##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547567_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1885982 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.358318902301296 31.0 31.0 33.0 30.0 34.0 2 31.766867340197308 31.0 31.0 34.0 30.0 34.0 3 31.8902889847305 31.0 31.0 34.0 30.0 34.0 4 35.64496214704064 37.0 35.0 37.0 33.0 37.0 5 35.54485938890191 37.0 35.0 37.0 33.0 37.0 6 35.58897062644288 37.0 35.0 37.0 33.0 37.0 7 35.98109048760805 37.0 35.0 37.0 35.0 37.0 8 35.94248513506491 37.0 35.0 37.0 35.0 37.0 9 37.611257689628005 39.0 37.0 39.0 35.0 39.0 10 37.13456491101188 39.0 37.0 39.0 33.0 39.0 11 36.79257861421795 39.0 37.0 39.0 32.0 39.0 12 36.51597417154564 39.0 35.0 39.0 32.0 39.0 13 36.43999465530424 39.0 35.0 39.0 32.0 39.0 14 37.523747310419715 40.0 36.0 41.0 32.0 41.0 15 37.72705306837499 40.0 36.0 41.0 33.0 41.0 16 37.77815270771407 40.0 36.0 41.0 33.0 41.0 17 37.706301014537786 40.0 36.0 41.0 33.0 41.0 18 37.62898479412847 39.0 36.0 41.0 33.0 41.0 19 37.606973449375445 39.0 36.0 41.0 32.0 41.0 20 37.493117113524946 39.0 35.0 41.0 32.0 41.0 21 37.36561377574123 39.0 35.0 41.0 32.0 41.0 22 37.27372689665119 39.0 35.0 41.0 32.0 41.0 23 37.18173238132707 39.0 35.0 41.0 32.0 41.0 24 37.12676367006684 39.0 35.0 41.0 32.0 41.0 25 37.06682089224606 39.0 35.0 41.0 32.0 41.0 26 37.05905252542177 39.0 35.0 41.0 32.0 41.0 27 37.00661353077601 39.0 35.0 41.0 31.0 41.0 28 36.950842584923926 39.0 35.0 41.0 31.0 41.0 29 36.919497641016726 39.0 35.0 41.0 31.0 41.0 30 36.80949075866047 39.0 35.0 41.0 31.0 41.0 31 36.69945524400551 39.0 35.0 41.0 31.0 41.0 32 36.563294347454004 39.0 35.0 41.0 30.0 41.0 33 36.43918976957362 39.0 35.0 41.0 30.0 41.0 34 36.37404863885233 39.0 35.0 41.0 30.0 41.0 35 36.266302647639264 39.0 35.0 41.0 30.0 41.0 36 36.193769611799055 39.0 35.0 41.0 30.0 41.0 37 36.16421471678945 39.0 35.0 41.0 30.0 41.0 38 36.06536064501146 38.0 35.0 41.0 30.0 41.0 39 36.0124937565682 38.0 35.0 41.0 29.0 41.0 40 35.965184185214916 38.0 35.0 41.0 29.0 41.0 41 35.90726210536474 38.0 35.0 41.0 29.0 41.0 42 35.867891634172544 38.0 35.0 40.0 29.0 41.0 43 35.818179600865754 38.0 35.0 40.0 29.0 41.0 44 35.71891195143962 38.0 35.0 40.0 28.0 41.0 45 35.65868603199819 38.0 35.0 40.0 28.0 41.0 46 35.5955194694329 38.0 35.0 40.0 28.0 41.0 47 35.531805711825456 38.0 34.0 40.0 27.0 41.0 48 35.4345094491888 38.0 34.0 40.0 27.0 41.0 49 35.375601675943884 38.0 34.0 40.0 27.0 41.0 50 35.28697304640235 38.0 34.0 40.0 27.0 41.0 51 34.842671881279884 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 0.0 10 0.0 11 2.0 12 3.0 13 8.0 14 19.0 15 31.0 16 104.0 17 248.0 18 553.0 19 1056.0 20 1921.0 21 3091.0 22 5040.0 23 7702.0 24 11506.0 25 17134.0 26 22540.0 27 26741.0 28 29898.0 29 34406.0 30 41494.0 31 51401.0 32 64025.0 33 82255.0 34 129986.0 35 181317.0 36 147194.0 37 181545.0 38 279747.0 39 564836.0 40 177.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.46489096926694 23.911999160119237 30.141273882783608 13.481835987830213 2 29.926531642401677 25.703426649883195 31.042555019082897 13.327486688632234 3 27.533984947894517 25.898232326713615 32.961661352017146 13.60612137337472 4 26.450570578086115 27.780063648539592 31.7120205813205 14.057345192053795 5 23.1608785237611 31.47935664285237 30.875162117135798 14.484602716250738 6 22.121154920884717 40.10748777029685 27.23472440352029 10.536632905298141 7 87.89102971290288 3.0274944299574438 7.146197577707529 1.9352782794321473 8 87.93392513820386 2.772348834718465 6.953247698016206 2.3404783290614652 9 82.9285221173903 5.583722432133499 8.545998848345318 2.941756602130879 10 41.82420616951805 36.20909425434601 13.275842505389765 8.690857070746167 11 26.351046828654777 25.8907561153818 30.372400160765057 17.385796895198364 12 26.73615124640638 24.452089150373652 30.466780700982298 18.344978902237667 13 24.052403469386242 27.41362324772983 30.294668772024337 18.239304510859593 14 16.23011248251574 32.36091330670176 31.178399369665243 20.230574841117253 15 16.195117450749798 32.34574879293652 34.799271679157066 16.659862077156625 16 20.450460290713274 30.695096771867387 32.955245596193386 15.899197341225952 17 20.310480163649494 30.491860473747895 28.621906253612178 20.575753108990437 18 20.342718011094483 31.228081710217808 30.94584147674792 17.483358801939787 19 21.99973276521197 32.27565268385382 28.00026723478803 17.724347316146176 20 23.719208348754123 31.80767366814742 28.19979193862932 16.27332604446914 21 23.3516544696609 29.63978447302254 30.864769653156817 16.143791404159742 22 22.54820035398005 25.417792958787516 31.021080795044703 21.01292589218773 23 18.21655774021173 29.326631961492737 32.28493166954934 20.171878628746192 24 18.520961493800048 29.714917745768517 33.61018291797058 18.153937842460852 25 19.1175207398586 31.538530060202056 30.02838839395074 19.315560805988603 26 18.955483138227194 34.88363091482316 27.38175655971266 18.779129387236992 27 18.03034175299658 34.520477926088375 30.46821231591818 16.980968004996868 28 17.36273198789808 31.871884249160388 32.593630267945294 18.17175349499624 29 17.87901475199657 29.196620116204713 33.1912499695119 19.73311516228681 30 19.8787687263187 30.523515070663453 30.70320925650404 18.894506946513808 31 21.985469638628576 30.11826199825873 28.932248558045625 18.964019805067068 32 22.74438462297095 30.863285015445534 28.34899802861321 18.043332332970305 33 21.194422852392016 30.41545465439225 28.926628143852913 19.463494349362826 34 19.699392677130533 29.62366554930005 29.401765234238713 21.275176539330705 35 19.486506233887706 30.33941999446442 29.20441446418895 20.969659307458926 36 21.06382775657456 30.788310811025767 29.040574088193843 19.10728734420583 37 19.154530637089856 31.837896650127096 30.105642577712832 18.90193013507022 38 18.549169610314415 33.030484914490174 28.350482666324496 20.069862808870923 39 18.880986138786053 31.662603354644954 28.78998845163952 20.666422054929473 40 20.312495029114803 29.416081383597508 29.730718532838594 20.540705054449088 41 18.50966764263922 29.001867462149693 30.00627789660771 22.482186998603378 42 20.196958401511786 29.03230253523098 29.245188978473813 21.52555008478342 43 20.838268870010424 29.456855897882377 28.61082449355296 21.094050738554238 44 19.416357102029604 30.48963351718097 28.76612820270819 21.32788117808123 45 19.339261986593723 31.68025993885413 28.101275621930643 20.8792024526215 46 21.020720240171965 30.536823787289592 28.215221566271577 20.227234406266867 47 19.76317907594028 29.88178041996159 28.992164294250955 21.36287620984718 48 19.103416681601416 29.742807725630467 30.61487331268273 20.538902280085388 49 20.59940126682015 29.15229307596785 30.096575683118925 20.151729974093072 50 19.26847658143079 29.53538262825414 30.70161857324195 20.494522217073122 51 18.18490314329617 30.46895463477382 29.177531917059653 22.168610304870352 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1366.0 1 2027.0 2 2688.0 3 12740.5 4 22793.0 5 15206.5 6 7620.0 7 7995.0 8 8370.0 9 9617.0 10 10864.0 11 12233.5 12 13603.0 13 13728.5 14 13854.0 15 13333.5 16 12813.0 17 11805.5 18 10798.0 19 10326.0 20 9854.0 21 10857.5 22 11861.0 23 13621.5 24 15382.0 25 17819.0 26 23131.0 27 26006.0 28 33998.5 29 41991.0 30 47023.5 31 52056.0 32 58192.0 33 64328.0 34 69292.0 35 74256.0 36 81448.0 37 88640.0 38 94109.5 39 99579.0 40 113045.0 41 126511.0 42 137413.0 43 148315.0 44 152817.5 45 157320.0 46 162101.0 47 166882.0 48 173812.0 49 180742.0 50 162397.0 51 144052.0 52 124104.5 53 104157.0 54 88857.5 55 73558.0 56 66406.0 57 59254.0 58 52412.0 59 45570.0 60 38402.0 61 31234.0 62 24995.0 63 18756.0 64 14609.5 65 10463.0 66 7533.0 67 4603.0 68 3660.5 69 2718.0 70 2047.0 71 1376.0 72 1075.0 73 774.0 74 604.0 75 278.5 76 123.0 77 94.5 78 66.0 79 61.5 80 57.0 81 39.0 82 21.0 83 13.5 84 6.0 85 3.5 86 1.0 87 2.5 88 4.0 89 3.5 90 3.0 91 2.5 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1885982.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.799457240698892 #Duplication Level Percentage of deduplicated Percentage of total 1 75.28035044413764 15.65790430127669 2 10.072493258217467 4.190047856630441 3 3.9866980518215342 2.487634669813187 4 2.055600472054425 1.7102149648982587 5 1.2219193799224224 1.2707629947138865 6 0.7882004479294568 0.983648490828507 7 0.5669066673718005 0.8253945691226813 8 0.4248953466035132 0.7070074074761368 9 0.31857062469115527 0.5963486477765777 >10 3.0689448427783055 14.481412613752195 >50 1.0233820538235825 15.507572568257908 >100 1.1855907775360721 39.42206559432236 >500 0.0036106745430850877 0.5385211503212666 >1k 0.002579053245060777 0.7217116800898815 >5k 0.0 0.0 >10k+ 2.579053245060777E-4 0.8997524907200523 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16773 0.889351011833623 No Hit CTGTCTCTTATACACATCTGACGCGTGACCTATCGTATGCCGTCTTCTGCT 2145 0.11373385323932043 TruSeq Adapter, Index 13 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0604555080589317E-4 0.0 0.0 0.124073294442895 0.0 2 1.0604555080589317E-4 0.0 0.0 0.37725704699196494 0.0 3 1.0604555080589317E-4 0.0 0.0 0.5741836348385085 0.0 4 1.0604555080589317E-4 0.0 0.0 0.8386082157730032 0.0 5 1.0604555080589317E-4 0.0 0.0 1.534638188487483 0.0 6 1.0604555080589317E-4 0.0 0.0 2.2339025505015426 0.0 7 1.0604555080589317E-4 0.0 0.0 2.744405832081112 0.0 8 1.0604555080589317E-4 0.0 0.0 3.6910214413499176 0.0 9 1.0604555080589317E-4 0.0 0.0 4.02379237977881 0.0 10 1.0604555080589317E-4 0.0 0.0 4.56038286685663 0.0 11 1.0604555080589317E-4 0.0 0.0 5.384621910495434 0.0 12 1.0604555080589317E-4 0.0 0.0 5.998731695212362 0.0 13 1.0604555080589317E-4 0.0 0.0 6.228638449359538 0.0 14 1.0604555080589317E-4 0.0 0.0 6.323549217330812 0.0 15 1.0604555080589317E-4 0.0 0.0 6.4649079365550675 0.0 16 1.0604555080589317E-4 0.0 0.0 6.769099599041772 0.0 17 1.0604555080589317E-4 0.0 0.0 7.173239193163031 0.0 18 1.0604555080589317E-4 0.0 0.0 7.5700086215032805 0.0 19 1.0604555080589317E-4 0.0 0.0 7.858770656347728 0.0 20 1.0604555080589317E-4 0.0 0.0 8.144298301892595 0.0 21 1.0604555080589317E-4 0.0 0.0 8.499869033744755 0.0 22 1.0604555080589317E-4 0.0 0.0 8.88179208497218 0.0 23 1.0604555080589317E-4 0.0 0.0 9.277554080579772 0.0 24 1.0604555080589317E-4 0.0 0.0 9.564460318285116 0.0 25 1.0604555080589317E-4 0.0 0.0 9.817325934181769 0.0 26 1.0604555080589317E-4 0.0 0.0 10.050042895425301 0.0 27 1.0604555080589317E-4 0.0 0.0 10.286047268743816 0.0 28 1.0604555080589317E-4 0.0 0.0 10.537375224153783 0.0 29 1.0604555080589317E-4 0.0 0.0 10.814366202858777 0.0 30 1.0604555080589317E-4 0.0 0.0 11.14215300039979 0.0 31 1.0604555080589317E-4 0.0 0.0 11.435368948378086 0.0 32 1.0604555080589317E-4 0.0 0.0 11.698998187681537 0.0 33 1.0604555080589317E-4 0.0 0.0 11.958226536626542 0.0 34 1.0604555080589317E-4 0.0 0.0 12.236755175818221 0.0 35 1.0604555080589317E-4 0.0 0.0 12.544499364256923 0.0 36 1.0604555080589317E-4 0.0 0.0 12.822921957897796 0.0 37 1.0604555080589317E-4 0.0 0.0 13.115554655346658 0.0 38 1.0604555080589317E-4 0.0 0.0 13.41126267376889 0.0 39 1.0604555080589317E-4 0.0 0.0 13.771605455407316 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCGAG 45 3.8562575E-10 45.000004 1 ACGACGT 45 3.8562575E-10 45.000004 15 ACCGGTG 25 3.89176E-5 45.0 14 CGACGTG 25 3.89176E-5 45.0 16 GCGCGGT 25 3.89176E-5 45.0 29 CCGGCCC 25 3.89176E-5 45.0 40 TAACGCC 55 1.8189894E-12 45.0 12 CGTTCCG 20 7.0344395E-4 45.0 28 TCTAGCG 55 1.8189894E-12 45.0 1 CCCCGTA 20 7.0344395E-4 45.0 18 CTACGCG 35 1.2124838E-7 45.0 1 ATCCCGG 20 7.0344395E-4 45.0 27 GTCGTAC 25 3.89176E-5 45.0 44 TTAACGC 35 1.2124838E-7 45.0 21 TCCCGGT 20 7.0344395E-4 45.0 28 ATGCGAT 25 3.89176E-5 45.0 1 ACCGTAG 25 3.89176E-5 45.0 36 CGATATC 40 6.8193913E-9 45.0 10 ATCGCTT 25 3.89176E-5 45.0 25 CGCCCGA 20 7.0344395E-4 45.0 33 >>END_MODULE