##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547557_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2812206 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.378592820013896 31.0 31.0 33.0 30.0 34.0 2 31.79706607552932 31.0 31.0 34.0 30.0 34.0 3 31.966200200127588 33.0 31.0 34.0 30.0 34.0 4 35.69554861912676 37.0 35.0 37.0 33.0 37.0 5 35.59416664355314 37.0 35.0 37.0 33.0 37.0 6 35.63598470382326 37.0 35.0 37.0 33.0 37.0 7 35.95840454077688 37.0 35.0 37.0 35.0 37.0 8 35.89088921650832 37.0 35.0 37.0 35.0 37.0 9 37.51765553448076 39.0 37.0 39.0 35.0 39.0 10 37.041640619499425 39.0 37.0 39.0 33.0 39.0 11 36.87479544528388 39.0 37.0 39.0 33.0 39.0 12 36.53320347086949 39.0 35.0 39.0 32.0 39.0 13 36.39434735577692 39.0 35.0 39.0 32.0 39.0 14 37.42217319783828 40.0 36.0 41.0 32.0 41.0 15 37.63196472804624 40.0 36.0 41.0 32.0 41.0 16 37.69804879158924 40.0 36.0 41.0 33.0 41.0 17 37.626775918976065 40.0 36.0 41.0 32.0 41.0 18 37.562675707256155 39.0 36.0 41.0 32.0 41.0 19 37.572776318662285 39.0 36.0 41.0 32.0 41.0 20 37.46408762373738 39.0 35.0 41.0 32.0 41.0 21 37.33067065499469 39.0 35.0 41.0 32.0 41.0 22 37.288560297503096 39.0 35.0 41.0 32.0 41.0 23 37.20970832150987 39.0 35.0 41.0 32.0 41.0 24 37.14695509503927 39.0 35.0 41.0 32.0 41.0 25 37.08394761976896 39.0 35.0 41.0 32.0 41.0 26 37.113908796155044 39.0 35.0 41.0 32.0 41.0 27 37.09089092335341 39.0 35.0 41.0 32.0 41.0 28 37.03192440383101 39.0 35.0 41.0 31.0 41.0 29 36.99885001312137 39.0 35.0 41.0 31.0 41.0 30 36.91407635144794 39.0 35.0 41.0 31.0 41.0 31 36.79546164114578 39.0 35.0 41.0 31.0 41.0 32 36.71094507301385 39.0 35.0 41.0 30.0 41.0 33 36.60832421237989 39.0 35.0 41.0 30.0 41.0 34 36.548610236945656 39.0 35.0 41.0 30.0 41.0 35 36.47862140966914 39.0 35.0 41.0 30.0 41.0 36 36.42350702615669 39.0 35.0 41.0 30.0 41.0 37 36.38489961261728 39.0 35.0 41.0 30.0 41.0 38 36.25996957548629 39.0 35.0 41.0 30.0 41.0 39 36.21799541000908 39.0 35.0 41.0 30.0 41.0 40 36.13290207047421 39.0 35.0 41.0 29.0 41.0 41 36.07317564929454 39.0 35.0 41.0 29.0 41.0 42 36.0608817419492 39.0 35.0 41.0 29.0 41.0 43 36.05176896713825 38.0 35.0 41.0 29.0 41.0 44 35.93570812380032 38.0 35.0 40.0 29.0 41.0 45 35.871410558117006 38.0 35.0 40.0 29.0 41.0 46 35.83651837738772 38.0 35.0 40.0 29.0 41.0 47 35.80636055822369 38.0 35.0 40.0 29.0 41.0 48 35.71227072269954 38.0 35.0 40.0 28.0 41.0 49 35.648737325786236 38.0 35.0 40.0 28.0 41.0 50 35.56535332048932 38.0 34.0 40.0 28.0 41.0 51 35.12148256564419 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 4.0 11 6.0 12 11.0 13 14.0 14 29.0 15 74.0 16 175.0 17 424.0 18 886.0 19 1909.0 20 3202.0 21 5052.0 22 7534.0 23 10939.0 24 16016.0 25 22980.0 26 30312.0 27 37070.0 28 42980.0 29 50628.0 30 60831.0 31 75343.0 32 94153.0 33 120907.0 34 195862.0 35 259938.0 36 200585.0 37 269082.0 38 434493.0 39 870514.0 40 248.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.032924330578915 24.448173426839997 28.22332361142818 12.295578631152908 2 32.01774692181156 26.402973324144817 28.02440504002907 13.55487471401455 3 31.231211369295135 25.54706163062023 29.56362371746593 13.6581032826187 4 28.81631004272091 26.79302298622505 29.40168678965908 14.988980181394961 5 25.356606166120123 30.91231581185731 27.98913024152569 15.741947780496876 6 23.06715795357808 40.796797958613276 25.44351302856192 10.692531059246727 7 87.46891230585526 4.265690351275831 5.934558136921691 2.330839205947217 8 86.82379598080652 4.322300713390129 6.3379780855314305 2.5159252202719147 9 81.15447445884121 6.811343123512289 8.335164635876604 3.699017781769899 10 36.95461854501413 35.51521474600367 18.309789538888687 9.220377170093514 11 30.61073762021701 25.956135503586864 26.43935046010143 16.993776416094697 12 30.312110848209556 23.29036350822095 29.013023939213557 17.38450170435594 13 26.367911881277546 26.800668229852292 27.89632053981821 18.935099349051953 14 18.911630229079947 31.43994429995527 30.381202515036236 19.26722295592855 15 19.038007884201942 29.830033788420906 34.530827400268684 16.60113092710847 16 23.14581506475699 29.188082238641123 31.928279791736454 15.737822904865434 17 22.821123345871534 28.018502200763386 26.99517745143848 22.1651970019266 18 22.73300746815845 29.455594647049328 29.578060782175985 18.233337102616236 19 25.941449523968018 29.43397460925693 26.78505770914364 17.839518157631414 20 26.311728230435467 29.981978560603313 27.42466234692622 16.281630862035 21 25.870793249143198 27.032976958302484 30.356062109248043 16.74016768330627 22 24.975090729484258 24.045322426593216 30.70781443464668 20.271772409275847 23 21.522889859419973 27.53336704352384 30.69654214520558 20.247200951850612 24 20.338090452833114 27.916198173249047 32.4181087729704 19.32760260094744 25 21.03458992691147 29.5162587662497 29.76844512813073 19.680706178708103 26 20.067377709883274 32.784760433623994 26.504886199659627 20.642975656833105 27 19.428235342645593 32.29144664366693 29.723640444547804 18.55667756913967 28 17.575170524492158 31.010886115739744 32.178368156529075 19.235575203239023 29 19.11609604701789 29.130796250345814 31.917043061568034 19.83606464106826 30 20.920053509593536 28.93842058512072 30.158281434574853 19.983244470710893 31 23.58436757477937 28.82039935907967 28.149004731516825 19.446228334624134 32 24.535471441281327 28.325485401851786 27.40126434549958 19.737778811367303 33 23.472889254912335 27.613410966337458 28.10683143411258 20.80686834463763 34 19.487797124392735 28.587699478629947 30.24109898065789 21.68340441631943 35 20.63973976301878 29.087093904216122 28.813216385997325 21.45994994676777 36 23.14311256003294 29.171582736115347 28.482337353664704 19.202967350187006 37 20.82717268934068 31.34997934006257 28.74078214753827 19.082065823058482 38 20.141376556340468 31.660945179691673 27.95730469247274 20.24037357149512 39 21.000381906588636 29.06842528605657 28.214327115438913 21.716865691915885 40 21.556706727743276 27.74590481636125 29.137268037974458 21.56012041792102 41 18.827283634271456 27.779863921775288 29.72250254782189 23.670349896131366 42 19.59714188789868 28.35962230362925 29.3318839373787 22.71135187109337 43 21.054360882524254 27.653095114653762 28.250490895759416 23.042053107062568 44 20.526554598062873 29.086880548580012 28.737475135178574 21.64908971817854 45 20.27931097508504 30.188115664357447 27.595097940904758 21.937475419652756 46 20.67152975279905 30.219798976319655 28.034112721472038 21.074558549409254 47 20.067519946974013 28.764642419509805 29.216174064062162 21.951663569454016 48 19.92688302350539 28.55964321248159 30.362640574694744 21.15083318931828 49 20.99426571168684 27.44126852727005 30.14811148258698 21.41635427845613 50 19.626727202772486 29.420319848545944 29.246577242207717 21.70637570647385 51 18.654287772659615 29.671403872973745 29.207284245890946 22.467024108475695 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1443.0 1 3425.0 2 5407.0 3 10651.0 4 15895.0 5 12093.5 6 8292.0 7 8307.5 8 8323.0 9 8428.0 10 8533.0 11 8613.0 12 8693.0 13 8843.5 14 8994.0 15 8680.5 16 8367.0 17 8578.0 18 8789.0 19 9224.5 20 9660.0 21 11954.0 22 14248.0 23 16094.5 24 17941.0 25 21325.0 26 32780.0 27 40851.0 28 49299.5 29 57748.0 30 65341.5 31 72935.0 32 85339.0 33 97743.0 34 101074.5 35 104406.0 36 116872.0 37 129338.0 38 139853.0 39 150368.0 40 168570.5 41 186773.0 42 198705.0 43 210637.0 44 219566.0 45 228495.0 46 230171.5 47 231848.0 48 230011.5 49 228175.0 50 221010.0 51 213845.0 52 196468.5 53 179092.0 54 158545.5 55 137999.0 56 128140.5 57 118282.0 58 105905.0 59 93528.0 60 82389.5 61 71251.0 62 59029.5 63 46808.0 64 37015.0 65 27222.0 66 22146.0 67 17070.0 68 12964.0 69 8858.0 70 6170.5 71 3483.0 72 3146.5 73 2810.0 74 2577.0 75 1442.0 76 540.0 77 391.5 78 243.0 79 163.0 80 83.0 81 90.0 82 97.0 83 54.0 84 11.0 85 11.5 86 12.0 87 10.0 88 8.0 89 5.5 90 3.0 91 2.5 92 2.0 93 3.0 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2812206.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.822513889350109 #Duplication Level Percentage of deduplicated Percentage of total 1 76.76119083067499 11.377938172507344 2 9.96675849373305 2.954648324103126 3 3.562812860423524 1.5842952932634866 4 1.8073922194147785 1.071603851031155 5 0.9785228755447706 0.7252084456904586 6 0.6616932746376375 0.5884774652283563 7 0.45471548979296805 0.4718018664211235 8 0.3449722062265454 0.40906842545861755 9 0.26940099654971184 0.3593880011846578 >10 2.3280985153781115 7.764320248154287 >50 0.8793785636973146 9.617555546773364 >100 1.972178386162023 60.88620122469721 >500 0.007293559112061339 0.754239628126979 >1k 0.0053486100155116486 1.1413054592646705 >5k 2.4311863706871127E-4 0.2939480480951633 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8157 0.29005698729040474 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.5559272684860216E-5 0.0 0.0 0.04690268067133062 0.0 2 3.5559272684860216E-5 0.0 0.0 0.15912774526474946 0.0 3 3.5559272684860216E-5 0.0 0.0 0.22597917791228667 0.0 4 3.5559272684860216E-5 0.0 0.0 0.35349472976019536 0.0 5 3.5559272684860216E-5 0.0 0.0 0.6194780894429498 0.0 6 3.5559272684860216E-5 0.0 0.0 0.841759102996011 0.0 7 3.5559272684860216E-5 0.0 0.0 0.9852763275521068 0.0 8 3.5559272684860216E-5 0.0 0.0 1.3121371620713418 0.0 9 3.5559272684860216E-5 0.0 0.0 1.4038445263255963 0.0 10 3.5559272684860216E-5 0.0 0.0 1.6155288766185691 0.0 11 3.5559272684860216E-5 0.0 0.0 1.9731840412828932 0.0 12 3.5559272684860216E-5 0.0 0.0 2.2496573864076814 0.0 13 3.5559272684860216E-5 0.0 0.0 2.357366423370123 0.0 14 3.5559272684860216E-5 0.0 0.0 2.403664596405811 0.0 15 3.5559272684860216E-5 0.0 0.0 2.4921005075730585 0.0 16 3.5559272684860216E-5 0.0 0.0 2.679426756076902 0.0 17 3.5559272684860216E-5 0.0 0.0 2.9001076023591446 0.0 18 3.5559272684860216E-5 0.0 0.0 3.1440797722499703 0.0 19 3.5559272684860216E-5 0.0 0.0 3.30306528042398 0.0 20 3.5559272684860216E-5 0.0 0.0 3.485270993661204 0.0 21 3.5559272684860216E-5 0.0 0.0 3.7064496697610347 0.0 22 3.5559272684860216E-5 0.0 0.0 3.9499240098342723 0.0 23 3.5559272684860216E-5 0.0 0.0 4.181592671376137 0.0 24 3.5559272684860216E-5 0.0 0.0 4.361238116980051 0.0 25 3.5559272684860216E-5 0.0 0.0 4.527726631690566 0.0 26 3.5559272684860216E-5 0.0 0.0 4.684080753685897 0.0 27 3.5559272684860216E-5 0.0 0.0 4.864437384743508 0.0 28 3.5559272684860216E-5 0.0 0.0 5.042838255803451 0.0 29 3.5559272684860216E-5 0.0 0.0 5.2495443079205435 0.0 30 3.5559272684860216E-5 0.0 0.0 5.481604121461941 0.0 31 3.5559272684860216E-5 0.0 0.0 5.690159255758647 0.0 32 3.5559272684860216E-5 0.0 0.0 5.888864471521646 0.0 33 3.5559272684860216E-5 0.0 0.0 6.095997234910956 0.0 34 3.5559272684860216E-5 0.0 0.0 6.308606126293736 0.0 35 3.5559272684860216E-5 0.0 0.0 6.5414482438342 0.0 36 3.5559272684860216E-5 0.0 0.0 6.770129926470536 0.0 37 3.5559272684860216E-5 0.0 0.0 7.0103683727294515 0.0 38 3.5559272684860216E-5 0.0 0.0 7.283925857494081 0.0 39 7.111854536972043E-5 0.0 0.0 7.719491388610934 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGG 105 0.0 45.000004 2 CTATACG 30 2.1666274E-6 45.000004 1 TAAGCGT 30 2.1666274E-6 45.000004 37 TACCGAA 60 0.0 45.000004 16 GTACCGT 25 3.892251E-5 45.0 39 CGAACCG 40 6.8212103E-9 45.0 5 CGCATTA 50 2.1827873E-11 45.0 37 TAGCGAT 20 7.035031E-4 45.0 1 CGTACAC 20 7.035031E-4 45.0 30 CCGCGAC 20 7.035031E-4 45.0 12 TATCGCG 45 3.8562575E-10 45.0 1 ACGACGT 25 3.892251E-5 45.0 15 CTTACGT 20 7.035031E-4 45.0 35 TTAGTCG 55 1.8189894E-12 44.999996 1 GCGTAAG 115 0.0 43.043476 1 CGATAGA 90 0.0 42.5 10 CCGTCGC 75 0.0 42.0 24 GGACGTA 65 0.0 41.53846 8 CGGTCTA 825 0.0 40.909092 31 CACGCGA 55 6.184564E-11 40.90909 42 >>END_MODULE