##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547559_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1194012 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30140651852745 31.0 31.0 33.0 30.0 34.0 2 31.69869900805017 31.0 31.0 34.0 30.0 34.0 3 31.783209883987766 31.0 31.0 34.0 30.0 34.0 4 35.53747533525626 37.0 35.0 37.0 33.0 37.0 5 35.435652238000955 37.0 35.0 37.0 33.0 37.0 6 35.484696133707196 37.0 35.0 37.0 33.0 37.0 7 35.92280730846926 37.0 35.0 37.0 35.0 37.0 8 35.884429972228084 37.0 35.0 37.0 35.0 37.0 9 37.55893659360208 39.0 37.0 39.0 35.0 39.0 10 37.040569106508144 39.0 37.0 39.0 33.0 39.0 11 36.71878758337437 39.0 35.0 39.0 32.0 39.0 12 36.10534148735523 37.0 35.0 39.0 32.0 39.0 13 35.843938754384375 38.0 35.0 39.0 31.0 39.0 14 36.84711962693842 39.0 35.0 41.0 31.0 41.0 15 37.12280948600181 39.0 35.0 41.0 32.0 41.0 16 37.25161974921525 39.0 35.0 41.0 32.0 41.0 17 37.213606730920624 39.0 35.0 41.0 32.0 41.0 18 37.168810698719945 39.0 35.0 41.0 32.0 41.0 19 37.11989494242939 38.0 35.0 41.0 32.0 41.0 20 36.95135727279123 38.0 35.0 41.0 32.0 41.0 21 36.79864021467121 38.0 35.0 41.0 32.0 41.0 22 36.71131780920125 38.0 35.0 41.0 31.0 41.0 23 36.64458397403041 38.0 35.0 40.0 31.0 41.0 24 36.52263126333739 38.0 35.0 40.0 31.0 41.0 25 36.437900121606816 38.0 35.0 40.0 31.0 41.0 26 36.3898068026117 38.0 35.0 40.0 31.0 41.0 27 36.32523877481968 38.0 35.0 40.0 31.0 41.0 28 36.284354763603716 38.0 35.0 40.0 31.0 41.0 29 36.25280315440716 37.0 35.0 40.0 31.0 41.0 30 36.13385543863881 37.0 35.0 40.0 31.0 41.0 31 35.99129405734616 37.0 35.0 40.0 30.0 41.0 32 35.78817884577374 37.0 35.0 40.0 30.0 41.0 33 35.657443978787484 37.0 35.0 40.0 30.0 41.0 34 35.61035483730482 37.0 35.0 40.0 30.0 41.0 35 35.488815020284555 37.0 35.0 40.0 29.0 41.0 36 35.37016378394857 37.0 35.0 40.0 29.0 41.0 37 35.28653145864531 37.0 34.0 40.0 28.0 41.0 38 35.197505552708016 37.0 34.0 40.0 27.0 41.0 39 35.18362462018807 37.0 34.0 40.0 27.0 41.0 40 35.07783925119681 36.0 34.0 40.0 27.0 41.0 41 35.03529864021467 36.0 34.0 40.0 27.0 41.0 42 34.991759714307726 36.0 34.0 40.0 27.0 41.0 43 34.95140082344231 36.0 34.0 40.0 27.0 41.0 44 34.835984060461705 36.0 34.0 40.0 26.0 41.0 45 34.775199076726196 36.0 34.0 40.0 26.0 41.0 46 34.71511006589549 36.0 34.0 40.0 26.0 41.0 47 34.62684880888969 35.0 34.0 40.0 26.0 41.0 48 34.538417536842175 35.0 34.0 40.0 25.0 41.0 49 34.51652077198554 36.0 34.0 40.0 26.0 41.0 50 34.3493038595927 35.0 34.0 40.0 25.0 41.0 51 33.9313641738944 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 0.0 10 3.0 11 1.0 12 4.0 13 5.0 14 12.0 15 29.0 16 73.0 17 182.0 18 410.0 19 801.0 20 1469.0 21 2489.0 22 3903.0 23 5845.0 24 8737.0 25 12462.0 26 15995.0 27 18631.0 28 21535.0 29 25163.0 30 30126.0 31 36943.0 32 46582.0 33 60604.0 34 102782.0 35 170375.0 36 109168.0 37 108432.0 38 144356.0 39 266798.0 40 95.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.26241612312104 25.61197039895746 29.545096699195657 13.580516778725842 2 30.332274717507023 26.503251223605794 29.86176018331474 13.302713875572438 3 28.51755258741118 24.566587270479694 33.575793208108465 13.340066934000664 4 26.047644412283965 27.404833452260114 32.91030575907109 13.637216376384828 5 23.651521090240298 31.099184932814744 30.849019942848145 14.40027403409681 6 20.223079835043535 41.32186276184829 27.356006472296762 11.099050930811416 7 85.25500581233689 4.2015490631584935 8.358877465218105 2.184567659286506 8 85.19336489080511 3.5599307209642785 8.036351393453332 3.210352994777272 9 81.32338703463617 5.24383339530926 10.041858875790192 3.3909206942643793 10 47.3703781871539 24.71616700669675 16.294894858678138 11.618559947471214 11 36.36261612111101 25.41121864771878 22.512671564439888 15.713493666730319 12 32.89514678244439 25.168088762927006 25.637263277085992 16.299501177542606 13 21.691323035279378 37.15046414943903 26.778709091700918 14.379503723580667 14 15.208306114176406 41.57872785198139 27.03641169435483 16.176554339487375 15 14.150611551642697 31.9372837123915 39.848008227723 14.064096508242798 16 16.648995152477532 28.63781938539981 38.89667775533244 15.816507706790217 17 16.99974539619367 30.09567743037758 25.778300385590764 27.126276787837977 18 19.28129700539023 32.48074558714652 30.969202989584694 17.268754417878547 19 23.761067727962534 34.47561666046907 24.25344133894802 17.509874272620376 20 25.510128876426702 32.65997326660033 24.38836460605086 17.4415332509221 21 20.674666586265463 35.11045115124471 27.07627729034549 17.138604972144332 22 20.231371208999573 30.23051694622835 25.70987561264041 23.82823623213167 23 17.573273970445857 34.996633199666334 25.841951337172492 21.588141492715316 24 17.50803174507459 32.818765640546324 32.395403061275765 17.277799553103318 25 16.995641584841696 32.834510875937596 30.805469291765913 19.3643782474548 26 15.313665189294582 40.884597474732246 25.63374572449858 18.16799161147459 27 17.82821278178109 39.60554835294788 26.975440782839705 15.59079808243133 28 14.92129057329407 35.11983129147781 33.91481827653323 16.044059858694887 29 15.324469100813056 32.12153646697018 33.33827465720612 19.215719775010637 30 19.459017162306576 37.61402732970858 27.412371064947422 15.514584443037425 31 26.199401681055136 33.713480266529984 22.27515301353755 17.811965038877332 32 25.091205113516445 35.406260573595574 23.11065550429979 16.39187880858819 33 24.257210145291673 34.79797522972968 23.3286600134672 17.61615461151144 34 17.977290010485657 35.08021694924339 24.460725687849035 22.48176735242192 35 19.44888326080475 33.813060505254555 27.40943977112458 19.32861646281612 36 26.851991437271987 34.40610312124166 23.524051684572683 15.217853756913666 37 19.70532959467744 36.455663762173245 26.299986934804675 17.53901970834464 38 18.255595421151547 38.600700830477415 23.87346190825553 19.27024184011551 39 18.897297514597845 37.807408970764115 26.001999979899697 17.293293534738343 40 22.834527626188013 33.35200986254744 24.067597310579796 19.74586520068475 41 18.920831616432665 31.15739205301119 25.6599598664 24.261816464156137 42 20.99652264801359 32.64858309631729 23.638958402428116 22.715935853241007 43 20.999621444340594 31.495412106410992 25.72964090813158 21.77532554111684 44 18.336164125653678 35.6843984817573 26.218413215277568 19.76102417731145 45 18.894868728287488 38.1677906084696 22.872634445884966 20.06470621735795 46 22.52799804357075 36.23263417788095 23.23309983484253 18.00626794370576 47 20.08522527411785 32.97353795439242 25.59044632717259 21.35079044431714 48 20.013617953588405 31.677403577183476 28.681202533977885 19.627775935250234 49 20.761767888429933 29.71938305477667 29.402300814397176 20.116548242396224 50 18.876359701577538 33.98717935833141 27.615802856252703 19.520658083838356 51 16.805861247625653 35.44796869713202 25.322274818008527 22.423895237233797 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1894.0 1 2202.5 2 2511.0 3 11089.5 4 19668.0 5 12583.5 6 5499.0 7 6450.5 8 7402.0 9 10446.0 10 13490.0 11 16424.5 12 19359.0 13 19680.0 14 20001.0 15 18264.5 16 16528.0 17 14542.5 18 12557.0 19 10630.0 20 8703.0 21 7618.5 22 6534.0 23 7049.5 24 7565.0 25 7446.5 26 9066.5 27 10805.0 28 12547.5 29 14290.0 30 17153.5 31 20017.0 32 21589.5 33 23162.0 34 25776.0 35 28390.0 36 31721.0 37 35052.0 38 40839.0 39 46626.0 40 59575.0 41 72524.0 42 87075.5 43 101627.0 44 107905.5 45 114184.0 46 120742.0 47 127300.0 48 129788.0 49 132276.0 50 118884.0 51 105492.0 52 86692.0 53 67892.0 54 59357.5 55 50823.0 56 43308.5 57 35794.0 58 29358.5 59 22923.0 60 19855.0 61 16787.0 62 12756.5 63 8726.0 64 6673.5 65 4621.0 66 3909.5 67 3198.0 68 2057.0 69 916.0 70 860.5 71 805.0 72 569.0 73 333.0 74 232.0 75 171.0 76 211.0 77 122.0 78 33.0 79 21.5 80 10.0 81 9.0 82 8.0 83 8.5 84 9.0 85 5.5 86 2.0 87 2.0 88 2.0 89 2.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1194012.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.554217366600888 #Duplication Level Percentage of deduplicated Percentage of total 1 72.02124615072746 16.243828406969747 2 11.198728033552129 5.051570925963633 3 5.029866796890786 3.4033412718637 4 2.7326470914314025 2.465308659454142 5 1.7967631995330875 2.026229387928927 6 1.126593624688463 1.5245662497030223 7 0.7808487110528107 1.2328002091660655 8 0.5365798306003824 0.9681710507115925 9 0.4152490588938339 0.8429055782011184 >10 2.882412661813765 13.551784883104926 >50 0.5939551779851593 9.688812235685486 >100 0.8738391662751102 39.41633074550024 >500 0.007889347588898237 1.1420234181335036 >1k 0.003005465748151709 1.0095019293398546 >5k 0.0 0.0 >10k+ 3.7568321851896364E-4 1.4328250482740426 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16910 1.4162336726934068 No Hit CCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGC 2069 0.1732813405560413 No Hit CTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGCT 2060 0.17252757928731033 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGC 1736 0.1453921736129955 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1526 0.12780441067593962 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCC 1275 0.10678284640355373 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.375125208121862E-5 0.0 0.0 0.1867652921411175 0.0 2 8.375125208121862E-5 0.0 0.0 0.6814001869327947 0.0 3 8.375125208121862E-5 0.0 0.0 0.9875947645417299 0.0 4 8.375125208121862E-5 0.0 0.0 1.4056810149311731 0.0 5 8.375125208121862E-5 0.0 0.0 2.523090220198792 0.0 6 8.375125208121862E-5 0.0 0.0 3.5867311216302684 0.0 7 8.375125208121862E-5 0.0 0.0 4.408247153294941 0.0 8 8.375125208121862E-5 0.0 0.0 6.0558855354887555 0.0 9 8.375125208121862E-5 0.0 0.0 6.5905535287752555 0.0 10 8.375125208121862E-5 0.0 0.0 7.48225310968399 0.0 11 8.375125208121862E-5 0.0 0.0 8.916242047818615 0.0 12 8.375125208121862E-5 0.0 0.0 9.877287665450599 0.0 13 8.375125208121862E-5 0.0 0.0 10.21689899263994 0.0 14 8.375125208121862E-5 0.0 0.0 10.341772109493037 0.0 15 8.375125208121862E-5 0.0 0.0 10.530044924171616 0.0 16 8.375125208121862E-5 0.0 0.0 10.990509308114156 0.0 17 8.375125208121862E-5 0.0 0.0 11.550051423268778 0.0 18 8.375125208121862E-5 0.0 0.0 12.107332254617207 0.0 19 8.375125208121862E-5 0.0 0.0 12.461767553424924 0.0 20 8.375125208121862E-5 0.0 0.0 12.787811177777108 0.0 21 8.375125208121862E-5 0.0 0.0 13.227672753707667 0.0 22 8.375125208121862E-5 0.0 0.0 13.683195813777417 0.0 23 8.375125208121862E-5 0.0 0.0 14.172973135948382 0.0 24 8.375125208121862E-5 0.0 0.0 14.519870822068789 0.0 25 1.6750250416243723E-4 0.0 0.0 14.807640124219857 0.0 26 1.6750250416243723E-4 0.0 0.0 15.076732897156813 0.0 27 1.6750250416243723E-4 0.0 0.0 15.328405409660874 0.0 28 1.6750250416243723E-4 0.0 0.0 15.593561873750012 0.0 29 1.6750250416243723E-4 0.0 0.0 15.890292559873771 0.0 30 1.6750250416243723E-4 0.0 0.0 16.235766474708797 0.0 31 1.6750250416243723E-4 0.0 0.0 16.560721332783924 0.0 32 1.6750250416243723E-4 0.0 0.0 16.84438682358301 0.0 33 1.6750250416243723E-4 0.0 0.0 17.13542242456525 0.0 34 1.6750250416243723E-4 0.0 0.0 17.441198245913775 0.0 35 1.6750250416243723E-4 0.0 0.0 17.795884798477736 0.0 36 1.6750250416243723E-4 0.0 0.0 18.097389305970125 0.0 37 1.6750250416243723E-4 0.0 0.0 18.398307554697944 0.0 38 1.6750250416243723E-4 0.0 0.0 18.711872242490024 0.0 39 1.6750250416243723E-4 0.0 0.0 19.098216768340688 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTCACG 35 1.2119744E-7 45.000004 26 CTAGACG 70 0.0 45.000004 1 AGCCGTA 25 3.8908962E-5 45.000004 31 CCTTACG 25 3.8908962E-5 45.000004 1 TCCGCTG 50 2.1827873E-11 45.000004 34 TCACCGA 25 3.8908962E-5 45.000004 14 CTCGTCC 35 1.2119744E-7 45.000004 37 TTAGCCG 25 3.8908962E-5 45.000004 29 GCGCGCG 35 1.2119744E-7 45.000004 1 CTTTTCG 25 3.8908962E-5 45.000004 32 TTTCGCA 25 3.8908962E-5 45.000004 21 CGCATAC 35 1.2119744E-7 45.000004 42 CACGCTT 25 3.8908962E-5 45.000004 28 GGTCCGA 25 3.8908962E-5 45.000004 8 CGCGCGT 25 3.8908962E-5 45.000004 39 CGCGCAT 25 3.8908962E-5 45.000004 12 GCGCATT 25 3.8908962E-5 45.000004 13 GCGCATC 25 3.8908962E-5 45.000004 44 CCTAACG 25 3.8908962E-5 45.000004 41 CCTCGCG 25 3.8908962E-5 45.000004 1 >>END_MODULE