##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547566_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1418661 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.436095726886126 31.0 31.0 33.0 30.0 34.0 2 31.860008839321022 31.0 31.0 34.0 30.0 34.0 3 32.0243031985795 33.0 31.0 34.0 30.0 34.0 4 35.750257461084786 37.0 35.0 37.0 35.0 37.0 5 35.65564994033106 37.0 35.0 37.0 33.0 37.0 6 35.70430497490239 37.0 35.0 37.0 33.0 37.0 7 35.96366855788663 37.0 35.0 37.0 35.0 37.0 8 35.88816073748415 37.0 35.0 37.0 35.0 37.0 9 37.52721545175345 39.0 37.0 39.0 35.0 39.0 10 37.18558415294422 39.0 37.0 39.0 33.0 39.0 11 36.95598525652006 39.0 37.0 39.0 33.0 39.0 12 36.458564096708095 39.0 35.0 39.0 32.0 39.0 13 36.24738750131286 39.0 35.0 39.0 32.0 39.0 14 37.16105256999382 39.0 35.0 41.0 31.0 41.0 15 37.44221487726807 40.0 35.0 41.0 32.0 41.0 16 37.55369817031694 40.0 35.0 41.0 33.0 41.0 17 37.50171464500681 39.0 35.0 41.0 33.0 41.0 18 37.457739375368746 39.0 36.0 41.0 32.0 41.0 19 37.45895390089669 39.0 35.0 41.0 32.0 41.0 20 37.33885473696676 39.0 35.0 41.0 32.0 41.0 21 37.19769839306219 39.0 35.0 41.0 32.0 41.0 22 37.1693188154182 39.0 35.0 41.0 32.0 41.0 23 37.10118062031733 39.0 35.0 41.0 32.0 41.0 24 37.022943465704635 39.0 35.0 41.0 32.0 41.0 25 36.882121239676 39.0 35.0 41.0 31.0 41.0 26 36.927702248810675 39.0 35.0 41.0 32.0 41.0 27 36.94467529593046 39.0 35.0 41.0 32.0 41.0 28 36.91952975376076 39.0 35.0 41.0 31.0 41.0 29 36.89503834954228 39.0 35.0 41.0 31.0 41.0 30 36.81605683105407 39.0 35.0 41.0 31.0 41.0 31 36.655314412675054 39.0 35.0 41.0 31.0 41.0 32 36.56762820716154 39.0 35.0 41.0 31.0 41.0 33 36.48240136297537 39.0 35.0 41.0 30.0 41.0 34 36.41563347409987 39.0 35.0 41.0 30.0 41.0 35 36.329168138124615 39.0 35.0 41.0 30.0 41.0 36 36.248659122933525 39.0 35.0 41.0 30.0 41.0 37 36.21898466229776 39.0 35.0 41.0 30.0 41.0 38 36.0962837492537 38.0 35.0 41.0 30.0 41.0 39 36.041805618114545 38.0 35.0 41.0 29.0 41.0 40 35.97025927970107 38.0 35.0 41.0 29.0 41.0 41 35.897051515478324 38.0 35.0 40.0 29.0 41.0 42 35.90188071709873 38.0 35.0 40.0 29.0 41.0 43 35.882311559985084 38.0 35.0 40.0 29.0 41.0 44 35.78371577142108 38.0 35.0 40.0 29.0 41.0 45 35.73968270080026 38.0 35.0 40.0 29.0 41.0 46 35.70389472890282 38.0 35.0 40.0 29.0 41.0 47 35.6622470061558 38.0 35.0 40.0 29.0 41.0 48 35.57697363922741 38.0 34.0 40.0 29.0 41.0 49 35.51535990627782 38.0 34.0 40.0 28.0 41.0 50 35.428196729169265 38.0 34.0 40.0 28.0 41.0 51 34.99475702792986 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 9.0 11 12.0 12 12.0 13 12.0 14 14.0 15 44.0 16 93.0 17 235.0 18 459.0 19 910.0 20 1571.0 21 2466.0 22 3798.0 23 5791.0 24 8361.0 25 11976.0 26 15995.0 27 18999.0 28 21699.0 29 25019.0 30 30654.0 31 37991.0 32 48185.0 33 63283.0 34 109284.0 35 150367.0 36 97668.0 37 131111.0 38 211222.0 39 421275.0 40 140.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.526528183970655 24.44452903124848 27.60892137022164 12.420021414559223 2 32.51580187232891 24.814525809901024 28.140267477572163 14.529404840197904 3 30.814408798155448 25.357150157789633 29.832356003301708 13.996085040753217 4 28.57821565546667 27.227787329037735 28.4683232992237 15.725673716271892 5 24.775192946024454 31.8503856805819 27.931620027617594 15.442801345776052 6 22.899903500554398 39.889586025132154 25.857410614657063 11.353099859656394 7 86.31159945892641 4.25443428697906 6.788654935886727 2.645311318207803 8 85.6929174764091 4.631057031947731 6.827000953716215 2.8490245379269608 9 80.26653301951629 7.039102364835574 8.658375750091107 4.035988865557029 10 40.572483489713186 34.617149551584205 14.748837107667018 10.061529851035589 11 33.592662376705924 24.11675516561039 26.10235990134359 16.188222556340097 12 33.15450273180133 22.548868263806504 28.107560580011715 16.189068424380455 13 26.5208531143099 27.90871110152461 27.281006526576824 18.28942925758867 14 18.388607285320454 32.554993758198755 29.520371674416936 19.536027282063863 15 17.785009949522827 29.717106482803153 36.252917363626686 16.244966204047337 16 23.39198723303171 26.672052026523602 33.92170504440455 16.014255696040138 17 23.590272799491917 26.686079338192847 27.08892399241256 22.634723869902675 18 23.168537092370904 28.43385417657918 29.701457924056555 18.696150806993355 19 26.69052014540472 29.27041766849163 25.74180864914169 18.297253536961968 20 27.99463719662414 29.33103821138383 26.849261380978263 15.825063211013765 21 25.90090232973205 26.98481173444537 30.36574629174976 16.748539644072828 22 23.8942213819933 23.537969958996545 31.303250036478058 21.264558622532093 23 22.287142594319572 26.901423243466905 30.415300061113964 20.39613410109956 24 20.518432521934415 28.171000683038443 32.85591131355553 18.45465548147161 25 21.418647583883676 28.414328722647625 30.136304585803092 20.03071910766561 26 19.90123080848772 32.91434669734348 26.78349514084055 20.400927353328242 27 18.43534149455014 33.292802156399596 30.25444415543953 18.017412193610735 28 17.202065891710564 29.12859379372521 34.14374540499809 19.52559490956613 29 19.160250405135546 28.510828168251614 33.12912669059063 19.19979473602221 30 22.028236484967163 29.23834517196145 30.241756134834187 18.4916622082372 31 24.726837489717415 27.727483873878256 27.903706382285833 19.641972254118496 32 26.21443741669081 28.699104296234268 27.368624357757064 17.717833929317855 33 25.194461538027763 27.89278058676456 27.009341907615703 19.903415967591975 34 20.374212021053655 28.193134230094437 30.160552802959973 21.272100945891935 35 20.81646002815331 29.254064219711406 29.070299387943983 20.859176364191303 36 25.000616778779428 27.711059936094667 28.352227910684796 18.936095374441113 37 21.27541392905 30.91111971076952 28.405799553240698 19.407666806939783 38 20.802221249473977 31.31234311791189 27.1115509624921 20.773884670122037 39 20.148858677302048 29.92554246574763 28.975209722407257 20.950389134543066 40 23.670277818308953 27.865360364456343 27.31843618736259 21.14592562987211 41 18.769952793514445 27.506712315345244 29.50141013251228 24.22192475862803 42 20.40135028734842 26.433235283129658 29.129369172762203 24.03604525675972 43 21.029407307313022 27.197406568588267 28.30944108564343 23.463745038455276 44 20.15957300581323 28.749715400648924 29.05613109826801 22.034580495269836 45 19.74044539181665 31.24051482348496 26.579077031087767 22.439962753610622 46 20.87447247792108 30.72298456079359 27.808264271732284 20.594278689553036 47 20.089295469460286 29.220440965107237 29.330121854340113 21.36014171109236 48 20.493338436737176 28.76973427760402 30.071313724702375 20.665613560956423 49 21.752694970821075 26.780816558712754 30.37371154912978 21.092776921336387 50 19.350782181225817 29.417457729506907 29.780687563836604 21.45107252543067 51 18.364077112150117 30.84013728438295 28.64017548942277 22.15561011404416 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1108.0 1 2041.0 2 2974.0 3 5900.5 4 8827.0 5 6525.5 6 4224.0 7 4305.0 8 4386.0 9 4616.0 10 4846.0 11 4755.5 12 4665.0 13 4709.0 14 4753.0 15 4546.5 16 4340.0 17 4374.5 18 4409.0 19 4750.0 20 5091.0 21 6009.5 22 6928.0 23 8102.5 24 9277.0 25 11159.5 26 17228.0 27 21414.0 28 22745.5 29 24077.0 30 28595.0 31 33113.0 32 38558.5 33 44004.0 34 46149.5 35 48295.0 36 54998.5 37 61702.0 38 67036.0 39 72370.0 40 85766.5 41 99163.0 42 102032.5 43 104902.0 44 112449.0 45 119996.0 46 118746.5 47 117497.0 48 115673.5 49 113850.0 50 106553.0 51 99256.0 52 94871.5 53 90487.0 54 81580.5 55 72674.0 56 65355.0 57 58036.0 58 56317.5 59 54599.0 60 46570.0 61 38541.0 62 33186.5 63 27832.0 64 22097.0 65 16362.0 66 13211.0 67 10060.0 68 7633.0 69 5206.0 70 4205.5 71 3205.0 72 2352.0 73 1499.0 74 1135.5 75 699.5 76 627.0 77 399.0 78 171.0 79 100.0 80 29.0 81 27.0 82 25.0 83 16.5 84 8.0 85 8.0 86 8.0 87 5.5 88 3.0 89 4.0 90 5.0 91 3.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1418661.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.727547211828954 #Duplication Level Percentage of deduplicated Percentage of total 1 78.62221726565157 12.365346339442087 2 8.469310414270678 2.6640295878415348 3 2.7650306140101786 1.3046144857199247 4 1.4209147757028953 0.8939001687541054 5 0.8456036001658082 0.6649635272050142 6 0.5374564175735985 0.5071722709013536 7 0.4470880850410138 0.492211927573012 8 0.3602721876205374 0.4532958271928721 9 0.30036405710700304 0.4251590899998191 >10 2.927913257085175 10.838342184100044 >50 1.3238893414706911 15.229096774599778 >100 1.973592569650003 52.999213428883266 >500 0.004080480846967614 0.425843115845764 >1k 0.002266933803870897 0.73681127194144 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4646 0.327491909624639 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 1642 0.11574294352209584 No Hit GGGAATGGTTACATCAGTGCGGCAGAACTGCGCCACGTCATGACAAACTTA 1530 0.10784817514543643 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1427 0.1005878077990443 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.409780067260607E-4 0.0 0.0 0.045817852185969725 0.0 2 1.409780067260607E-4 0.0 0.0 0.13886333662516978 0.0 3 1.409780067260607E-4 0.0 0.0 0.19469062728868983 0.0 4 1.409780067260607E-4 0.0 0.0 0.29527843508773416 0.0 5 1.409780067260607E-4 0.0 0.0 0.5020931709548652 0.0 6 1.409780067260607E-4 0.0 0.0 0.6677423288579865 0.0 7 1.409780067260607E-4 0.0 0.0 0.7771412620774096 0.0 8 1.409780067260607E-4 0.0 0.0 1.031254119201134 0.0 9 1.409780067260607E-4 0.0 0.0 1.1013906775473492 0.0 10 1.409780067260607E-4 0.0 0.0 1.273101889739691 0.0 11 1.409780067260607E-4 0.0 0.0 1.5695081488812337 0.0 12 1.409780067260607E-4 0.0 0.0 1.8004301238985212 0.0 13 1.409780067260607E-4 0.0 0.0 1.8841005708904381 0.0 14 1.409780067260607E-4 0.0 0.0 1.9245612588208176 0.0 15 1.409780067260607E-4 0.0 0.0 1.9931470590930462 0.0 16 1.409780067260607E-4 0.0 0.0 2.139200274061245 0.0 17 1.409780067260607E-4 0.0 0.0 2.3092902391762373 0.0 18 1.409780067260607E-4 0.0 0.0 2.48938964276878 0.0 19 1.409780067260607E-4 0.0 0.0 2.6159174038054194 0.0 20 1.409780067260607E-4 0.0 0.0 2.7560495424911235 0.0 21 1.409780067260607E-4 0.0 0.0 2.9273378206632876 0.0 22 1.409780067260607E-4 0.0 0.0 3.114979547615674 0.0 23 1.409780067260607E-4 0.0 0.0 3.2938101491476823 0.0 24 1.409780067260607E-4 0.0 0.0 3.42703436550381 0.0 25 1.409780067260607E-4 0.0 0.0 3.548980341321852 0.0 26 1.409780067260607E-4 0.0 0.0 3.674450767308046 0.0 27 1.409780067260607E-4 0.0 0.0 3.834037870921947 0.0 28 1.409780067260607E-4 0.0 0.0 3.9771305477488985 0.0 29 2.1146701008909106E-4 0.0 0.0 4.159556088452421 0.0 30 2.1146701008909106E-4 0.0 0.0 4.371375543558327 0.0 31 2.819560134521214E-4 0.0 0.0 4.563246610712496 0.0 32 2.819560134521214E-4 0.0 0.0 4.724102516386931 0.0 33 2.819560134521214E-4 0.0 0.0 4.8836896200008315 0.0 34 2.819560134521214E-4 0.0 0.0 5.082468609484577 0.0 35 2.819560134521214E-4 0.0 0.0 5.2893538343550714 0.0 36 2.819560134521214E-4 0.0 0.0 5.4679024798736275 0.0 37 2.819560134521214E-4 0.0 0.0 5.676549929828197 0.0 38 2.819560134521214E-4 0.0 0.0 5.9252351336929685 0.0 39 2.819560134521214E-4 0.0 0.0 6.477445986038948 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCCTA 30 2.1658634E-6 45.000004 23 AGCCGTA 35 1.2121927E-7 45.000004 32 TCGTTGA 25 3.8912687E-5 45.000004 24 TCGTTAA 35 1.2121927E-7 45.000004 11 CTCGTTA 25 3.8912687E-5 45.000004 11 GTCGACG 35 1.2121927E-7 45.000004 24 CACGGCG 25 3.8912687E-5 45.000004 17 CGTGCCG 25 3.8912687E-5 45.000004 29 TTTCGCG 30 2.1658634E-6 45.000004 1 CGTTGTA 25 3.8912687E-5 45.000004 33 ATATGCG 30 2.1658634E-6 45.000004 1 TAACGAC 25 3.8912687E-5 45.000004 37 CCTCGGT 25 3.8912687E-5 45.000004 21 ACGGGTC 70 0.0 45.000004 5 AATGCGC 30 2.1658634E-6 45.000004 37 ATATCGT 30 2.1658634E-6 45.000004 18 ACGATAC 25 3.8912687E-5 45.000004 26 TGACCGG 70 0.0 45.000004 2 TATCTCG 25 3.8912687E-5 45.000004 1 CGCTATA 35 1.2121927E-7 45.000004 42 >>END_MODULE