SRR1547561_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547561_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2522055
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29142	1.155486299862612	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTACGC	30	2.1665364E-6	45.000004	8
CTACGCG	65	0.0	45.000004	1
CGCGCGA	25	3.8921367E-5	45.0	12
TAAGTCG	20	7.034892E-4	45.0	1
TAACGCG	40	6.8212103E-9	45.0	1
CCGTCGA	20	7.034892E-4	45.0	36
TCGTCGA	20	7.034892E-4	45.0	22
CTCGCCG	20	7.034892E-4	45.0	30
ATCGGTC	20	7.034892E-4	45.0	17
CGTCCGT	25	3.8921367E-5	45.0	16
GCGTCCA	40	6.8212103E-9	45.0	38
GCGTAAT	35	1.212702E-7	45.0	15
GTACGTA	35	1.212702E-7	45.0	35
CGACGGT	355	0.0	44.3662	28
CGTTTTT	12195	0.0	42.95203	1
CGTTAGG	245	0.0	42.2449	2
GCGCGAC	80	0.0	42.1875	9
TCGTAAG	75	0.0	42.0	1
TATCGCG	60	3.6379788E-12	41.250004	1
CGCGTAA	50	1.0822987E-9	40.5	31