SRR1547557_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547557_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2812206
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8157	0.29005698729040474	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAACGG	105	0.0	45.000004	2
CTATACG	30	2.1666274E-6	45.000004	1
TAAGCGT	30	2.1666274E-6	45.000004	37
TACCGAA	60	0.0	45.000004	16
GTACCGT	25	3.892251E-5	45.0	39
CGAACCG	40	6.8212103E-9	45.0	5
CGCATTA	50	2.1827873E-11	45.0	37
TAGCGAT	20	7.035031E-4	45.0	1
CGTACAC	20	7.035031E-4	45.0	30
CCGCGAC	20	7.035031E-4	45.0	12
TATCGCG	45	3.8562575E-10	45.0	1
ACGACGT	25	3.892251E-5	45.0	15
CTTACGT	20	7.035031E-4	45.0	35
TTAGTCG	55	1.8189894E-12	44.999996	1
GCGTAAG	115	0.0	43.043476	1
CGATAGA	90	0.0	42.5	10
CCGTCGC	75	0.0	42.0	24
GGACGTA	65	0.0	41.53846	8
CGGTCTA	825	0.0	40.909092	31
CACGCGA	55	6.184564E-11	40.90909	42