SRR1547564_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547564_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2128653
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8209	0.385642939455139	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	3262	0.15324244956787225	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACCGTA	55	1.8189894E-12	45.000004	9
TTAGCCG	55	1.8189894E-12	45.000004	1
AGTTCGC	45	3.8562575E-10	45.000004	15
CGCCGGT	90	0.0	45.000004	28
TCCGGCA	20	7.034643E-4	45.0	36
AACGTCG	25	3.89193E-5	45.0	22
AACCGTT	50	2.1827873E-11	45.0	29
TAATACG	85	0.0	45.0	1
AAATCCG	25	3.89193E-5	45.0	31
TCCGCGT	20	7.034643E-4	45.0	40
GTCGACT	50	2.1827873E-11	45.0	35
GATCGCG	20	7.034643E-4	45.0	9
CGAAACG	25	3.89193E-5	45.0	19
ACGCACT	20	7.034643E-4	45.0	10
CGCGCCA	20	7.034643E-4	45.0	10
ATTCGAC	25	3.89193E-5	45.0	37
CAATTCG	50	2.1827873E-11	45.0	29
TAAGTCG	35	1.2125747E-7	45.0	45
CGTTCGC	20	7.034643E-4	45.0	26
TCGATAG	165	0.0	45.0	1