##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547560_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1176727 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.338963922813022 31.0 31.0 33.0 30.0 34.0 2 31.739366055168276 31.0 31.0 34.0 30.0 34.0 3 31.889667696925454 31.0 31.0 34.0 30.0 34.0 4 35.619478434675166 37.0 35.0 37.0 33.0 37.0 5 35.5038789795764 37.0 35.0 37.0 33.0 37.0 6 35.541711883894905 37.0 35.0 37.0 33.0 37.0 7 35.915360997070685 37.0 35.0 37.0 35.0 37.0 8 35.84629909911135 37.0 35.0 37.0 35.0 37.0 9 37.499941787687376 39.0 37.0 39.0 35.0 39.0 10 37.08175898063017 39.0 37.0 39.0 33.0 39.0 11 36.784637388281226 39.0 35.0 39.0 32.0 39.0 12 36.10928193200292 38.0 35.0 39.0 32.0 39.0 13 35.762850686692836 38.0 35.0 39.0 31.0 39.0 14 36.79520483510619 39.0 35.0 41.0 31.0 41.0 15 37.09317454260844 39.0 35.0 41.0 32.0 41.0 16 37.20640811335169 39.0 35.0 41.0 32.0 41.0 17 37.14450590493802 39.0 35.0 41.0 32.0 41.0 18 37.0822586717225 38.0 35.0 41.0 32.0 41.0 19 37.085775205294006 38.0 35.0 41.0 32.0 41.0 20 36.95915705172058 38.0 35.0 41.0 32.0 41.0 21 36.78122283248366 38.0 35.0 41.0 31.0 41.0 22 36.70352001781212 38.0 35.0 41.0 31.0 41.0 23 36.6267732447713 38.0 35.0 40.0 31.0 41.0 24 36.57381023805861 38.0 35.0 40.0 31.0 41.0 25 36.49071874784891 38.0 35.0 40.0 31.0 41.0 26 36.48071472822498 38.0 35.0 40.0 31.0 41.0 27 36.44092470046154 38.0 35.0 40.0 31.0 41.0 28 36.41838251353118 38.0 35.0 40.0 31.0 41.0 29 36.41737038412478 38.0 35.0 40.0 31.0 41.0 30 36.362287089528834 38.0 35.0 40.0 31.0 41.0 31 36.199905330633186 38.0 35.0 40.0 30.0 41.0 32 36.02917754075499 38.0 35.0 40.0 30.0 41.0 33 35.93752671605224 38.0 35.0 40.0 30.0 41.0 34 35.877460107569554 38.0 35.0 40.0 30.0 41.0 35 35.77569053824719 38.0 35.0 40.0 30.0 41.0 36 35.68488867851252 38.0 35.0 40.0 29.0 41.0 37 35.64296306619972 38.0 35.0 40.0 29.0 41.0 38 35.565686008734396 38.0 34.0 40.0 29.0 41.0 39 35.532020596111074 38.0 35.0 40.0 29.0 41.0 40 35.440956993423285 37.0 34.0 40.0 28.0 41.0 41 35.416563909895835 37.0 34.0 40.0 28.0 41.0 42 35.39731390543431 37.0 34.0 40.0 28.0 41.0 43 35.3451905157271 37.0 34.0 40.0 28.0 41.0 44 35.21106849762094 37.0 34.0 40.0 27.0 41.0 45 35.13199323207507 37.0 34.0 40.0 27.0 41.0 46 35.094490905707104 37.0 34.0 40.0 27.0 41.0 47 35.04238876136946 37.0 34.0 40.0 27.0 41.0 48 34.95453575893134 37.0 34.0 40.0 27.0 41.0 49 34.92180769201352 36.0 34.0 40.0 27.0 41.0 50 34.79556090750021 36.0 34.0 40.0 27.0 41.0 51 34.3693872920397 36.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 4.0 13 7.0 14 14.0 15 20.0 16 80.0 17 213.0 18 430.0 19 836.0 20 1521.0 21 2402.0 22 3635.0 23 5534.0 24 8123.0 25 11389.0 26 14861.0 27 17975.0 28 20610.0 29 23642.0 30 28652.0 31 35360.0 32 44256.0 33 57966.0 34 101526.0 35 161519.0 36 84145.0 37 101762.0 38 154266.0 39 295862.0 40 114.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.6442292902262 23.700569460886 29.33671106382364 12.318490185064165 2 30.982377390847667 25.302300363635744 29.9721175769741 13.743204668542491 3 29.65930075540036 25.07616464991455 30.7908291387892 14.473705455895889 4 27.034987724425463 27.328853676341243 30.567582795329756 15.068575803903538 5 25.001210986065587 30.46484018808101 29.17456640325241 15.359382422600994 6 22.49765663573624 40.88832838882765 25.810489603790852 10.803525371645248 7 85.76390275739402 4.320203411666427 7.024229069274352 2.8916647616651954 8 85.09586335658143 4.43484342587533 7.185608896540999 3.2836843210022377 9 80.08314587835581 6.8524815016567135 9.208932913071596 3.855439706915878 10 45.65468456149982 30.021491815858738 14.407249939875605 9.916573682765842 11 36.56166638481143 23.754957606989556 24.2191264413921 15.464249566806915 12 37.24168817406247 21.509152080304098 25.309778733724986 15.939381011908454 13 23.21532521986833 34.62306890213278 25.99974335593557 16.161862522063316 14 15.564102803793913 39.25532430206836 27.38919052592487 17.79138236821285 15 14.704345187966283 30.019027352988413 39.48146001578956 15.795167443255743 16 17.82427020030984 25.016677615113785 40.45152359043346 16.707528594142907 17 18.593522541762024 25.869466749721898 27.53085465022898 28.006156058287097 18 21.077531152085403 28.918177283261116 31.065404295133874 18.938887269519608 19 25.358218176348462 29.84880945197994 25.59931063024814 19.19366174142346 20 27.483350003866658 27.5158979100505 26.463997171816402 18.536754914266435 21 23.37908452852701 30.249667085058814 28.02255748359645 18.34869090281773 22 22.53946752305335 24.52871396679094 27.037112261382635 25.89470624877308 23 18.644511428734106 31.266385491282172 27.727501790984654 22.361601288999065 24 19.1669775572414 27.29477610354823 34.99868703616047 18.5395593030499 25 18.426363973971874 28.600856443338174 31.6984313268923 21.274348255797648 26 17.07983245051741 36.63865960413928 25.563278483454532 20.718229461888782 27 17.233054055868525 36.394082909629844 28.870247729507355 17.502615304994276 28 14.909575458028923 31.990682630720634 35.059703737570395 18.040038173680045 29 16.260610999832586 27.797526529092988 34.30328359933952 21.638578871734907 30 19.31102116293754 31.749760139777532 30.51531918618337 18.423899511101556 31 26.64186340587069 29.342489804347142 24.880707249854893 19.134939539927274 32 26.026682484552495 30.47656763208459 25.515093985265914 17.98165589809701 33 24.521320578179985 30.02310646394618 24.99934139354328 20.456231564330555 34 20.294341848194186 29.58791631363944 26.43680309876462 23.680938739401746 35 19.376796827131525 29.09502373957596 29.596754387381267 21.931425045911244 36 26.240835809835243 28.190310921734607 27.58770725920286 17.981146009227288 37 19.151086020801767 31.82785811832311 29.53310326014445 19.487952600730672 38 18.806656089305335 33.905485299478975 25.945525172788592 21.342333438427094 39 19.22578474021587 31.959749372624234 27.98057663332277 20.833889253837125 40 22.96717930327085 28.236965753314063 27.737954512813936 21.05790043060115 41 16.700390149966815 27.02674452103164 29.658365959139203 26.614499369862337 42 21.46887085959615 26.781572956174205 26.43348882111144 25.31606736311821 43 22.516182598002764 26.7248903101569 25.587158278853124 25.17176881298721 44 18.42398449257984 31.225764344661084 28.100400517707165 22.24985064505191 45 18.65751359491199 35.62916462357029 23.819203604574383 21.894118176943337 46 22.16792849998343 33.61153436608491 25.216044163174633 19.004492970757024 47 20.350854531254914 29.314785842425646 27.093794907399932 23.24056471891951 48 20.58897263341455 26.939723487265947 31.82046472971216 20.650839149607343 49 21.42391565758243 27.204695736564215 30.422689374850755 20.948699231002603 50 18.645786150908407 30.72615823381294 29.80223960187877 20.82581601339988 51 17.766482795074815 31.93442489209477 27.138325202022216 23.1607671108082 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1558.0 1 2119.5 2 2681.0 3 6237.0 4 9793.0 5 6844.5 6 3896.0 7 4182.5 8 4469.0 9 5383.0 10 6297.0 11 6800.0 12 7303.0 13 7650.0 14 7997.0 15 7221.0 16 6445.0 17 6268.5 18 6092.0 19 5859.0 20 5626.0 21 5146.5 22 4667.0 23 5169.0 24 5671.0 25 7223.5 26 10843.0 27 12910.0 28 15554.0 29 18198.0 30 21287.0 31 24376.0 32 29034.0 33 33692.0 34 34198.0 35 34704.0 36 34240.0 37 33776.0 38 42190.0 39 50604.0 40 65599.0 41 80594.0 42 92157.0 43 103720.0 44 111708.5 45 119697.0 46 116888.0 47 114079.0 48 112342.0 49 110605.0 50 98565.0 51 86525.0 52 76934.5 53 67344.0 54 59503.0 55 51662.0 56 45884.0 57 40106.0 58 38000.0 59 35894.0 60 33520.0 61 31146.0 62 25658.5 63 20171.0 64 16021.0 65 11871.0 66 9177.5 67 6484.0 68 4823.0 69 3162.0 70 2598.0 71 2034.0 72 1559.0 73 1084.0 74 699.0 75 392.0 76 470.0 77 298.5 78 127.0 79 90.0 80 53.0 81 45.0 82 37.0 83 22.5 84 8.0 85 5.5 86 3.0 87 2.5 88 2.0 89 2.5 90 3.0 91 1.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1176727.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.476148028830732 #Duplication Level Percentage of deduplicated Percentage of total 1 75.73367008409801 13.235328291563263 2 10.238379165365554 3.5785485973844975 3 4.099919699022079 2.14952410699287 4 2.151692466442098 1.5041318422424803 5 1.288338815224745 1.1257599923078023 6 0.8378735062816665 0.8785680855128304 7 0.5815510343661889 0.7114290374032203 8 0.4143813567859169 0.5793431945262725 9 0.29305184890043107 0.4609275742355823 >10 2.1345764177561795 7.972795544181717 >50 0.6532506210127572 8.37984284069279 >100 1.5590389726800575 56.76389656619261 >500 0.008860973005443964 0.9839357586260622 >1k 0.004922762780802203 1.1239941144049577 >5k 4.922762780802202E-4 0.5519744537330432 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6416 0.5452411646881562 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 1717 0.14591319821844828 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1541 0.1309564580399702 No Hit GCCCTGCTAGAGGACTTGCGTCTGTATCTATGCTCTGCCCCATGCAGCTCC 1376 0.11693451412264698 No Hit CTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGCT 1329 0.11294038464316701 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1313 0.11158068099057811 No Hit GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 1295 0.11005101438141557 No Hit TGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 1193 0.10138290359616121 No Hit GCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC 1185 0.10070305176986674 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12347808795073113 0.0 2 0.0 0.0 0.0 0.4326407059581364 0.0 3 0.0 0.0 0.0 0.6095721437512694 0.0 4 0.0 0.0 0.0 0.9379405758514932 0.0 5 0.0 0.0 0.0 1.5830349775266481 0.0 6 0.0 0.0 0.0 2.1137443094277604 0.0 7 0.0 0.0 0.0 2.458004277967617 0.0 8 0.0 0.0 0.0 3.2491818408177937 0.0 9 0.0 0.0 0.0 3.4601058699256497 0.0 10 0.0 0.0 0.0 3.8987802608421496 0.0 11 0.0 0.0 0.0 4.648231917853503 0.0 12 0.0 0.0 0.0 5.183785194016964 0.0 13 0.0 0.0 0.0 5.391904834341355 0.0 14 0.0 0.0 0.0 5.471787423930954 0.0 15 0.0 0.0 0.0 5.604358530058374 0.0 16 0.0 0.0 0.0 5.92439877728649 0.0 17 0.0 0.0 0.0 6.286759800701437 0.0 18 0.0 0.0 0.0 6.694330970564965 0.0 19 0.0 0.0 0.0 6.938737702117823 0.0 20 0.0 0.0 0.0 7.180085100452357 0.0 21 0.0 0.0 0.0 7.495281403418125 0.0 22 0.0 0.0 0.0 7.819740687517156 0.0 23 0.0 0.0 0.0 8.165105415274741 0.0 24 0.0 0.0 0.0 8.413421294828792 0.0 25 0.0 0.0 0.0 8.641936489942017 0.0 26 0.0 0.0 0.0 8.854220222702462 0.0 27 0.0 0.0 0.0 9.061744992678845 0.0 28 0.0 0.0 0.0 9.271309318134113 0.0 29 0.0 0.0 0.0 9.512231809077212 0.0 30 0.0 0.0 0.0 9.802188612991799 0.0 31 0.0 0.0 0.0 10.068095658551218 0.0 32 0.0 0.0 0.0 10.305448927406271 0.0 33 0.0 0.0 0.0 10.534728955824079 0.0 34 0.0 0.0 0.0 10.790438223989081 0.0 35 0.0 0.0 0.0 11.117871859828151 0.0 36 0.0 0.0 0.0 11.37766023895092 0.0 37 0.0 0.0 0.0 11.644502080771495 0.0 38 0.0 0.0 0.0 11.91108897815721 0.0 39 0.0 0.0 0.0 12.205974707812432 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCCCG 30 2.165545E-6 45.000004 44 AACCGTA 30 2.165545E-6 45.000004 35 CTATGCG 60 0.0 45.000004 1 TCTTGCG 30 2.165545E-6 45.000004 30 GTTAGCG 30 2.165545E-6 45.000004 1 TCGGCCC 30 2.165545E-6 45.000004 14 ATCCGCG 30 2.165545E-6 45.000004 15 ATTCCGT 60 0.0 45.000004 39 CCGTAAA 30 2.165545E-6 45.000004 37 CGGATCA 30 2.165545E-6 45.000004 31 TACGACT 60 0.0 45.000004 19 CGCTAGC 30 2.165545E-6 45.000004 24 TCCCGAC 30 2.165545E-6 45.000004 28 ACGTACT 30 2.165545E-6 45.000004 30 ACCCGGT 30 2.165545E-6 45.000004 30 GCTCGCG 30 2.165545E-6 45.000004 22 TCGGTCA 30 2.165545E-6 45.000004 27 TCGCGGC 30 2.165545E-6 45.000004 12 CGCCCGA 30 2.165545E-6 45.000004 37 AATGTCG 30 2.165545E-6 45.000004 1 >>END_MODULE