##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547565_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2436356 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.39085790418149 31.0 31.0 33.0 30.0 34.0 2 31.809982202929294 31.0 31.0 34.0 30.0 34.0 3 31.94173060094666 31.0 31.0 34.0 30.0 34.0 4 35.673108938102644 37.0 35.0 37.0 33.0 37.0 5 35.57528415387571 37.0 35.0 37.0 33.0 37.0 6 35.626878830515736 37.0 35.0 37.0 33.0 37.0 7 36.01115107972726 37.0 35.0 37.0 35.0 37.0 8 35.980898932668296 37.0 35.0 37.0 35.0 37.0 9 37.67215956945537 39.0 38.0 39.0 35.0 39.0 10 37.15772448689764 39.0 37.0 39.0 33.0 39.0 11 36.8606632199892 39.0 37.0 39.0 32.0 39.0 12 36.487859327618786 39.0 35.0 39.0 32.0 39.0 13 36.335467805197595 39.0 35.0 39.0 32.0 39.0 14 37.20950632830342 40.0 36.0 41.0 31.0 41.0 15 37.482972110808106 40.0 36.0 41.0 32.0 41.0 16 37.59617970444385 40.0 35.0 41.0 32.0 41.0 17 37.57189261339476 40.0 35.0 41.0 32.0 41.0 18 37.50383482545244 39.0 36.0 41.0 32.0 41.0 19 37.49971145431948 39.0 36.0 41.0 32.0 41.0 20 37.35516484454653 39.0 35.0 41.0 32.0 41.0 21 37.21636041695056 39.0 35.0 41.0 32.0 41.0 22 37.19892002646576 39.0 35.0 41.0 32.0 41.0 23 37.14836871130492 39.0 35.0 41.0 32.0 41.0 24 37.08185667447614 39.0 35.0 41.0 32.0 41.0 25 37.00273810559705 39.0 35.0 41.0 32.0 41.0 26 37.029208785579776 39.0 35.0 41.0 32.0 41.0 27 37.02389593310666 39.0 35.0 41.0 32.0 41.0 28 36.97310409480388 39.0 35.0 41.0 31.0 41.0 29 36.94006581960929 39.0 35.0 41.0 31.0 41.0 30 36.84958437929432 39.0 35.0 41.0 31.0 41.0 31 36.68936969802443 39.0 35.0 41.0 31.0 41.0 32 36.6001446422444 39.0 35.0 41.0 30.0 41.0 33 36.49392576454344 39.0 35.0 41.0 30.0 41.0 34 36.38731819159433 39.0 35.0 41.0 30.0 41.0 35 36.30584323473253 39.0 35.0 41.0 30.0 41.0 36 36.23920395869897 39.0 35.0 41.0 30.0 41.0 37 36.20905072986049 39.0 35.0 41.0 30.0 41.0 38 36.070769214351266 38.0 35.0 41.0 29.0 41.0 39 36.01776669747771 38.0 35.0 41.0 29.0 41.0 40 35.93375516550127 38.0 35.0 41.0 29.0 41.0 41 35.864358492765426 38.0 35.0 41.0 29.0 41.0 42 35.87454789037398 38.0 35.0 40.0 29.0 41.0 43 35.86954451648281 38.0 35.0 40.0 29.0 41.0 44 35.77439873319006 38.0 35.0 40.0 29.0 41.0 45 35.71123924418271 38.0 35.0 40.0 28.0 41.0 46 35.695381545225736 38.0 35.0 40.0 29.0 41.0 47 35.63219742927552 38.0 34.0 40.0 28.0 41.0 48 35.544660960877636 38.0 34.0 40.0 28.0 41.0 49 35.48954627320474 38.0 34.0 40.0 28.0 41.0 50 35.38783946188488 38.0 34.0 40.0 28.0 41.0 51 34.98344289586579 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 1.0 10 1.0 11 7.0 12 7.0 13 8.0 14 20.0 15 58.0 16 137.0 17 367.0 18 707.0 19 1462.0 20 2576.0 21 4230.0 22 6391.0 23 9868.0 24 14649.0 25 21307.0 26 28320.0 27 33657.0 28 38077.0 29 43941.0 30 53435.0 31 67241.0 32 84020.0 33 110273.0 34 178026.0 35 234058.0 36 178402.0 37 232957.0 38 361973.0 39 729933.0 40 245.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.06085481760465 24.4949834917393 31.50795696523825 12.936204725417797 2 29.87022422010576 26.151432713445814 31.086343703465342 12.891999362983078 3 28.90230327587594 25.2647396357511 32.73392722574205 13.099029862630912 4 26.233974016933487 27.56062742883224 31.8603274726682 14.345071081566077 5 23.269628904807014 31.999100295687494 30.456222325472957 14.27504847403253 6 21.720881513210713 40.97664709098342 26.933009790030688 10.369461605775182 7 89.86502793516219 3.0217258889915923 5.818238385523298 1.295007790322925 8 90.84210189315519 2.0894729670048218 5.4923828865732265 1.576042253266764 9 85.94285892537872 4.875272743392181 6.9056000026268745 2.276268328602224 10 40.649847559223694 37.358251421385056 12.933085312655457 9.058815706735796 11 29.04304625432408 24.777167212016636 28.773463319810404 17.40632321384888 12 30.386856436415698 22.246625698379056 29.44885722776146 17.917660637443788 13 26.054361513670415 26.104272117867833 29.80685088714457 18.034515481317182 14 17.356740968889603 30.878861709865063 31.885118595147837 19.8792787260975 15 16.355163202750337 30.663663274168474 36.492244975693204 16.488928547387985 16 23.01703856086713 28.651231593412458 32.82783796785035 15.503891877870066 17 23.494103488981086 27.336234934467708 27.40855605666824 21.761105519882975 18 22.597272319808763 29.61640252902285 30.832727236906265 16.95359791426212 19 25.140168349781394 30.157210194240907 26.379888653382345 18.32273280259535 20 24.588976323657132 31.971518119683655 27.10034986676824 16.33915568989097 21 25.81753241316129 26.72162853047748 31.961626297634666 15.499212758726557 22 23.31592755738488 22.534350480800015 33.079443234075804 21.070278727739296 23 19.543982899050878 27.298884071129176 33.185667447614385 19.971465582205557 24 18.997264767546287 29.922925877827378 32.67080016220946 18.40900919241687 25 21.209133640568126 29.762604479805088 30.03686653346227 18.99139534616452 26 19.219522926862904 33.10320823393626 26.45906427467907 21.21820456452177 27 17.719290612701922 32.3351759759247 32.16644037242505 17.779093038948332 28 16.199069429919106 30.599304863492854 33.60834787691125 19.59327782967678 29 18.232803416249514 29.380394326609082 32.82525213884998 19.561550118291414 30 20.607086977436794 28.460126516814455 32.19270911147632 18.74007739427243 31 23.42461446520952 28.306290213745445 28.844635184677443 19.424460136367593 32 25.064071096342243 28.291719272552946 28.394454669186274 18.249754961918537 33 23.173378603126967 28.17470024906048 27.650762039701917 21.001159108110638 34 18.931100381060894 29.12172933676359 30.281740435305842 21.665429846869667 35 18.859107618098506 30.1192026124261 29.446394533475402 21.575295235999995 36 23.04195281806107 29.403092158945572 28.430615230286545 19.124339792706813 37 19.259377529392257 32.55640801262213 28.512622950012233 19.671591507973382 38 20.672184196398227 31.707353112599307 26.323410864422115 21.29705182658035 39 19.48721779575727 29.940862501210823 27.825038705345197 22.74688099768671 40 22.025106347348252 27.702848023852017 29.19084895639225 21.081196672407483 41 18.738312463367425 27.222335323737585 29.635898858787467 24.403453354107526 42 19.231425949245512 28.04425954170901 29.341524801794154 23.382789707251323 43 20.104984657414597 27.761624327479232 29.002370753699374 23.13102026140679 44 20.40592589917073 29.033072342465548 29.62017866026147 20.94082309810225 45 19.79304338118075 30.431554337707627 26.94868894365191 22.826713337459715 46 21.16870440937203 29.885164565441176 28.045983427709253 20.900147597477545 47 20.01792841440249 29.060120934707406 28.97515798183845 21.94679266905165 48 19.168463065331995 29.84313458295914 30.047948657749522 20.94045369395934 49 21.42925746483683 27.69857935375618 29.879746638011852 20.992416543395137 50 19.221287857767912 29.443644524855973 29.235669992398485 22.09939762497763 51 17.760417607279066 30.576853300584972 29.103997937903987 22.558731154231975 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1975.0 1 2858.5 2 3742.0 3 14221.0 4 24700.0 5 16522.5 6 8345.0 7 8362.5 8 8380.0 9 9379.5 10 10379.0 11 11181.5 12 11984.0 13 12340.5 14 12697.0 15 12395.0 16 12093.0 17 11941.5 18 11790.0 19 11692.0 20 11594.0 21 12345.5 22 13097.0 23 14990.5 24 16884.0 25 18897.0 26 26636.0 27 32362.0 28 38632.5 29 44903.0 30 53389.0 31 61875.0 32 67750.5 33 73626.0 34 80288.5 35 86951.0 36 93307.0 37 99663.0 38 113514.5 39 127366.0 40 141841.5 41 156317.0 42 177319.0 43 198321.0 44 200801.5 45 203282.0 46 204563.0 47 205844.0 48 215647.5 49 225451.0 50 207349.5 51 189248.0 52 169677.0 53 150106.0 54 132614.5 55 115123.0 56 104943.0 57 94763.0 58 87856.0 59 80949.0 60 67552.0 61 54155.0 62 43552.5 63 32950.0 64 25394.0 65 17838.0 66 13381.0 67 8924.0 68 6481.5 69 4039.0 70 2964.5 71 1890.0 72 1370.5 73 851.0 74 651.0 75 314.5 76 178.0 77 168.5 78 159.0 79 150.0 80 141.0 81 82.0 82 23.0 83 16.0 84 9.0 85 16.5 86 24.0 87 13.5 88 3.0 89 2.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2436356.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.40991913074997 #Duplication Level Percentage of deduplicated Percentage of total 1 73.8932812245095 13.603693316489847 2 10.637781287727812 3.9168138647534856 3 4.169752502986186 2.3029441912565387 4 2.1531978499834925 1.5856079316280323 5 1.3256955451048924 1.2202973888688284 6 0.8652754470554542 0.9557790603668663 7 0.6079427868993568 0.7834524280057944 8 0.450163318278924 0.662997622811604 9 0.3661362173849536 0.6066484337606118 >10 3.2215414050837636 13.135446629842079 >50 0.9771509003533956 12.961900706985777 >100 1.3201113012663361 45.416522648167366 >500 0.008356564047913684 1.0641408117965057 >1k 0.0033877962356406825 1.0473011670195125 >5k 0.0 0.0 >10k+ 2.258530823760455E-4 0.7364537982471656 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17712 0.726987353243943 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 3745 0.15371316835470678 No Hit GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 3362 0.1379929698287114 No Hit TGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 2583 0.10601898901474169 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07018678715261645 0.0 2 0.0 0.0 0.0 0.2179073994112519 0.0 3 0.0 0.0 0.0 0.3164562157582882 0.0 4 0.0 0.0 0.0 0.4778447813045384 0.0 5 0.0 0.0 0.0 0.8696183973113946 0.0 6 0.0 0.0 0.0 1.2276531015992738 0.0 7 0.0 0.0 0.0 1.4939934886363078 0.0 8 0.0 0.0 0.0 2.0644766200013462 0.0 9 0.0 0.0 0.0 2.258085435790172 0.0 10 0.0 0.0 0.0 2.625724647793672 0.0 11 0.0 0.0 0.0 3.2639318720252706 0.0 12 0.0 0.0 0.0 3.746086368330408 0.0 13 0.0 0.0 0.0 3.922251099592999 0.0 14 0.0 0.0 0.0 3.997978948889243 0.0 15 0.0 0.0 0.0 4.108841236666563 0.0 16 0.0 0.0 0.0 4.346162876032895 0.0 17 0.0 0.0 0.0 4.666066863791663 0.0 18 0.0 0.0 0.0 5.025784409175014 0.0 19 0.0 0.0 0.0 5.2806322228771165 0.0 20 0.0 0.0 0.0 5.543360658294601 0.0 21 0.0 0.0 0.0 5.874305725435856 0.0 22 4.1044904767611955E-5 0.0 0.0 6.259717381203732 0.0 23 4.1044904767611955E-5 0.0 0.0 6.617834175301146 0.0 24 4.1044904767611955E-5 0.0 0.0 6.870876013193474 0.0 25 4.1044904767611955E-5 0.0 0.0 7.09370880117684 0.0 26 4.1044904767611955E-5 0.0 0.0 7.310384853445063 0.0 27 4.1044904767611955E-5 0.0 0.0 7.57528866881523 0.0 28 4.1044904767611955E-5 0.0 0.0 7.837278295946898 0.0 29 4.1044904767611955E-5 0.0 0.0 8.144991946989684 0.0 30 4.1044904767611955E-5 0.0 0.0 8.507952039849677 0.0 31 4.1044904767611955E-5 0.0 0.0 8.810740302320351 0.0 32 4.1044904767611955E-5 0.0 0.0 9.073961276595046 0.0 33 4.1044904767611955E-5 0.0 0.0 9.350152440776307 0.0 34 4.1044904767611955E-5 0.0 0.0 9.64711232676998 0.0 35 4.1044904767611955E-5 0.0 0.0 9.983926815293003 0.0 36 4.1044904767611955E-5 0.0 0.0 10.281379240143886 0.0 37 4.1044904767611955E-5 0.0 0.0 10.612939980856657 0.0 38 4.1044904767611955E-5 0.0 0.0 11.028191282390587 0.0 39 4.1044904767611955E-5 0.0 0.0 11.862100612554158 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGATA 45 3.8562575E-10 45.000004 32 GCCCCGA 25 3.8920964E-5 45.0 32 CGAACAC 40 6.8212103E-9 45.0 28 CTCCGAT 25 3.8920964E-5 45.0 18 GCGCGTT 35 1.2126839E-7 45.0 9 GCGCGAT 20 7.0348446E-4 45.0 9 TAGCGAA 20 7.0348446E-4 45.0 43 TCGATAG 100 0.0 45.0 1 TCCGTAC 25 3.8920964E-5 45.0 32 TACTCGC 55 1.8189894E-12 45.0 45 CGTCGCA 20 7.0348446E-4 45.0 42 GACGCGT 20 7.0348446E-4 45.0 9 ATACGCG 35 1.2126839E-7 45.0 1 TGTAACG 75 0.0 45.0 1 TCGCGTC 20 7.0348446E-4 45.0 20 AGTCGTC 25 3.8920964E-5 45.0 45 TAATCGC 35 1.2126839E-7 45.0 16 CGCGGGC 105 0.0 44.999996 4 GCGCATT 30 2.1665073E-6 44.999996 10 TATCGAT 30 2.1665073E-6 44.999996 12 >>END_MODULE