.9116767610818408 6 0.6354214402562589 0.7377903727547943 7 0.5164776770720979 0.6996316765059508 8 0.4241086653900275 0.6565790208998006 9 0.36265212210972714 0.6316152416349409 >10 5.162243881258629 25.036810249644358 >50 2.3580432800424274 33.02691145780659 >100 0.6731469630896272 16.193855654791374 >500 0.003606949567794385 0.4726381651068952 >1k 0.0013526060879228943 0.30878096110638775 >5k 4.5086869597429815E-4 0.45169794734325214 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5177 0.44688021158832814 No Hit GGGAATGGTTACATCAGTGCGGCAGAACTGCGCCACGTCATGACAAACTTA 1351 0.1166187301247501 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.059388368857015594 0.0 2 0.0 0.0 0.0 0.212261626481688 0.0 3 0.0 0.0 0.0 0.3007399376422127 0.0 4 0.0 0.0 0.0 0.4194303550526727 0.0 5 0.0 0.0 0.0 0.731737213373432 0.0 6 0.0 0.0 0.0 0.981202890694326 0.0 7 0.0 0.0 0.0 1.1528076541939583 0.0 8 0.0 0.0 0.0 1.53676036447885 0.0 9 0.0 0.0 0.0 1.6565729458357359 0.0 10 0.0 0.0 0.0 1.9407393851922699 0.0 11 0.0 0.0 0.0 2.4724724551911303 0.0 12 0.0 0.0 0.0 2.8144734979403974 0.0 13 0.0 0.0 0.0 2.9636349825115067 0.0 14 0.0 0.0 0.0 3.020520062564956 0.0 15 0.0 0.0 0.0 3.11866624772546 0.0 16 0.0 0.0 0.0 3.326698179332157 0.0 17 0.0 0.0 0.0 3.5773723409030485 0.0 18 0.0 0.0 0.0 3.8365058922239217 0.0 19 0.0 0.0 0.0 4.016052123652108 0.0 20 0.0 0.0 0.0 4.225378859812374 0.0 21 0.0 0.0 0.0 4.460083765222586 0.0 22 0.0 0.0 0.0 4.728885190543438 0.0 23 0.0 0.0 0.0 4.987759780953597 0.0 24 0.0 0.0 0.0 5.182153104596038 0.0 25 0.0 0.0 0.0 5.355656914774237 0.0 26 0.0 0.0 0.0 5.523031983398879 0.0 27 0.0 0.0 0.0 5.72787006377344 0.0 28 0.0 0.0 0.0 5.918896895576602 0.0 29 0.0 0.0 0.0 6.141430638183269 0.0 30 0.0 0.0 0.0 6.381401082111325 0.0 31 0.0 0.0 0.0 6.592540544646587 0.0 32 0.0 0.0 0.0 6.783653696753321 0.0 33 0.0 0.0 0.0 6.996605885663579 0.0 34 0.0 0.0 0.0 7.221297635859526 0.0 35 0.0 0.0 0.0 7.465584094966145 0.0 36 0.0 0.0 0.0 7.688894720304952 0.0 37 0.0 0.0 0.0 7.934648624572283 0.0 38 0.0 0.0 0.0 8.213894806625255 0.0 39 0.0 0.0 0.0 8.665867916124288 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCCAC 30 2.165516E-6 45.000004 38 GTCATCG 30 2.165516E-6 45.000004 1 CGGCGTA 30 2.165516E-6 45.000004 35 TTTCGCG 30 2.165516E-6 45.000004 1 ACTAGGT 30 2.165516E-6 45.000004 43 CGGGTTA 20 7.0333114E-4 45.0 6 GTTTCGC 20 7.0333114E-4 45.0 17 CGCATCG 35 1.211938E-7 45.0 21 GGCGTAG 100 0.0 45.0 1 CTAAGCG 45 3.8562575E-10 45.0 1 TCGGATA 25 3.890825E-5 45.0 39 CCATACG 55 1.8189894E-12 45.0 2 GTCGTAC 20 7.0333114E-4 45.0 30 TATAGCG 80 0.0 45.0 1 TTACGAT 20 7.0333114E-4 45.0 10 CCGCGTT 20 7.0333114E-4 45.0 45 CACGTTA 20 7.0333114E-4 45.0 40 CGTCCTA 20 7.0333114E-4 45.0 40 CGATAAT 25 3.890825E-5 45.0 43 GTTGCGC 25 3.890825E-5 45.0 35 >>END_MODULE