SRR1547556_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547556_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2342281
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8223	0.3510680400857113	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCTTCGT	50	2.1827873E-11	45.000004	29
GTTTCGA	30	2.166471E-6	45.000004	43
TCGACGA	30	2.166471E-6	45.000004	32
TATCCGT	30	2.166471E-6	45.000004	33
TCGTTAC	20	7.034789E-4	45.0	41
GTCGACG	20	7.034789E-4	45.0	1
GCGCGTT	20	7.034789E-4	45.0	3
AGCCCGT	20	7.034789E-4	45.0	18
TAGCGTC	20	7.034789E-4	45.0	22
CCGGATA	20	7.034789E-4	45.0	39
CGCGATT	20	7.034789E-4	45.0	43
CCCGTAT	45	3.8562575E-10	45.0	33
TATCTCG	55	1.8189894E-12	45.0	20
CGCTATC	20	7.034789E-4	45.0	45
CGAATCG	20	7.034789E-4	45.0	15
CTCGCTA	40	6.8193913E-9	45.0	13
CGTCGGA	20	7.034789E-4	45.0	23
ACCGTCT	45	3.8562575E-10	45.0	30
ACGTACG	20	7.034789E-4	45.0	38
ATACGTA	35	1.2126475E-7	45.0	45